| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078775
Identifier: 170078775
GI number: 170078775
Start: 2267251
End: 2267823
Strand: Reverse
Name: 170078775
Synonym: SYNPCC7002_A2177
Alternate gene names: NA
Gene position: 2267823-2267251 (Counterclockwise)
Preceding gene: 170078777
Following gene: 170078774
Centisome position: 75.39
GC content: 49.91
Gene sequence:
>573_bases ATGAAAAAATTTTCTTTTGCTTTAGCCGCTGCTAGTGCGCTCTCCCTCAGTCTCGCTTCCACTGCCCAAGCTGGTCAAGG TGGGATTGCCGCTGGTGCCGCTGCCACTTTCCTCCCCAATGGGAATGTCGAAAGCTTGTCTGTTGCTGCCGCTGTTGGTA AGGATTCCGCTGCTGTCGCCGTCCGTAGCCAGCTCGCTCCTATCATTGTCGACATCCCAACCATTGAAACAGTTACAATT GCGAACCCAAACTTTGTGAGTGGTACAACTCCTTCCACTATTGAAGTCGATCAGATCGTCTTAACCCCGACTGTAGTAGG AGATGGTGTAACAAATGAAGCCTATGCTCTTGGTGGAGGTAGCGACATCGAAGTTAACAGTATTGCCTCTTCTGAAGCGC TTAATGCAAACAACGTAGCACCGAACTCTGTCTTGTTTGGTGGCAACGACGACAACTTGAGTACTCCACAGGCTAACGCT CTTGCCGGTGGTGGTGGCAGCTTTGTCGTTTTCGATCCTGTTACTGGTACAGTTATCCTTGTAGATGGCAACGGTCTCTC CCCGCTAAATTAA
Upstream 100 bases:
>100_bases ATACTTACGTCTTCAGAACTAGCAGTGATTTTTTCCTATCAATTAGGTCACTGCTAGGCATGACAAAACAATCAACTCAA CTTAGAAATATCCTAAATCC
Downstream 100 bases:
>100_bases TCTCTGATAGTGATCCTAGATAAGTTAAGTCGATAGGAATTTGAAACTAATCAGATAAGGTGTATTGCTTAAGGGTAATG CACCTTTTTTTGTGCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKKFSFALAAASALSLSLASTAQAGQGGIAAGAAATFLPNGNVESLSVAAAVGKDSAAVAVRSQLAPIIVDIPTIETVTI ANPNFVSGTTPSTIEVDQIVLTPTVVGDGVTNEAYALGGGSDIEVNSIASSEALNANNVAPNSVLFGGNDDNLSTPQANA LAGGGGSFVVFDPVTGTVILVDGNGLSPLN
Sequences:
>Translated_190_residues MKKFSFALAAASALSLSLASTAQAGQGGIAAGAAATFLPNGNVESLSVAAAVGKDSAAVAVRSQLAPIIVDIPTIETVTI ANPNFVSGTTPSTIEVDQIVLTPTVVGDGVTNEAYALGGGSDIEVNSIASSEALNANNVAPNSVLFGGNDDNLSTPQANA LAGGGGSFVVFDPVTGTVILVDGNGLSPLN >Mature_190_residues MKKFSFALAAASALSLSLASTAQAGQGGIAAGAAATFLPNGNVESLSVAAAVGKDSAAVAVRSQLAPIIVDIPTIETVTI ANPNFVSGTTPSTIEVDQIVLTPTVVGDGVTNEAYALGGGSDIEVNSIASSEALNANNVAPNSVLFGGNDDNLSTPQANA LAGGGGSFVVFDPVTGTVILVDGNGLSPLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18555; Mature: 18555
Theoretical pI: Translated: 3.61; Mature: 3.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFSFALAAASALSLSLASTAQAGQGGIAAGAAATFLPNGNVESLSVAAAVGKDSAAVA CCCHHHHHHHHHHHEEEEHHCCCCCCCCEECCCEEEECCCCCCCEEEEEEECCCCCCEEE VRSQLAPIIVDIPTIETVTIANPNFVSGTTPSTIEVDQIVLTPTVVGDGVTNEAYALGGG ECCCCCEEEEECCCCEEEEECCCCEECCCCCCEEEEEEEEEEEEEECCCCCCCEEEECCC SDIEVNSIASSEALNANNVAPNSVLFGGNDDNLSTPQANALAGGGGSFVVFDPVTGTVIL CCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEE VDGNGLSPLN EECCCCCCCC >Mature Secondary Structure MKKFSFALAAASALSLSLASTAQAGQGGIAAGAAATFLPNGNVESLSVAAAVGKDSAAVA CCCHHHHHHHHHHHEEEEHHCCCCCCCCEECCCEEEECCCCCCCEEEEEEECCCCCCEEE VRSQLAPIIVDIPTIETVTIANPNFVSGTTPSTIEVDQIVLTPTVVGDGVTNEAYALGGG ECCCCCEEEEECCCCEEEEECCCCEECCCCCCEEEEEEEEEEEEEECCCCCCCEEEECCC SDIEVNSIASSEALNANNVAPNSVLFGGNDDNLSTPQANALAGGGGSFVVFDPVTGTVIL CCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEE VDGNGLSPLN EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA