Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078800

Identifier: 170078800

GI number: 170078800

Start: 2292300

End: 2292797

Strand: Reverse

Name: 170078800

Synonym: SYNPCC7002_A2202

Alternate gene names: NA

Gene position: 2292797-2292300 (Counterclockwise)

Preceding gene: 170078803

Following gene: 170078798

Centisome position: 76.22

GC content: 51.61

Gene sequence:

>498_bases
ATGAAGGTTTTAGCGCGCATTGTTGTTTTAGGTTTCGTCATTTTCGGGCTTTGTTGGGGGACACCGGCTTACGGGGCCAG
TCCTGCGGCTACATCTCGGTCGGCGATCGACAGTGAAGATCTCGCCGGCAGCAATTTTGCGGGGCAAAACCTCCAAGGGG
TTGAATTTTCCCAGGTGAATCTTACCAACGCAGATTTAAGCGGCAGTGATCTCCGGGGGGCTGTTTTTAACAGTACGTTA
CTGGAAACGACCAACCTCCACGGGGCCGATTTTACCAATGGCATCGCCTATCTCTCTAAGTTTACTGGGGCCGATTTGAC
CGATGCGATTTTTGTGGAGGCGATTCTCCTGCGATCTACCTTTGAGAATGCCAAGATTGATGGCGCAGATTTCAGTTTTG
CCGTGTTAGACGGGCCACAACAGAAGAAGCTCTGTGCGGTGGCTACAGGGGTTAATCCAGTAACAGGGATTGCCACGGCT
GACTCTTTGGGCTGTTAA

Upstream 100 bases:

>100_bases
AGAGGTTTTCCAAAAACTCTATCGGATTTCCTCCCTTTCCGAGAATCTTTTAGAATATCCTTTGGAAAAATTTTGTTAAA
TGTCAGGCGAGTTGAGGGTT

Downstream 100 bases:

>100_bases
TCAAAGCCTGAACATTCGATTTTTATGGGGATGAACAGGGGGAAATGTTCCCCCTTTTTTGTGTTGTATCCCAGGTAACC
TTAAAGGGCTTCTAGGGGGT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVNLTNADLSGSDLRGAVFNSTL
LETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRSTFENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATA
DSLGC

Sequences:

>Translated_165_residues
MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVNLTNADLSGSDLRGAVFNSTL
LETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRSTFENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATA
DSLGC
>Mature_165_residues
MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVNLTNADLSGSDLRGAVFNSTL
LETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRSTFENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATA
DSLGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17072; Mature: 17072

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVN
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEE
LTNADLSGSDLRGAVFNSTLLETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRST
ECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATADSLGC
HCCCEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVN
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEE
LTNADLSGSDLRGAVFNSTLLETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRST
ECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATADSLGC
HCCCEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA