| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078631
Identifier: 170078631
GI number: 170078631
Start: 2107992
End: 2108375
Strand: Direct
Name: 170078631
Synonym: SYNPCC7002_A2027
Alternate gene names: NA
Gene position: 2107992-2108375 (Clockwise)
Preceding gene: 170078630
Following gene: 170078632
Centisome position: 70.08
GC content: 48.18
Gene sequence:
>384_bases ATGGCTGAATCTGGCGATCGCCTTGGTGAGAATCGTCTACGACAATTACGTCTTTACCTCTATTTGGTGCCGATTCTGGG TTTTTTTCCGGCATTATGGCAGCTCTATGGAAACAAAGGTGATCGCCGTGAACAACGCATTAGTCGCCAGGCGATTATGC TAATGCTGAGCTGGCTAAGCCTCTACCTGGGGTTAGGCTGGGGGAGTGACCATCTGGCGGGAATTGGCGGGTTTCGGATG ATGTATCTCAATGCCCTGCTGACGTCTGGATATTTTCTCGGTTGCTTTGTTTTGATGGTACGTGTTTGGCAAAAATCCGC TAAAACGACCCCGACAAACACTGATCAGATGGCCGACAATTTCGAGGAATATTTTCTGAAGTAA
Upstream 100 bases:
>100_bases GGCCAACGGCGTTGTTAAATCCGGTGTTGTCCCGCTGGGGAAAGCTGGAGCATTAAGAACTTAAGCTAGGATAAATGTAG TCCCTGCGGAGTCGAGATCT
Downstream 100 bases:
>100_bases AACTCACCAAAAGTGGAACCTCTGGTTTAGCATAGCTATCAAAGTATTTCGTCCCGCAATTTTTAGTGTGGTCTTTCCGG TGTGAGGAAACCTGTGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAESGDRLGENRLRQLRLYLYLVPILGFFPALWQLYGNKGDRREQRISRQAIMLMLSWLSLYLGLGWGSDHLAGIGGFRM MYLNALLTSGYFLGCFVLMVRVWQKSAKTTPTNTDQMADNFEEYFLK
Sequences:
>Translated_127_residues MAESGDRLGENRLRQLRLYLYLVPILGFFPALWQLYGNKGDRREQRISRQAIMLMLSWLSLYLGLGWGSDHLAGIGGFRM MYLNALLTSGYFLGCFVLMVRVWQKSAKTTPTNTDQMADNFEEYFLK >Mature_126_residues AESGDRLGENRLRQLRLYLYLVPILGFFPALWQLYGNKGDRREQRISRQAIMLMLSWLSLYLGLGWGSDHLAGIGGFRMM YLNALLTSGYFLGCFVLMVRVWQKSAKTTPTNTDQMADNFEEYFLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14713; Mature: 14582
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESGDRLGENRLRQLRLYLYLVPILGFFPALWQLYGNKGDRREQRISRQAIMLMLSWLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LYLGLGWGSDHLAGIGGFRMMYLNALLTSGYFLGCFVLMVRVWQKSAKTTPTNTDQMADN HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FEEYFLK HHHHHCC >Mature Secondary Structure AESGDRLGENRLRQLRLYLYLVPILGFFPALWQLYGNKGDRREQRISRQAIMLMLSWLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LYLGLGWGSDHLAGIGGFRMMYLNALLTSGYFLGCFVLMVRVWQKSAKTTPTNTDQMADN HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FEEYFLK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA