| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078639
Identifier: 170078639
GI number: 170078639
Start: 2116097
End: 2116786
Strand: Direct
Name: 170078639
Synonym: SYNPCC7002_A2035
Alternate gene names: NA
Gene position: 2116097-2116786 (Clockwise)
Preceding gene: 170078638
Following gene: 170078645
Centisome position: 70.35
GC content: 48.84
Gene sequence:
>690_bases ATGGAGGCAACCAGCGATTTACTGCAAGAATTTTCGGCATTATCGGCGAAAAAGCAGCTAGAACAAATCCCCCAACTGAT TGACCAAGGGGATGCTGGTTTTGCTTGCTTGAGAGAATTTTTGATGGCGCAACAGGGCCAGGCGGCAACCCCTGTCATGG GGAAAATTTGCCAAGTGCTCACCCAGAATCAAACCGCCGAAAATTTACTGTTCATGCAGCAGGAATTTCCGGAGGGGGTC GTTGAACTCAAGTCAGCGCGAGAGATTGATTACCAGATTATTCAAGACAAATTGATCGAAGAGGAGTTTCTGGAAGCAGA TATTTTAACCCTCCAGAAAATGTGTGAACTGGCAGGGGAATCTGCTATGAAACGAAAATGGCTCTACTTTACGGAGGTAG AGCGGTTTCCCGACGAGGATCTGCTCACCCTCGATCAGTTGTGGCAGGTTTATTCCGGCGGGAAATTTGGCTTTTCGGTA CAGCGTAAATTATGGAATTCCCTCGGTAAAGACTTCAATGCCCTCTGGGAAAAAATTGCTTGGCGGGATGGGAGAACCTG GGCGCGTTATCCCAAAGCATTTATTTGGAATCTGGATGCACCCAGGGGACATCTGCCCACCTCTAACCAGTTACGGGGCG CAAAAACGATCCTCGCGCTGTTCCAACATCCCGTGTGGACAAAGGACTAG
Upstream 100 bases:
>100_bases ATCGCTCTGCTTGACTCAATAGTAGATTTTGACGGCGATCGCCCACGCACTACATCCATCACAATTTTTTGACGCAACAC ATTGGGGAGACACAGTTTAC
Downstream 100 bases:
>100_bases GATTTCACTGAACCCGCTAAAATTCCCCGTACGAAATAGCGTTGTAGGCTGAAGAAAACGCCGAGGGGAACGATCATCGA GATAAAGGCTCCGGCAGTAA
Product: GUN4-like protein; putative Mg-protoporphyrin IX binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVLTQNQTAENLLFMQQEFPEGV VELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGESAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSV QRKLWNSLGKDFNALWEKIAWRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD
Sequences:
>Translated_229_residues MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVLTQNQTAENLLFMQQEFPEGV VELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGESAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSV QRKLWNSLGKDFNALWEKIAWRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD >Mature_229_residues MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVLTQNQTAENLLFMQQEFPEGV VELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGESAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSV QRKLWNSLGKDFNALWEKIAWRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf53 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016024 - InterPro: IPR008629 [H]
Pfam domain/function: PF05419 GUN4 [H]
EC number: NA
Molecular weight: Translated: 26410; Mature: 26410
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH TQNQTAENLLFMQQEFPEGVVELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSVQRKLWNSLGKDFNALWEKIA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHH WRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD HCCCCCHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH TQNQTAENLLFMQQEFPEGVVELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSVQRKLWNSLGKDFNALWEKIA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHH WRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD HCCCCCHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]