| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078800
Identifier: 170078800
GI number: 170078800
Start: 2292300
End: 2292797
Strand: Reverse
Name: 170078800
Synonym: SYNPCC7002_A2202
Alternate gene names: NA
Gene position: 2292797-2292300 (Counterclockwise)
Preceding gene: 170078803
Following gene: 170078798
Centisome position: 76.22
GC content: 51.61
Gene sequence:
>498_bases ATGAAGGTTTTAGCGCGCATTGTTGTTTTAGGTTTCGTCATTTTCGGGCTTTGTTGGGGGACACCGGCTTACGGGGCCAG TCCTGCGGCTACATCTCGGTCGGCGATCGACAGTGAAGATCTCGCCGGCAGCAATTTTGCGGGGCAAAACCTCCAAGGGG TTGAATTTTCCCAGGTGAATCTTACCAACGCAGATTTAAGCGGCAGTGATCTCCGGGGGGCTGTTTTTAACAGTACGTTA CTGGAAACGACCAACCTCCACGGGGCCGATTTTACCAATGGCATCGCCTATCTCTCTAAGTTTACTGGGGCCGATTTGAC CGATGCGATTTTTGTGGAGGCGATTCTCCTGCGATCTACCTTTGAGAATGCCAAGATTGATGGCGCAGATTTCAGTTTTG CCGTGTTAGACGGGCCACAACAGAAGAAGCTCTGTGCGGTGGCTACAGGGGTTAATCCAGTAACAGGGATTGCCACGGCT GACTCTTTGGGCTGTTAA
Upstream 100 bases:
>100_bases AGAGGTTTTCCAAAAACTCTATCGGATTTCCTCCCTTTCCGAGAATCTTTTAGAATATCCTTTGGAAAAATTTTGTTAAA TGTCAGGCGAGTTGAGGGTT
Downstream 100 bases:
>100_bases TCAAAGCCTGAACATTCGATTTTTATGGGGATGAACAGGGGGAAATGTTCCCCCTTTTTTGTGTTGTATCCCAGGTAACC TTAAAGGGCTTCTAGGGGGT
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVNLTNADLSGSDLRGAVFNSTL LETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRSTFENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATA DSLGC
Sequences:
>Translated_165_residues MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVNLTNADLSGSDLRGAVFNSTL LETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRSTFENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATA DSLGC >Mature_165_residues MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVNLTNADLSGSDLRGAVFNSTL LETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRSTFENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATA DSLGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17072; Mature: 17072
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVN CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEE LTNADLSGSDLRGAVFNSTLLETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRST ECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATADSLGC HCCCEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKVLARIVVLGFVIFGLCWGTPAYGASPAATSRSAIDSEDLAGSNFAGQNLQGVEFSQVN CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEE LTNADLSGSDLRGAVFNSTLLETTNLHGADFTNGIAYLSKFTGADLTDAIFVEAILLRST ECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FENAKIDGADFSFAVLDGPQQKKLCAVATGVNPVTGIATADSLGC HCCCEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA