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The map label for this gene is clpS [H]

Identifier: 170078679

GI number: 170078679

Start: 2156731

End: 2157024

Strand: Reverse

Name: clpS [H]

Synonym: SYNPCC7002_A2075

Alternate gene names: 170078679

Gene position: 2157024-2156731 (Counterclockwise)

Preceding gene: 170078681

Following gene: 170078678

Centisome position: 71.71

GC content: 49.66

Gene sequence:

>294_bases
ATGGCCCCTGCTCCCGGTATTCTCAAAGAAAGCGATCGCCAAACAGTCCGTAAGCCTTACCCAAACTTTAAGGTGATTGT
CCTCAACGATGATTTCAATACCTTTGAGCATGTTGCCCATTGTTTAATGACCTACATCCCGAATATGACGGCGGATCAAG
CTTGGAATTTAACCAATCAAGTGCATTTCGACGGTCAGGCCATTGTCTGGGTAGGCCCCCAGGAACCAGCGGAACTTTAT
CACCAACAATTGCGACGGGAAGGTTTGACCATGGCTCCCCTTGAGGCGGCGTAG

Upstream 100 bases:

>100_bases
GGAAGCGATTCTGGTTAATCAGCCAAATGCTCCCACTATAAATTTTCTAACAAATTTGTTTTAACGTTCTTCGTCTATCC
CAAGGATTGATTCGGTTACC

Downstream 100 bases:

>100_bases
ATGGCATCAGAGGAAAAAGGAAGACTCGTTTGGAATCATTCGACCCACATTGAGGGGCTGATCCCAGTGCTCGAAAAATT
AGTCAACTGTGAGGGGATTC

Product: putative ATP-dependent Clp protease adaptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MAPAPGILKESDRQTVRKPYPNFKVIVLNDDFNTFEHVAHCLMTYIPNMTADQAWNLTNQVHFDGQAIVWVGPQEPAELY
HQQLRREGLTMAPLEAA

Sequences:

>Translated_97_residues
MAPAPGILKESDRQTVRKPYPNFKVIVLNDDFNTFEHVAHCLMTYIPNMTADQAWNLTNQVHFDGQAIVWVGPQEPAELY
HQQLRREGLTMAPLEAA
>Mature_96_residues
APAPGILKESDRQTVRKPYPNFKVIVLNDDFNTFEHVAHCLMTYIPNMTADQAWNLTNQVHFDGQAIVWVGPQEPAELYH
QQLRREGLTMAPLEAA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11048; Mature: 10916

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPAPGILKESDRQTVRKPYPNFKVIVLNDDFNTFEHVAHCLMTYIPNMTADQAWNLTNQ
CCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCE
VHFDGQAIVWVGPQEPAELYHQQLRREGLTMAPLEAA
EEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
APAPGILKESDRQTVRKPYPNFKVIVLNDDFNTFEHVAHCLMTYIPNMTADQAWNLTNQ
CCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCE
VHFDGQAIVWVGPQEPAELYHQQLRREGLTMAPLEAA
EEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]