Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078644

Identifier: 170078644

GI number: 170078644

Start: 2121297

End: 2121977

Strand: Reverse

Name: 170078644

Synonym: SYNPCC7002_A2040

Alternate gene names: NA

Gene position: 2121977-2121297 (Counterclockwise)

Preceding gene: 170078647

Following gene: 170078643

Centisome position: 70.54

GC content: 43.17

Gene sequence:

>681_bases
ATGGTTGCTTCGATGAAGAATGCGCGCCGGAAAGAGGCGATCGCCCCTTGGGTTCCGTCCCAGTGGGAAGCGTACCAACA
ACAGCGGGATTTGCCCACCGATGATCTTAATAAACAAAAGCTGTATTTTTATCAAAATTCATTATTAGTTGAAATGGGAA
AAGAAGGTCTGAATCATGCTTCTGTGAGTGATTTATTCACAATGTTATTTTTCGTGATTGCATCCCATTTTCAGCTTAAA
CTACGATCCTTTGGTCGTTGTCTGCTAGAAAAGCCGACTCAAAAAATTGCGGCTTCTCCGGATTTAATGCTTTTTCTTGG
GGAAGATTATCCGGTTTGGAAACAAGGCGATCGCCGTTATTTAAACTTAGATGAATGGCGCGTGCCAGATTTGGTGGGTG
AAATTTCTGACACGACAATTTTCCATGATTTAGACCGTAAAAAAGAAATTTACGCTGCGTTAGGTATCCCTGAATATTGG
GTGATTGATATCCAGGCTCAACGGTTTTTTCTCTTAGTTTTAAATGGGGCTGGACGCTATGAATCCGTTGAAACATCTCA
GGTTTTAAAGGACTTGCCGAAAGCAATATTAGAAGAAGCCCTAGAACGTGTTGCCTCAGACGGCAATGCCCAGGTGGCCC
AGTGGTTTATGGGACAATTGCAAGTCGAACAGCCCCAATGA

Upstream 100 bases:

>100_bases
TATATTTTGACTGAATCGAGTTTGTATCCCCCTAGTTTAAAAGGATGGCACGAAATTCAGATCTTACAATGGAGCTAATC
AATGCTCTGGAGGATAACCG

Downstream 100 bases:

>100_bases
TGTGGTTTTAGTTTTGGGAAATTGAAGGATTATTCGCTTTAATGGGGAATAATTGTTGTCAATCCAAAACTTTCTATGGC
TAGCGTAACGTTCGAGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MVASMKNARRKEAIAPWVPSQWEAYQQQRDLPTDDLNKQKLYFYQNSLLVEMGKEGLNHASVSDLFTMLFFVIASHFQLK
LRSFGRCLLEKPTQKIAASPDLMLFLGEDYPVWKQGDRRYLNLDEWRVPDLVGEISDTTIFHDLDRKKEIYAALGIPEYW
VIDIQAQRFFLLVLNGAGRYESVETSQVLKDLPKAILEEALERVASDGNAQVAQWFMGQLQVEQPQ

Sequences:

>Translated_226_residues
MVASMKNARRKEAIAPWVPSQWEAYQQQRDLPTDDLNKQKLYFYQNSLLVEMGKEGLNHASVSDLFTMLFFVIASHFQLK
LRSFGRCLLEKPTQKIAASPDLMLFLGEDYPVWKQGDRRYLNLDEWRVPDLVGEISDTTIFHDLDRKKEIYAALGIPEYW
VIDIQAQRFFLLVLNGAGRYESVETSQVLKDLPKAILEEALERVASDGNAQVAQWFMGQLQVEQPQ
>Mature_226_residues
MVASMKNARRKEAIAPWVPSQWEAYQQQRDLPTDDLNKQKLYFYQNSLLVEMGKEGLNHASVSDLFTMLFFVIASHFQLK
LRSFGRCLLEKPTQKIAASPDLMLFLGEDYPVWKQGDRRYLNLDEWRVPDLVGEISDTTIFHDLDRKKEIYAALGIPEYW
VIDIQAQRFFLLVLNGAGRYESVETSQVLKDLPKAILEEALERVASDGNAQVAQWFMGQLQVEQPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26116; Mature: 26116

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVASMKNARRKEAIAPWVPSQWEAYQQQRDLPTDDLNKQKLYFYQNSLLVEMGKEGLNHA
CCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCC
SVSDLFTMLFFVIASHFQLKLRSFGRCLLEKPTQKIAASPDLMLFLGEDYPVWKQGDRRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCCCCCCCEE
LNLDEWRVPDLVGEISDTTIFHDLDRKKEIYAALGIPEYWVIDIQAQRFFLLVLNGAGRY
ECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCC
ESVETSQVLKDLPKAILEEALERVASDGNAQVAQWFMGQLQVEQPQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVASMKNARRKEAIAPWVPSQWEAYQQQRDLPTDDLNKQKLYFYQNSLLVEMGKEGLNHA
CCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCC
SVSDLFTMLFFVIASHFQLKLRSFGRCLLEKPTQKIAASPDLMLFLGEDYPVWKQGDRRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCCCCCCCEE
LNLDEWRVPDLVGEISDTTIFHDLDRKKEIYAALGIPEYWVIDIQAQRFFLLVLNGAGRY
ECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCC
ESVETSQVLKDLPKAILEEALERVASDGNAQVAQWFMGQLQVEQPQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA