| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is livK [C]
Identifier: 170078799
GI number: 170078799
Start: 2290915
End: 2292219
Strand: Direct
Name: livK [C]
Synonym: SYNPCC7002_A2201
Alternate gene names: 170078799
Gene position: 2290915-2292219 (Clockwise)
Preceding gene: 170078797
Following gene: 170078801
Centisome position: 76.16
GC content: 54.56
Gene sequence:
>1305_bases ATGCAAACATCGAAATTTAATTTGGCGATCGCCCTTTCCCTGGCGGCGATCGCAACCTTCACCGGAGCCTGCCAAGACAC CACTGCCCCCACTGATGGCAACGGCGAAACCCCTACAAATACTGGTGCTGAGGGCCTGAAGTTAGGCTCCCTGACGCCAA CCACTGGCGACCTTTCTTCCATTGGTCAAAATATGCCGATCGCCGTAGAACTGGCCGTAGAAACAATTAACGCTTGCGGG GGCGTCAATGAGCAACCCGTCACCCTCATCCAAGAAGATTCCCAAACAGACCCCACCGCCGGAGGGGCAGCGATGACAAA GCTGGCGGAAGTCGATAGAGTCGCCGGGGTTGTGGGGGCCTTTGCCAGTAGTGTGTCTAGTGCCGCTGTTGATGTTGCGG TGCGGAACCAAGTGATGCTCGTTTCCCCCGGCAGTACCAGTCCTGTGTTTACAGAACGGGCCGCGAATGGTGATTTTGAT GGCTATTGGGCCAGAACTGCGCCCCCCGACAGCTACCAAGCCCCTGCTTTGGCTGTTTTAGCGCAAAAACAAGGCTTTGA ACGGGTTTCTACCGTGGTGATTAACAACGACTATGGCGTGGGCTTTGAGCAAGAATTTATCAAAGCCTTTGAAAACCTTG GGGGCACCATTGTCAACAAAGATAATCCGGTGCGCTATGACCCGAAAGCCGCCACCCTCGATAGTGAAGCGGCAGCCGCT TTTGCCGGAGAACCCGATGCCGTCCTTGGGGTGCTCTACGCAGAGACTGGTAGTTTATTGCTCAAAGCCGCCTATGAACA AGGCTTAAGCGAAGGGATCACTGTTCTATTAACCGATGGCGTCTACAGCGAAGACTTTACCCAACAGGTAGGTACGACCG CCGCTGGTCAGTCAATTATTGCGGGGGCTCTAGGGACGGTTCCCGGTGCGGATGGCCCGGCCCTAGAAGCTTTTACAGCT CTCTGGCGCGAAAAAACAGGTAAGGAGGTTACGGCCTATGTGCCCCATTCCTGGGATGCGGCGATCGCCATGATGTTGGC CGCCGAAGCAGCGGATGTGAATACTGGCGAAGGCATTAAAAATTACCTCCGGGAAGTTACCAGTGGGGACGGCCAAGAAG TGAGTGATCCCTGTGAGGCGATCACCCTCGTCCGTGAAGGCCAAGCGATTAACTACCAAGGTGCCAGCGGGAACGTTGAC TTTGATGAAAATGGTGACGTGGCTGGAAACTACGACGTTTGGACCGTTAATGAAGATGCCAGTCTCTCGGTGATTGATAC CGTTAACCCCCTAGAAGCCCTTTAA
Upstream 100 bases:
>100_bases AACTATTGTAAATCGCCTTCTCCCCTTTCTTGGGGTTGCATCCTGGGGTTTGTGCATAAAATGAGGGAGATTTTAATCTT TTTTTGAAAAAATCTGAACC
Downstream 100 bases:
>100_bases GGTTACCTGGGATACAACACAAAAAAGGGGGAACATTTCCCCCTGTTCATCCCCATAAAAATCGAATGTTCAGGCTTTGA TTAACAGCCCAAAGAGTCAG
Product: ABC transporter amino acid-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MQTSKFNLAIALSLAAIATFTGACQDTTAPTDGNGETPTNTGAEGLKLGSLTPTTGDLSSIGQNMPIAVELAVETINACG GVNEQPVTLIQEDSQTDPTAGGAAMTKLAEVDRVAGVVGAFASSVSSAAVDVAVRNQVMLVSPGSTSPVFTERAANGDFD GYWARTAPPDSYQAPALAVLAQKQGFERVSTVVINNDYGVGFEQEFIKAFENLGGTIVNKDNPVRYDPKAATLDSEAAAA FAGEPDAVLGVLYAETGSLLLKAAYEQGLSEGITVLLTDGVYSEDFTQQVGTTAAGQSIIAGALGTVPGADGPALEAFTA LWREKTGKEVTAYVPHSWDAAIAMMLAAEAADVNTGEGIKNYLREVTSGDGQEVSDPCEAITLVREGQAINYQGASGNVD FDENGDVAGNYDVWTVNEDASLSVIDTVNPLEAL
Sequences:
>Translated_434_residues MQTSKFNLAIALSLAAIATFTGACQDTTAPTDGNGETPTNTGAEGLKLGSLTPTTGDLSSIGQNMPIAVELAVETINACG GVNEQPVTLIQEDSQTDPTAGGAAMTKLAEVDRVAGVVGAFASSVSSAAVDVAVRNQVMLVSPGSTSPVFTERAANGDFD GYWARTAPPDSYQAPALAVLAQKQGFERVSTVVINNDYGVGFEQEFIKAFENLGGTIVNKDNPVRYDPKAATLDSEAAAA FAGEPDAVLGVLYAETGSLLLKAAYEQGLSEGITVLLTDGVYSEDFTQQVGTTAAGQSIIAGALGTVPGADGPALEAFTA LWREKTGKEVTAYVPHSWDAAIAMMLAAEAADVNTGEGIKNYLREVTSGDGQEVSDPCEAITLVREGQAINYQGASGNVD FDENGDVAGNYDVWTVNEDASLSVIDTVNPLEAL >Mature_434_residues MQTSKFNLAIALSLAAIATFTGACQDTTAPTDGNGETPTNTGAEGLKLGSLTPTTGDLSSIGQNMPIAVELAVETINACG GVNEQPVTLIQEDSQTDPTAGGAAMTKLAEVDRVAGVVGAFASSVSSAAVDVAVRNQVMLVSPGSTSPVFTERAANGDFD GYWARTAPPDSYQAPALAVLAQKQGFERVSTVVINNDYGVGFEQEFIKAFENLGGTIVNKDNPVRYDPKAATLDSEAAAA FAGEPDAVLGVLYAETGSLLLKAAYEQGLSEGITVLLTDGVYSEDFTQQVGTTAAGQSIIAGALGTVPGADGPALEAFTA LWREKTGKEVTAYVPHSWDAAIAMMLAAEAADVNTGEGIKNYLREVTSGDGQEVSDPCEAITLVREGQAINYQGASGNVD FDENGDVAGNYDVWTVNEDASLSVIDTVNPLEAL
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Homo sapiens, GI187960069, Length=393, Percent_Identity=23.9185750636132, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI187960067, Length=393, Percent_Identity=23.9185750636132, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI4504141, Length=393, Percent_Identity=24.1730279898219, Blast_Score=72, Evalue=8e-13,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44769; Mature: 44769
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTSKFNLAIALSLAAIATFTGACQDTTAPTDGNGETPTNTGAEGLKLGSLTPTTGDLSS CCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHH IGQNMPIAVELAVETINACGGVNEQPVTLIQEDSQTDPTAGGAAMTKLAEVDRVAGVVGA HCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH FASSVSSAAVDVAVRNQVMLVSPGSTSPVFTERAANGDFDGYWARTAPPDSYQAPALAVL HHHHHHHHHEEEEECCEEEEECCCCCCCCEECCCCCCCCCCEECCCCCCCCCCCCHHHHH AQKQGFERVSTVVINNDYGVGFEQEFIKAFENLGGTIVNKDNPVRYDPKAATLDSEAAAA HHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCEECCCCCCCCCHHHHH FAGEPDAVLGVLYAETGSLLLKAAYEQGLSEGITVLLTDGVYSEDFTQQVGTTAAGQSII HCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHCCHHHH AGALGTVPGADGPALEAFTALWREKTGKEVTAYVPHSWDAAIAMMLAAEAADVNTGEGIK HHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHH NYLREVTSGDGQEVSDPCEAITLVREGQAINYQGASGNVDFDENGDVAGNYDVWTVNEDA HHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC SLSVIDTVNPLEAL CEEEEECCCHHHCC >Mature Secondary Structure MQTSKFNLAIALSLAAIATFTGACQDTTAPTDGNGETPTNTGAEGLKLGSLTPTTGDLSS CCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHH IGQNMPIAVELAVETINACGGVNEQPVTLIQEDSQTDPTAGGAAMTKLAEVDRVAGVVGA HCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH FASSVSSAAVDVAVRNQVMLVSPGSTSPVFTERAANGDFDGYWARTAPPDSYQAPALAVL HHHHHHHHHEEEEECCEEEEECCCCCCCCEECCCCCCCCCCEECCCCCCCCCCCCHHHHH AQKQGFERVSTVVINNDYGVGFEQEFIKAFENLGGTIVNKDNPVRYDPKAATLDSEAAAA HHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCEECCCCCCCCCHHHHH FAGEPDAVLGVLYAETGSLLLKAAYEQGLSEGITVLLTDGVYSEDFTQQVGTTAAGQSII HCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHCCHHHH AGALGTVPGADGPALEAFTALWREKTGKEVTAYVPHSWDAAIAMMLAAEAADVNTGEGIK HHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHH NYLREVTSGDGQEVSDPCEAITLVREGQAINYQGASGNVDFDENGDVAGNYDVWTVNEDA HHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC SLSVIDTVNPLEAL CEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA