| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078732
Identifier: 170078732
GI number: 170078732
Start: 2217789
End: 2218172
Strand: Direct
Name: 170078732
Synonym: SYNPCC7002_A2133
Alternate gene names: NA
Gene position: 2217789-2218172 (Clockwise)
Preceding gene: 170078731
Following gene: 170078733
Centisome position: 73.73
GC content: 33.59
Gene sequence:
>384_bases ATGACCATCAAAGAATTATTAAAAGACCAAGAAAGACTCTATTTCTACTATCAATCAGCGTTGAAAAAGTCACAAAAAAA ATTTGAGATTAACAAAAATCATCAGAAAAATAGTCTTTATTTAGCCAAGCAAGCAGCAATAATTTTAAAAGAAAAATTCA ATGCCTCTAAAGTTGCTTTGTTCGGTTCAATTCTTGATTTAGAAACATTTACCCAGTGGTCAGATATTGACATTGCTGCA TGGGGACTAGAGCCAAGTGAAACGTTGTTAGCTATGGACACAGTACAAAGCCTTAGTGATGAGATTGAAATCAATCTGGT CGATATCAACACAGTCAAATCAGAAGTTTACCAAAGCATTCTAAAGAACCACCAGGAAATATGA
Upstream 100 bases:
>100_bases ACGAATATGAGAAACTGATAACACCACTCCTACAAAGTACAAAACAGAAAAAAGCCCGCAAAAACAAAACATCTTAATTT CACATTGAATAATGAGAACA
Downstream 100 bases:
>100_bases TTTCTTCTTATTTGAAAGTCGCAGGACATATTAATGATGAACTTGTTAGCTTAGAAAAAACCTACCAGAGAATTCATCGT GCCAATCAAGCTCGACAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTIKELLKDQERLYFYYQSALKKSQKKFEINKNHQKNSLYLAKQAAIILKEKFNASKVALFGSILDLETFTQWSDIDIAA WGLEPSETLLAMDTVQSLSDEIEINLVDINTVKSEVYQSILKNHQEI
Sequences:
>Translated_127_residues MTIKELLKDQERLYFYYQSALKKSQKKFEINKNHQKNSLYLAKQAAIILKEKFNASKVALFGSILDLETFTQWSDIDIAA WGLEPSETLLAMDTVQSLSDEIEINLVDINTVKSEVYQSILKNHQEI >Mature_126_residues TIKELLKDQERLYFYYQSALKKSQKKFEINKNHQKNSLYLAKQAAIILKEKFNASKVALFGSILDLETFTQWSDIDIAAW GLEPSETLLAMDTVQSLSDEIEINLVDINTVKSEVYQSILKNHQEI
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14687; Mature: 14556
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKELLKDQERLYFYYQSALKKSQKKFEINKNHQKNSLYLAKQAAIILKEKFNASKVAL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHH FGSILDLETFTQWSDIDIAAWGLEPSETLLAMDTVQSLSDEIEINLVDINTVKSEVYQSI HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHH LKNHQEI HHHCCCC >Mature Secondary Structure TIKELLKDQERLYFYYQSALKKSQKKFEINKNHQKNSLYLAKQAAIILKEKFNASKVAL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHH FGSILDLETFTQWSDIDIAAWGLEPSETLLAMDTVQSLSDEIEINLVDINTVKSEVYQSI HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHH LKNHQEI HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA