| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is argC
Identifier: 170078703
GI number: 170078703
Start: 2178384
End: 2179442
Strand: Direct
Name: argC
Synonym: SYNPCC7002_A2102
Alternate gene names: 170078703
Gene position: 2178384-2179442 (Clockwise)
Preceding gene: 170078702
Following gene: 170078705
Centisome position: 72.42
GC content: 53.64
Gene sequence:
>1059_bases ATGAGCAGTTCGGAAAAGGTTTCGGTCGGGATTGTCGGCGCGTCGGGCTATGGTGGTATGCAACTCGTCCGTCTGCTGAG TGATCATCCCCAAGTGGAGCTGACCTATCTAGGGGGCAACAGCAGTGCCGGAAAACCCTACGCAGAACTTTATCCCCATG TCGGCCACCGCATCAAAATGATCGTTGAGCCCATTGATCTCGATGTGATTGCCAGCCGTTGCCAGGTGGTTTTTCTCGGT TTGCCCAATGGCTTGGCCTGTGACCTTGCCCCCCAACTGATCGAACGGGGCTGCAAAGTCCTTGACCTTTCGGCTGACTA TCGCTTCAAGGATCTCGACACCTATCAGGCTTGGTATAAAACAGAACGCACCGACCAAGATACGAATGCGATCGCCGTTT ATGGTCTGCCAGAACTCTACCGGGATGACATTCGCCGCGCCCAACTGGTGGGTTGCCCTGGTTGTTATGTCACTGCTAGC CTCTTGGCCCTGGCACCCCTCTTCAAACAGGGCTTGATTCAGCCAGAAACCGCAATTATTGATGCCAAATCCGGCACATC CGGCGGAGGTCGCCAAGGGAAAATAAATTTACTCTTAGCCGAAGCCGATGCTTCCCTGGGAGCCTATGGAGTAGCCTCCC ACCGCCATACCCCAGAAATTGAACAAATTTGTAGCAAACTCGCCAGCCAAGATATTCGCGTGCAATTTACGCCCCACCTC ATCCCGATGCCCAGGGGCATTCTGGCGACGGTCTACGCAACCCTCCGGGATCCGGGTTTGGTGCGCGATGATTTACTGAC CATTTACAGCGCCTTTTATCGAGCAGCTCCCTGTGTAGAAGTTCTACCCAACGGTGTTTATCCCCAGACGAAGTGGGCCT GTGGTACAAACCTCTGCTATTTGGGAATTGAAGTAGATCACCGCACGGGCCGCGTCATTGTGATGTCCGCCATTGATAAT CTCCTGAAGGGTCAGTCGGGCCAAGCCGTCCAATGTATGAATATTATGCTGGGCTGGGAGGAAACGGCAGGCTTACCGCA GTTAGCGTTTTATCCTTAA
Upstream 100 bases:
>100_bases ATGGCGCAAAATAAAATCGGTTGTCCTTAGCGTTTCCCTGTACAATTGCAGCCAACAAGGGCGATCGCCCCCAGGCAATG TTCAGGTAATAGCAGGATTT
Downstream 100 bases:
>100_bases ATTTTTCCTTGTAAAACGTCAAAAATTGGACAGGGTTTCTGGGACTGCAATGAACTTTGGTGGGGTTTAAAGGTACTCCA GGAAAAGGGAGCTTGTTTGG
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSSSEKVSVGIVGASGYGGMQLVRLLSDHPQVELTYLGGNSSAGKPYAELYPHVGHRIKMIVEPIDLDVIASRCQVVFLG LPNGLACDLAPQLIERGCKVLDLSADYRFKDLDTYQAWYKTERTDQDTNAIAVYGLPELYRDDIRRAQLVGCPGCYVTAS LLALAPLFKQGLIQPETAIIDAKSGTSGGGRQGKINLLLAEADASLGAYGVASHRHTPEIEQICSKLASQDIRVQFTPHL IPMPRGILATVYATLRDPGLVRDDLLTIYSAFYRAAPCVEVLPNGVYPQTKWACGTNLCYLGIEVDHRTGRVIVMSAIDN LLKGQSGQAVQCMNIMLGWEETAGLPQLAFYP
Sequences:
>Translated_352_residues MSSSEKVSVGIVGASGYGGMQLVRLLSDHPQVELTYLGGNSSAGKPYAELYPHVGHRIKMIVEPIDLDVIASRCQVVFLG LPNGLACDLAPQLIERGCKVLDLSADYRFKDLDTYQAWYKTERTDQDTNAIAVYGLPELYRDDIRRAQLVGCPGCYVTAS LLALAPLFKQGLIQPETAIIDAKSGTSGGGRQGKINLLLAEADASLGAYGVASHRHTPEIEQICSKLASQDIRVQFTPHL IPMPRGILATVYATLRDPGLVRDDLLTIYSAFYRAAPCVEVLPNGVYPQTKWACGTNLCYLGIEVDHRTGRVIVMSAIDN LLKGQSGQAVQCMNIMLGWEETAGLPQLAFYP >Mature_351_residues SSSEKVSVGIVGASGYGGMQLVRLLSDHPQVELTYLGGNSSAGKPYAELYPHVGHRIKMIVEPIDLDVIASRCQVVFLGL PNGLACDLAPQLIERGCKVLDLSADYRFKDLDTYQAWYKTERTDQDTNAIAVYGLPELYRDDIRRAQLVGCPGCYVTASL LALAPLFKQGLIQPETAIIDAKSGTSGGGRQGKINLLLAEADASLGAYGVASHRHTPEIEQICSKLASQDIRVQFTPHLI PMPRGILATVYATLRDPGLVRDDLLTIYSAFYRAAPCVEVLPNGVYPQTKWACGTNLCYLGIEVDHRTGRVIVMSAIDNL LKGQSGQAVQCMNIMLGWEETAGLPQLAFYP
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=340, Percent_Identity=36.7647058823529, Blast_Score=191, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6320913, Length=350, Percent_Identity=29.1428571428571, Blast_Score=108, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_SYNP2 (B1XIA1)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001735341.1 - ProteinModelPortal: B1XIA1 - SMR: B1XIA1 - GeneID: 6055383 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A2102 - HOGENOM: HBG294213 - OMA: VCRIAVH - ProtClustDB: PRK00436 - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC
EC number: =1.2.1.38
Molecular weight: Translated: 38231; Mature: 38100
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 155-155
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSEKVSVGIVGASGYGGMQLVRLLSDHPQVELTYLGGNSSAGKPYAELYPHVGHRIKM CCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCCEEEE IVEPIDLDVIASRCQVVFLGLPNGLACDLAPQLIERGCKVLDLSADYRFKDLDTYQAWYK EEECCCHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHH TERTDQDTNAIAVYGLPELYRDDIRRAQLVGCPGCYVTASLLALAPLFKQGLIQPETAII CCCCCCCCCEEEEECCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEE DAKSGTSGGGRQGKINLLLAEADASLGAYGVASHRHTPEIEQICSKLASQDIRVQFTPHL ECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC IPMPRGILATVYATLRDPGLVRDDLLTIYSAFYRAAPCVEVLPNGVYPQTKWACGTNLCY CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEE LGIEVDHRTGRVIVMSAIDNLLKGQSGQAVQCMNIMLGWEETAGLPQLAFYP EEEEEECCCCCEEEHHHHHHHHCCCCCCEEEEEHEEECCHHHCCCCCCCCCC >Mature Secondary Structure SSSEKVSVGIVGASGYGGMQLVRLLSDHPQVELTYLGGNSSAGKPYAELYPHVGHRIKM CCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCCEEEE IVEPIDLDVIASRCQVVFLGLPNGLACDLAPQLIERGCKVLDLSADYRFKDLDTYQAWYK EEECCCHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHH TERTDQDTNAIAVYGLPELYRDDIRRAQLVGCPGCYVTASLLALAPLFKQGLIQPETAII CCCCCCCCCEEEEECCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEE DAKSGTSGGGRQGKINLLLAEADASLGAYGVASHRHTPEIEQICSKLASQDIRVQFTPHL ECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC IPMPRGILATVYATLRDPGLVRDDLLTIYSAFYRAAPCVEVLPNGVYPQTKWACGTNLCY CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEE LGIEVDHRTGRVIVMSAIDNLLKGQSGQAVQCMNIMLGWEETAGLPQLAFYP EEEEEECCCCCEEEHHHHHHHHCCCCCCEEEEEHEEECCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA