| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078769
Identifier: 170078769
GI number: 170078769
Start: 2250293
End: 2252947
Strand: Direct
Name: 170078769
Synonym: SYNPCC7002_A2171
Alternate gene names: NA
Gene position: 2250293-2252947 (Clockwise)
Preceding gene: 170078768
Following gene: 170078770
Centisome position: 74.81
GC content: 47.61
Gene sequence:
>2655_bases TTGGTGATTGCGGGCCTCATGGCCGCCGGTCAATTCCAGCTCATCCCCCAGGCGATCGCAATTGGCACAGCAGCAGATAC AGACATCATTAACAAAGCCACCGCGACTTACAATGATCCTGCAAATCCAGGGGTTCCTCTAAACGCAGAATCTAATACTG TCACTGTTACCGTTGCAGAGGTCGCAGGTTTAACTAACGTTCCCGCAGGGATTGTTGATGAAAATGGCGGTAGTATCAAC TCCAATGACATTGTCAATTACGACTTTTTATTGACAAATACAGGAAACGCGACAAATAATATCGAGATTCCATTCGCTGC CATCACAAACCCCGATGGAAATCTAAGCGTTACTGGTTTTCTCGTTGACCTCAACAATGATGGGGATTTCGATGATACTG GTGAAAGTAATTCAGGAAATCCGTTTACAACTGACGTCACAGCTACAGGTATTGCAGCTGATGCTTCTGTTAAGGTTCGT GTTGTCACCACTGTAAATTCCGGCCTGGGAGCAAGTGAGCCTGTCGCGATCCAGCTTGGTAATACCCCGCCTAATGATAA TAGTGCTGGGACTCAAAACCAGTCTTATGATGCTGATGGTACAGTTGATGATGTTTTCACAACCGCAACTACACCAGTTA ATGGACAAAGAGAAGCTGCAGCCCTCCAAAGTAGCGCAACCTCTCAGTCTGTTACACCATTAGCATTAGCGACAGTTCTC AAAACCCGTGCTGCCTATAATCCAGCAACTCCAGCGACAACCGATGACACAATTACCTATCGTTTAGATTTTCGGGTTGA AAGTAGTTCTCCCAATTCTTCCTTTACCCCCACCAACCTAGAAGGTACAACCATTCAGCTTTCTACTGCGGCTAATGGTT CTAACCCTGTCGATGTACAGCGCATTCTCGTCTCTGATGCGATTCCTGAAAATACAGAACTGACAAATACCCCACCAACT GCTCCGGTAGGCTGGAAAGTTGTTTATAGTACGAGTGCGACCACAACTCGAACAGTTGGTGGGAGTACAGCTACTGCCCC CGCAGCTGCAGTCTGGCAAACAGTGGCTCCAGCTAGTTTGGCATCAGTCGAACGGATTGGTTGGATTTATGTTGGTCCGA GTAATGTTGCTGACAGTACAGTTTCTGGCCCAACTCTTGCAGCTGGTAGTGCCACCACTGGCGATGCGAATGGTTTCCGT TTCCAAGTTGTTACCAGTGGTCTAACAGCAGGTGGAACGATCGCCAACATTGCCCAAGCCTTCGGTGAAACGGTTGGTGA TCCGAACAACGAAGTTGTTTACGATGAATCTGGTGACCAAAACCCGAACAACTTTAACGACGATGACACACCTCCAGATC CCACCGGGACGAACTATGATCCTGTAAATGATACTGGTGTCGCAGATCCCGCTAACCAAGACACAGATAACAACAACAAC AACACAGGTACTGGCCCAGAAGGTGAAGCAAATGTCTTAGCGATTACACCTCCAGGGGCAATCCTAAACGGCCCGCTAAA TCAACCTGGCGCTGTTGGCCCGACAAACAACAACGATGACTTTGTCAATAAGTCTAGTCTTGCTCTTGAAGGCGGCGGCA CCCAAACAGCAACTCCAGGACAAACCTTCAATCCGGCACCAGTTGTTTTTAACAATACCTTCCAGAACCCATCAAGCAAC GCTGGAGAACTAGACACAGTTCGTCTACTTCCCCTTGCCCCGAATAATACTGCCGTTCCAGCCACAACTCCCGTGCAAGA AGCGACAGATATTCCTGATGGCACTCGTGTAACGATTACAGTGGGTTCCAGTAGTGCTGCTTATGATTATGACAATGCCA CTGGTTACACATATGTCGCCAGCTCTGGGACTGGGCCAAACTTTGATGGGACAGCAAACACCCTAAAATTTGACAATATC AGTCCTGGAGTTTCCATCAACTACACAGTCACCATTGATCTACCGGCAGGTTCCCAATTATCTGCGGATCGCTTTAGTGC AAACGGTGTAAGTCGTGCCGGTTATTCTGTCCCAGTTGTTGCTTTTGTTGATAACAATAATTCTGGCGCATTTGAGTTCT CAACAACGCCTTCGTCAAATAATGACAACGTTTTCAACATCAAGATCGACCGCTTGTACCTTGGTCACCTCGCTCTCTTA AAAGAGCAACGGGTATTAAATCCGAATGAAACGGTTGATACTGATTGGACAACTAACCCAATTGCTGATGTTGAACCCGG GCAGTTCATCGAGTACCGCATTTCCTATGTGAACTTCTCAACACCCTCTACTACAGGTTCGTCTGGGAACGTCACCCTCG GCATCAGTAATTTAGTGATTACTGAGGATGGCACAACTGGAACCTTCGTTCCTGGTGGTACTGCTATAGCGCCGCCTGGT AATGGAACGGCGAATAACTGGGCCTTACCACTATCGACTCCCTCAACGACTCACCAACAGAATACTTCTGCAACTCTAGG AACACTACAGTATTTCAATGGTGTGACTAATCTGGGCAATTTAGACCCAGCAGATGGAGCGACGGTAACACGCTACGTCA ATAGTGTTGGCACTTTGACACCTGACACAGCAGTGACACCGGGTACTGCTTCGACTTACCAAGGCAGCTTCATTTTCCGT CGTGTTTTGAACTAA
Upstream 100 bases:
>100_bases GAATTTTTATTTGAGGAATTTTTAAGTGAACAATCAAGTTTGGCGATCGCCAAAGTGCAAAACCCCCAGAAAAAATACGA TCCGTAAGCTCGCTAGTCCC
Downstream 100 bases:
>100_bases CTCTTTATGCCCTCAAGTTTCCATGCTTCGATTACTACCGTCGAGGCATGGACAGGGGGCTGCTGTAAAAATTTCATGTT GCTAGTAGACAAAGGTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 884; Mature: 884
Protein sequence:
>884_residues MVIAGLMAAGQFQLIPQAIAIGTAADTDIINKATATYNDPANPGVPLNAESNTVTVTVAEVAGLTNVPAGIVDENGGSIN SNDIVNYDFLLTNTGNATNNIEIPFAAITNPDGNLSVTGFLVDLNNDGDFDDTGESNSGNPFTTDVTATGIAADASVKVR VVTTVNSGLGASEPVAIQLGNTPPNDNSAGTQNQSYDADGTVDDVFTTATTPVNGQREAAALQSSATSQSVTPLALATVL KTRAAYNPATPATTDDTITYRLDFRVESSSPNSSFTPTNLEGTTIQLSTAANGSNPVDVQRILVSDAIPENTELTNTPPT APVGWKVVYSTSATTTRTVGGSTATAPAAAVWQTVAPASLASVERIGWIYVGPSNVADSTVSGPTLAAGSATTGDANGFR FQVVTSGLTAGGTIANIAQAFGETVGDPNNEVVYDESGDQNPNNFNDDDTPPDPTGTNYDPVNDTGVADPANQDTDNNNN NTGTGPEGEANVLAITPPGAILNGPLNQPGAVGPTNNNDDFVNKSSLALEGGGTQTATPGQTFNPAPVVFNNTFQNPSSN AGELDTVRLLPLAPNNTAVPATTPVQEATDIPDGTRVTITVGSSSAAYDYDNATGYTYVASSGTGPNFDGTANTLKFDNI SPGVSINYTVTIDLPAGSQLSADRFSANGVSRAGYSVPVVAFVDNNNSGAFEFSTTPSSNNDNVFNIKIDRLYLGHLALL KEQRVLNPNETVDTDWTTNPIADVEPGQFIEYRISYVNFSTPSTTGSSGNVTLGISNLVITEDGTTGTFVPGGTAIAPPG NGTANNWALPLSTPSTTHQQNTSATLGTLQYFNGVTNLGNLDPADGATVTRYVNSVGTLTPDTAVTPGTASTYQGSFIFR RVLN
Sequences:
>Translated_884_residues MVIAGLMAAGQFQLIPQAIAIGTAADTDIINKATATYNDPANPGVPLNAESNTVTVTVAEVAGLTNVPAGIVDENGGSIN SNDIVNYDFLLTNTGNATNNIEIPFAAITNPDGNLSVTGFLVDLNNDGDFDDTGESNSGNPFTTDVTATGIAADASVKVR VVTTVNSGLGASEPVAIQLGNTPPNDNSAGTQNQSYDADGTVDDVFTTATTPVNGQREAAALQSSATSQSVTPLALATVL KTRAAYNPATPATTDDTITYRLDFRVESSSPNSSFTPTNLEGTTIQLSTAANGSNPVDVQRILVSDAIPENTELTNTPPT APVGWKVVYSTSATTTRTVGGSTATAPAAAVWQTVAPASLASVERIGWIYVGPSNVADSTVSGPTLAAGSATTGDANGFR FQVVTSGLTAGGTIANIAQAFGETVGDPNNEVVYDESGDQNPNNFNDDDTPPDPTGTNYDPVNDTGVADPANQDTDNNNN NTGTGPEGEANVLAITPPGAILNGPLNQPGAVGPTNNNDDFVNKSSLALEGGGTQTATPGQTFNPAPVVFNNTFQNPSSN AGELDTVRLLPLAPNNTAVPATTPVQEATDIPDGTRVTITVGSSSAAYDYDNATGYTYVASSGTGPNFDGTANTLKFDNI SPGVSINYTVTIDLPAGSQLSADRFSANGVSRAGYSVPVVAFVDNNNSGAFEFSTTPSSNNDNVFNIKIDRLYLGHLALL KEQRVLNPNETVDTDWTTNPIADVEPGQFIEYRISYVNFSTPSTTGSSGNVTLGISNLVITEDGTTGTFVPGGTAIAPPG NGTANNWALPLSTPSTTHQQNTSATLGTLQYFNGVTNLGNLDPADGATVTRYVNSVGTLTPDTAVTPGTASTYQGSFIFR RVLN >Mature_884_residues MVIAGLMAAGQFQLIPQAIAIGTAADTDIINKATATYNDPANPGVPLNAESNTVTVTVAEVAGLTNVPAGIVDENGGSIN SNDIVNYDFLLTNTGNATNNIEIPFAAITNPDGNLSVTGFLVDLNNDGDFDDTGESNSGNPFTTDVTATGIAADASVKVR VVTTVNSGLGASEPVAIQLGNTPPNDNSAGTQNQSYDADGTVDDVFTTATTPVNGQREAAALQSSATSQSVTPLALATVL KTRAAYNPATPATTDDTITYRLDFRVESSSPNSSFTPTNLEGTTIQLSTAANGSNPVDVQRILVSDAIPENTELTNTPPT APVGWKVVYSTSATTTRTVGGSTATAPAAAVWQTVAPASLASVERIGWIYVGPSNVADSTVSGPTLAAGSATTGDANGFR FQVVTSGLTAGGTIANIAQAFGETVGDPNNEVVYDESGDQNPNNFNDDDTPPDPTGTNYDPVNDTGVADPANQDTDNNNN NTGTGPEGEANVLAITPPGAILNGPLNQPGAVGPTNNNDDFVNKSSLALEGGGTQTATPGQTFNPAPVVFNNTFQNPSSN AGELDTVRLLPLAPNNTAVPATTPVQEATDIPDGTRVTITVGSSSAAYDYDNATGYTYVASSGTGPNFDGTANTLKFDNI SPGVSINYTVTIDLPAGSQLSADRFSANGVSRAGYSVPVVAFVDNNNSGAFEFSTTPSSNNDNVFNIKIDRLYLGHLALL KEQRVLNPNETVDTDWTTNPIADVEPGQFIEYRISYVNFSTPSTTGSSGNVTLGISNLVITEDGTTGTFVPGGTAIAPPG NGTANNWALPLSTPSTTHQQNTSATLGTLQYFNGVTNLGNLDPADGATVTRYVNSVGTLTPDTAVTPGTASTYQGSFIFR RVLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90755; Mature: 90755
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIAGLMAAGQFQLIPQAIAIGTAADTDIINKATATYNDPANPGVPLNAESNTVTVTVAE CEEEEEECCCCEEECCHHEEECCCCCCHHHHCCCCCCCCCCCCCEECCCCCCEEEEEEHH VAGLTNVPAGIVDENGGSINSNDIVNYDFLLTNTGNATNNIEIPFAAITNPDGNLSVTGF HCCCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEE LVDLNNDGDFDDTGESNSGNPFTTDVTATGIAADASVKVRVVTTVNSGLGASEPVAIQLG EEECCCCCCCCCCCCCCCCCCEEEEEEECCEEECCEEEEEEEEEECCCCCCCCCEEEEEC NTPPNDNSAGTQNQSYDADGTVDDVFTTATTPVNGQREAAALQSSATSQSVTPLALATVL CCCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH KTRAAYNPATPATTDDTITYRLDFRVESSSPNSSFTPTNLEGTTIQLSTAANGSNPVDVQ HHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH RILVSDAIPENTELTNTPPTAPVGWKVVYSTSATTTRTVGGSTATAPAAAVWQTVAPASL HEEHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCHHH ASVERIGWIYVGPSNVADSTVSGPTLAAGSATTGDANGFRFQVVTSGLTAGGTIANIAQA HHHHHCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH FGETVGDPNNEVVYDESGDQNPNNFNDDDTPPDPTGTNYDPVNDTGVADPANQDTDNNNN HHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NTGTGPEGEANVLAITPPGAILNGPLNQPGAVGPTNNNDDFVNKSSLALEGGGTQTATPG CCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC QTFNPAPVVFNNTFQNPSSNAGELDTVRLLPLAPNNTAVPATTPVQEATDIPDGTRVTIT CCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCEEEEE VGSSSAAYDYDNATGYTYVASSGTGPNFDGTANTLKFDNISPGVSINYTVTIDLPAGSQL ECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCC SADRFSANGVSRAGYSVPVVAFVDNNNSGAFEFSTTPSSNNDNVFNIKIDRLYLGHLALL CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEEEEEEECHHHHH KEQRVLNPNETVDTDWTTNPIADVEPGQFIEYRISYVNFSTPSTTGSSGNVTLGISNLVI HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEE TEDGTTGTFVPGGTAIAPPGNGTANNWALPLSTPSTTHQQNTSATLGTLQYFNGVTNLGN ECCCCCCEECCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC LDPADGATVTRYVNSVGTLTPDTAVTPGTASTYQGSFIFRRVLN CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MVIAGLMAAGQFQLIPQAIAIGTAADTDIINKATATYNDPANPGVPLNAESNTVTVTVAE CEEEEEECCCCEEECCHHEEECCCCCCHHHHCCCCCCCCCCCCCEECCCCCCEEEEEEHH VAGLTNVPAGIVDENGGSINSNDIVNYDFLLTNTGNATNNIEIPFAAITNPDGNLSVTGF HCCCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEE LVDLNNDGDFDDTGESNSGNPFTTDVTATGIAADASVKVRVVTTVNSGLGASEPVAIQLG EEECCCCCCCCCCCCCCCCCCEEEEEEECCEEECCEEEEEEEEEECCCCCCCCCEEEEEC NTPPNDNSAGTQNQSYDADGTVDDVFTTATTPVNGQREAAALQSSATSQSVTPLALATVL CCCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH KTRAAYNPATPATTDDTITYRLDFRVESSSPNSSFTPTNLEGTTIQLSTAANGSNPVDVQ HHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH RILVSDAIPENTELTNTPPTAPVGWKVVYSTSATTTRTVGGSTATAPAAAVWQTVAPASL HEEHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCHHH ASVERIGWIYVGPSNVADSTVSGPTLAAGSATTGDANGFRFQVVTSGLTAGGTIANIAQA HHHHHCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH FGETVGDPNNEVVYDESGDQNPNNFNDDDTPPDPTGTNYDPVNDTGVADPANQDTDNNNN HHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NTGTGPEGEANVLAITPPGAILNGPLNQPGAVGPTNNNDDFVNKSSLALEGGGTQTATPG CCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC QTFNPAPVVFNNTFQNPSSNAGELDTVRLLPLAPNNTAVPATTPVQEATDIPDGTRVTIT CCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCEEEEE VGSSSAAYDYDNATGYTYVASSGTGPNFDGTANTLKFDNISPGVSINYTVTIDLPAGSQL ECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCC SADRFSANGVSRAGYSVPVVAFVDNNNSGAFEFSTTPSSNNDNVFNIKIDRLYLGHLALL CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEEEEEEECHHHHH KEQRVLNPNETVDTDWTTNPIADVEPGQFIEYRISYVNFSTPSTTGSSGNVTLGISNLVI HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEE TEDGTTGTFVPGGTAIAPPGNGTANNWALPLSTPSTTHQQNTSATLGTLQYFNGVTNLGN ECCCCCCEECCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC LDPADGATVTRYVNSVGTLTPDTAVTPGTASTYQGSFIFRRVLN CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA