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The map label for this gene is dppB [H]

Identifier: 170078746

GI number: 170078746

Start: 2230261

End: 2231295

Strand: Direct

Name: dppB [H]

Synonym: SYNPCC7002_A2148

Alternate gene names: 170078746

Gene position: 2230261-2231295 (Clockwise)

Preceding gene: 170078744

Following gene: 170078748

Centisome position: 74.14

GC content: 52.85

Gene sequence:

>1035_bases
TTGCCCATGGCTTCCCGCAGTAAAGCTCTCCAGTACTACATCTTGGTGCGTCTGCTCCTGGCTCCCTTGATGTTGTTAAC
CATTATCACTGTCGTTTTTCTACTACTCCGGGCCACCCCAGGCGATCCCGCTGATGCAATCCTCGGCAACCGTGCCCCTG
AAGCGACCAAGGCCCTACTCCGGGAACAACTAGGCTTAGATCTGCCCCTCTGGTTGCAGTATGTCCGTTACCTCGGCAGC
CTATTGCAATTTGACTTAGGAACATCCCTCACCAGTCGCGGCTTACCGGTGTGGGAGGTGATTCAGCAGCATTTTCCCGC
AACCGTAGAATTAACCTTGTTTGGCATGATTGTTGCGGTGGTGGTGGGAGCTGGCGTGGGGATGCTCGCGGCCTCCCGCC
AAGGCACTTGGTTTGATGTGGGCGGGCGATTATTCGGGATTATCACCTACGCACTGCCTTTGTTCTGGATGGGAATGGTG
GTACAACTCATTTTTTCGGTGCAGTTGGGGTGGTTTCCCCTGGGGACACGCTTTCCGTTGGATGTGCCCCCACCGCCCAC
CTTGTCGGGCCTCTATACCCTCGATAGTCTGCTCACGGGAAGTTTTTTGCAACTCAGAACGGCTTTGTATTATTTGGTGT
TGCCCTGCTGTACGTTGGGAATTCTCTTGAGTGGTATTTTTGAGCGCATTGTGCGGGTTAATCTGCGCCAAACGTTGCAG
TCGGATTATGTCGAAGCGGCGCGGGCCAGGGGTATTCCTGAACGAAAAATTCTCTGGAACCATGCCCTGAAAAATGCGCT
CATTCCGGTAATCACGGTCTTGGGTTTAACCTTCGCGGCTTTGTTGGGAGGAGCGGTTTTAACGGAAGTGACATTTTCCT
GGCCAGGTTTGGGGAATCGTCTTTATGAGGCAATTTCCCTGCGGGATTATCCAACGGTACAGGGGATTATGGTGTTTTTC
GGGGCGATTGTGGTGGTGGTCAGTCTGGTGATTGATATTGTGAATGCGTTGATCGACCCACGGATTCGTTACTAA

Upstream 100 bases:

>100_bases
GTCTGTCATAACGTTAATTCCCCTCACTAGCCCAGAATAATTTTTCTGGGGAACGACCGCAGTTTCCTATAATTTTTCCA
GTTCTATCTCTCCCCACCCA

Downstream 100 bases:

>100_bases
CTAGCCCCAGAGGAAGCGCAATGACCAAAAGGGCAGCAGCAACACAAGGATCAGCCAATCCCAACGGTGGAAGCGCAGTT
GATGCCAACGGACAAGGTGC

Product: binding-protein-dependent transport systems inner membrane protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MPMASRSKALQYYILVRLLLAPLMLLTIITVVFLLLRATPGDPADAILGNRAPEATKALLREQLGLDLPLWLQYVRYLGS
LLQFDLGTSLTSRGLPVWEVIQQHFPATVELTLFGMIVAVVVGAGVGMLAASRQGTWFDVGGRLFGIITYALPLFWMGMV
VQLIFSVQLGWFPLGTRFPLDVPPPPTLSGLYTLDSLLTGSFLQLRTALYYLVLPCCTLGILLSGIFERIVRVNLRQTLQ
SDYVEAARARGIPERKILWNHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNRLYEAISLRDYPTVQGIMVFF
GAIVVVVSLVIDIVNALIDPRIRY

Sequences:

>Translated_344_residues
MPMASRSKALQYYILVRLLLAPLMLLTIITVVFLLLRATPGDPADAILGNRAPEATKALLREQLGLDLPLWLQYVRYLGS
LLQFDLGTSLTSRGLPVWEVIQQHFPATVELTLFGMIVAVVVGAGVGMLAASRQGTWFDVGGRLFGIITYALPLFWMGMV
VQLIFSVQLGWFPLGTRFPLDVPPPPTLSGLYTLDSLLTGSFLQLRTALYYLVLPCCTLGILLSGIFERIVRVNLRQTLQ
SDYVEAARARGIPERKILWNHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNRLYEAISLRDYPTVQGIMVFF
GAIVVVVSLVIDIVNALIDPRIRY
>Mature_343_residues
PMASRSKALQYYILVRLLLAPLMLLTIITVVFLLLRATPGDPADAILGNRAPEATKALLREQLGLDLPLWLQYVRYLGSL
LQFDLGTSLTSRGLPVWEVIQQHFPATVELTLFGMIVAVVVGAGVGMLAASRQGTWFDVGGRLFGIITYALPLFWMGMVV
QLIFSVQLGWFPLGTRFPLDVPPPPTLSGLYTLDSLLTGSFLQLRTALYYLVLPCCTLGILLSGIFERIVRVNLRQTLQS
DYVEAARARGIPERKILWNHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNRLYEAISLRDYPTVQGIMVFFG
AIVVVVSLVIDIVNALIDPRIRY

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=37.5739644970414, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1787053, Length=332, Percent_Identity=34.3373493975904, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1787761, Length=320, Percent_Identity=40, Blast_Score=197, Evalue=9e-52,
Organism=Escherichia coli, GI1787550, Length=274, Percent_Identity=33.5766423357664, Blast_Score=160, Evalue=9e-41,
Organism=Escherichia coli, GI1789888, Length=334, Percent_Identity=29.940119760479, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1787497, Length=333, Percent_Identity=28.5285285285285, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788504, Length=371, Percent_Identity=28.3018867924528, Blast_Score=124, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37883; Mature: 37752

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMASRSKALQYYILVRLLLAPLMLLTIITVVFLLLRATPGDPADAILGNRAPEATKALL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHH
REQLGLDLPLWLQYVRYLGSLLQFDLGTSLTSRGLPVWEVIQQHFPATVELTLFGMIVAV
HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
VVGAGVGMLAASRQGTWFDVGGRLFGIITYALPLFWMGMVVQLIFSVQLGWFPLGTRFPL
HHHCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
DVPPPPTLSGLYTLDSLLTGSFLQLRTALYYLVLPCCTLGILLSGIFERIVRVNLRQTLQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDYVEAARARGIPERKILWNHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LYEAISLRDYPTVQGIMVFFGAIVVVVSLVIDIVNALIDPRIRY
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PMASRSKALQYYILVRLLLAPLMLLTIITVVFLLLRATPGDPADAILGNRAPEATKALL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHH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HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]