| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078687
Identifier: 170078687
GI number: 170078687
Start: 2164735
End: 2164986
Strand: Reverse
Name: 170078687
Synonym: SYNPCC7002_A2085
Alternate gene names: NA
Gene position: 2164986-2164735 (Counterclockwise)
Preceding gene: 170078688
Following gene: 170078686
Centisome position: 71.97
GC content: 43.65
Gene sequence:
>252_bases ATGCCCAGACAAGCAGACGAATACGCTATTTTTTTCCTGATCGAAGGTGGTCACCGCGAGGAAGTTCGCTTTAGCGACAT CAAAGAATTTCAAAAATGGTACAGCAGTGTTCTAATTCCCAAGGCTGAGGCCGACGACTTTATTAATGTGCCGATTAAGA ATATGCAGGGAGAATTTATGGTTGTTCGCCCTTCTAGTATCAAGGCCATTCGGGTAGAACCTGTATTTCTCGGTAGTATT GAGCGTTTCTAA
Upstream 100 bases:
>100_bases CACAGCCCTATGGCAGATCCCACAACCTGAGATACACTAGGTCAAGAATCAATTACCCTTTGGTTTTCCTGAATTTGACC CCTGCTGAGTACAAGACCCT
Downstream 100 bases:
>100_bases AATATTTCGTTCTCGGAATTATTTGAACTTCATCGGATCACATTGTCCAGTGATTTATCTGATACCGTACAGCTCAGAAT CGGCCCAGTTTCCTTTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MPRQADEYAIFFLIEGGHREEVRFSDIKEFQKWYSSVLIPKAEADDFINVPIKNMQGEFMVVRPSSIKAIRVEPVFLGSI ERF
Sequences:
>Translated_83_residues MPRQADEYAIFFLIEGGHREEVRFSDIKEFQKWYSSVLIPKAEADDFINVPIKNMQGEFMVVRPSSIKAIRVEPVFLGSI ERF >Mature_82_residues PRQADEYAIFFLIEGGHREEVRFSDIKEFQKWYSSVLIPKAEADDFINVPIKNMQGEFMVVRPSSIKAIRVEPVFLGSIE RF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9695; Mature: 9564
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRQADEYAIFFLIEGGHREEVRFSDIKEFQKWYSSVLIPKAEADDFINVPIKNMQGEFM CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCEE VVRPSSIKAIRVEPVFLGSIERF EECCCCCEEEEECEEEECCCCCC >Mature Secondary Structure PRQADEYAIFFLIEGGHREEVRFSDIKEFQKWYSSVLIPKAEADDFINVPIKNMQGEFM CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCEE VVRPSSIKAIRVEPVFLGSIERF EECCCCCEEEEECEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA