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The map label for this gene is 170078757

Identifier: 170078757

GI number: 170078757

Start: 2238801

End: 2239667

Strand: Direct

Name: 170078757

Synonym: SYNPCC7002_A2159

Alternate gene names: NA

Gene position: 2238801-2239667 (Clockwise)

Preceding gene: 170078756

Following gene: 170078758

Centisome position: 74.43

GC content: 54.9

Gene sequence:

>867_bases
ATGGAACTAGGTAACTATGCGCAGCCCCGAACGAAAATTCCCATGAACAGCAGCACCCCTTGGATCCTTTTGGGAACAGT
CCTTCTCCTCGGCTCCGGCACCCCCGGACTGTCCCAGACCGCCCCTGAAACAAGCAATAACGCCGCCAACGCGATCCAAC
GGTATAACGCGGGGGTCGATGCCCTCACCCAAGGGAATTTTGAAGGGGCGATCGCCGAATTTTCAGCGGCCATTAACCTC
GACGAATCCGACCCCGACGCCTACTACAATCGCGGCTACAGCTACCATGTCCTGGGGGAATACCAGGCCGCCTACGATGA
CTATAGCCAGGCGATCCAGCTCAAACCCGAATTTGCCGACGCCTACGGGAACCGCTGTTACGCTGCCTATTTGCTCGACA
ACTATGAACAGGCGATCGCCGATTGTGACCAAGCGATTATCCTCAAAAATAACAATCCAGATTTTTTCATTAACCGGGGC
AACGCCTACGACGATCTCGCGCTCCAGGCCCGCAACGCCAACCAAACCGAACTCGCCAACGGTTACCATGCCAAGGCGAT
CGCCGACTACAATGCAGCCCTGACCCTCCGGCCCAACTATTTCAAGGCCTACTATAATCGCGCCCTGGCCCACAACCGTT
TTGAAAATCACACCGCCGCCCTCCAGGACTACACCGCTAGCATTACTGGCAATCCTGAATTCGCCGAAGCCTACTACAAC
CGCGCCATTACCCACTACAAACTCGATAATCTCGAACAGGCGATCGCCGATATGACCCAAGCTGTCTCCCTTTTTGAGCA
GCAAAACCAAGCCACAAACCAAACCCAAGCCCTCAAAATTCTCGAAAGCCTCCAAGGTCAGCTCTGA

Upstream 100 bases:

>100_bases
CAAATGTGTGGGAATGCGGTAAGTTAGGCGATCGCCACCAATCATCAAACTAATGCAAAGTCTTAAGGACGGGAACTTAA
CGCTGTCATAGCCCTCTAAG

Downstream 100 bases:

>100_bases
AATTCCCCAATCGCTCCGATAAAATAAAGGGCAAATATTGTTAACAATCGTGGCGCAACCTAATATATATAGATTGTCGG
GCCACACCAAGGAGAATCAA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MELGNYAQPRTKIPMNSSTPWILLGTVLLLGSGTPGLSQTAPETSNNAANAIQRYNAGVDALTQGNFEGAIAEFSAAINL
DESDPDAYYNRGYSYHVLGEYQAAYDDYSQAIQLKPEFADAYGNRCYAAYLLDNYEQAIADCDQAIILKNNNPDFFINRG
NAYDDLALQARNANQTELANGYHAKAIADYNAALTLRPNYFKAYYNRALAHNRFENHTAALQDYTASITGNPEFAEAYYN
RAITHYKLDNLEQAIADMTQAVSLFEQQNQATNQTQALKILESLQGQL

Sequences:

>Translated_288_residues
MELGNYAQPRTKIPMNSSTPWILLGTVLLLGSGTPGLSQTAPETSNNAANAIQRYNAGVDALTQGNFEGAIAEFSAAINL
DESDPDAYYNRGYSYHVLGEYQAAYDDYSQAIQLKPEFADAYGNRCYAAYLLDNYEQAIADCDQAIILKNNNPDFFINRG
NAYDDLALQARNANQTELANGYHAKAIADYNAALTLRPNYFKAYYNRALAHNRFENHTAALQDYTASITGNPEFAEAYYN
RAITHYKLDNLEQAIADMTQAVSLFEQQNQATNQTQALKILESLQGQL
>Mature_288_residues
MELGNYAQPRTKIPMNSSTPWILLGTVLLLGSGTPGLSQTAPETSNNAANAIQRYNAGVDALTQGNFEGAIAEFSAAINL
DESDPDAYYNRGYSYHVLGEYQAAYDDYSQAIQLKPEFADAYGNRCYAAYLLDNYEQAIADCDQAIILKNNNPDFFINRG
NAYDDLALQARNANQTELANGYHAKAIADYNAALTLRPNYFKAYYNRALAHNRFENHTAALQDYTASITGNPEFAEAYYN
RAITHYKLDNLEQAIADMTQAVSLFEQQNQATNQTQALKILESLQGQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=203, Percent_Identity=29.5566502463054, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI32307148, Length=203, Percent_Identity=29.5566502463054, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17647755, Length=219, Percent_Identity=27.8538812785388, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24585827, Length=219, Percent_Identity=27.8538812785388, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24585829, Length=219, Percent_Identity=27.8538812785388, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 31941; Mature: 31941

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELGNYAQPRTKIPMNSSTPWILLGTVLLLGSGTPGLSQTAPETSNNAANAIQRYNAGVD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
ALTQGNFEGAIAEFSAAINLDESDPDAYYNRGYSYHVLGEYQAAYDDYSQAIQLKPEFAD
HHCCCCCCHHHHHHHHEEECCCCCCCHHHHCCCEEEEECCHHHHHHHHHHHEECCCHHHH
AYGNRCYAAYLLDNYEQAIADCDQAIILKNNNPDFFINRGNAYDDLALQARNANQTELAN
HCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCEEEECCCCHHHHCC
GYHAKAIADYNAALTLRPNYFKAYYNRALAHNRFENHTAALQDYTASITGNPEFAEAYYN
CCCCEEEECCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCHHHHHHHHH
RAITHYKLDNLEQAIADMTQAVSLFEQQNQATNQTQALKILESLQGQL
HHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELGNYAQPRTKIPMNSSTPWILLGTVLLLGSGTPGLSQTAPETSNNAANAIQRYNAGVD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
ALTQGNFEGAIAEFSAAINLDESDPDAYYNRGYSYHVLGEYQAAYDDYSQAIQLKPEFAD
HHCCCCCCHHHHHHHHEEECCCCCCCHHHHCCCEEEEECCHHHHHHHHHHHEECCCHHHH
AYGNRCYAAYLLDNYEQAIADCDQAIILKNNNPDFFINRGNAYDDLALQARNANQTELAN
HCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCEEEECCCCHHHHCC
GYHAKAIADYNAALTLRPNYFKAYYNRALAHNRFENHTAALQDYTASITGNPEFAEAYYN
CCCCEEEECCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCHHHHHHHHH
RAITHYKLDNLEQAIADMTQAVSLFEQQNQATNQTQALKILESLQGQL
HHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]