| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is livG [H]
Identifier: 170078600
GI number: 170078600
Start: 2076763
End: 2077539
Strand: Reverse
Name: livG [H]
Synonym: SYNPCC7002_A1996
Alternate gene names: 170078600
Gene position: 2077539-2076763 (Counterclockwise)
Preceding gene: 170078602
Following gene: 170078599
Centisome position: 69.07
GC content: 49.94
Gene sequence:
>777_bases ATGCCGGATTTAGCCATCCCCATCCTCAACGTTCAACATTTGACCCGGCGCTTCGGGGGCTTGGTGGCGGTACATGATGT GTCTTTTCAGGTGGCCCCAAGGGAAATTTTCGGCTTGATTGGGCCAAATGGGGCGGGCAAAACAACTTTTTTTAATCTGT TGACTGGGATGATTCCCCCTTCCCAAGGAAACATTCTGTACCAAGGCCGCAAGATTCACGGTCTGGCTCCCCACCAAATT GCCGCCTCTGGTATTGCGCGGACGTTTCAAAATCTGCGCTTGTTTGGAAATTTGTCGGCCCTCGAAAATGTGGCGATCGC CCGCCATCTGCACCAAAAAAACAATATTTTTGAAGGAATTTTAGGTTTACCCAAAGCGAAAAAAGCTGAGCAAGAAACCT ACGACCGGGCGAAGGAATTGCTAGATTTGGTGGGCTTAACCGGAAAATACCGTCAACAGGCAAAAAATTTTTCCTATGGT GATCAGCGGCGTTTAGAAATTGCCCGCGCCTTGGCCCTAGAACCCCAGCTTTTACTCCTCGATGAACCCGCTGCCGGGAT GAACCCCAACGAAAAAGGCGCTTTGAGTGATTTGATTCGACAAATTCGGGCGCAATTTGACCTGACGATTCTGTTGATTG AGCATCATATTCCCCTGGTGATGGGACTGTGCGATCGCCTGGCGGTGTTGGACTTTGGCGAACTGATTGCCCTCGGTTTA CCAGAGGATGTAAAGGCAGATCCAGCGGTGATTGAAGCGTATTTGGGGGATGAGTAA
Upstream 100 bases:
>100_bases CAATCACCTGGGGAGATTTTTGGCGATCGCCGACTCAATAATCCCGTTAATTTCCCCCCTAGATGCCGCTAAAATAAGCT TGATTTAATCGGTCAAGCCT
Downstream 100 bases:
>100_bases ATGTTGGAACTCATTGATGTCTCAGTCAATTACGGTGGTATCGAAGCCCTGAAAAATATCCACTTAACGGTCAATGCCGG GGAAATTGTCACCCTGATCG
Product: ABC transporter family protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPDLAIPILNVQHLTRRFGGLVAVHDVSFQVAPREIFGLIGPNGAGKTTFFNLLTGMIPPSQGNILYQGRKIHGLAPHQI AASGIARTFQNLRLFGNLSALENVAIARHLHQKNNIFEGILGLPKAKKAEQETYDRAKELLDLVGLTGKYRQQAKNFSYG DQRRLEIARALALEPQLLLLDEPAAGMNPNEKGALSDLIRQIRAQFDLTILLIEHHIPLVMGLCDRLAVLDFGELIALGL PEDVKADPAVIEAYLGDE
Sequences:
>Translated_258_residues MPDLAIPILNVQHLTRRFGGLVAVHDVSFQVAPREIFGLIGPNGAGKTTFFNLLTGMIPPSQGNILYQGRKIHGLAPHQI AASGIARTFQNLRLFGNLSALENVAIARHLHQKNNIFEGILGLPKAKKAEQETYDRAKELLDLVGLTGKYRQQAKNFSYG DQRRLEIARALALEPQLLLLDEPAAGMNPNEKGALSDLIRQIRAQFDLTILLIEHHIPLVMGLCDRLAVLDFGELIALGL PEDVKADPAVIEAYLGDE >Mature_257_residues PDLAIPILNVQHLTRRFGGLVAVHDVSFQVAPREIFGLIGPNGAGKTTFFNLLTGMIPPSQGNILYQGRKIHGLAPHQIA ASGIARTFQNLRLFGNLSALENVAIARHLHQKNNIFEGILGLPKAKKAEQETYDRAKELLDLVGLTGKYRQQAKNFSYGD QRRLEIARALALEPQLLLLDEPAAGMNPNEKGALSDLIRQIRAQFDLTILLIEHHIPLVMGLCDRLAVLDFGELIALGLP EDVKADPAVIEAYLGDE
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=227, Percent_Identity=32.15859030837, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI30795238, Length=227, Percent_Identity=32.15859030837, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI116734710, Length=253, Percent_Identity=30.8300395256917, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI105990541, Length=238, Percent_Identity=28.1512605042017, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI31657092, Length=262, Percent_Identity=28.2442748091603, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI27262624, Length=225, Percent_Identity=27.5555555555556, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI27262626, Length=225, Percent_Identity=27.5555555555556, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI6005701, Length=226, Percent_Identity=27.8761061946903, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI150417984, Length=246, Percent_Identity=29.2682926829268, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI27477115, Length=226, Percent_Identity=27.4336283185841, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI153792144, Length=224, Percent_Identity=26.3392857142857, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI47078218, Length=231, Percent_Identity=30.7359307359307, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI45446740, Length=231, Percent_Identity=30.7359307359307, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI21536376, Length=236, Percent_Identity=30.0847457627119, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI27436953, Length=248, Percent_Identity=27.4193548387097, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI215820660, Length=229, Percent_Identity=25.764192139738, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI20143975, Length=229, Percent_Identity=25.764192139738, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789864, Length=254, Percent_Identity=47.6377952755905, Blast_Score=249, Evalue=9e-68, Organism=Escherichia coli, GI87081709, Length=252, Percent_Identity=30.1587301587302, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1789593, Length=253, Percent_Identity=33.596837944664, Blast_Score=127, Evalue=5e-31, Organism=Escherichia coli, GI1786398, Length=228, Percent_Identity=32.8947368421053, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1788225, Length=256, Percent_Identity=31.25, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1790525, Length=248, Percent_Identity=31.0483870967742, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI87081791, Length=244, Percent_Identity=28.2786885245902, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI87081782, Length=261, Percent_Identity=30.2681992337165, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87082268, Length=249, Percent_Identity=31.3253012048193, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI48995001, Length=229, Percent_Identity=31.0043668122271, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1789032, Length=244, Percent_Identity=27.8688524590164, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1788450, Length=243, Percent_Identity=28.3950617283951, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1790190, Length=230, Percent_Identity=28.2608695652174, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI48994997, Length=256, Percent_Identity=28.125, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787029, Length=242, Percent_Identity=26.8595041322314, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1789991, Length=246, Percent_Identity=29.2682926829268, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1788761, Length=248, Percent_Identity=25.4032258064516, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786563, Length=226, Percent_Identity=30.9734513274336, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788472, Length=231, Percent_Identity=26.4069264069264, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787712, Length=236, Percent_Identity=27.1186440677966, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787500, Length=231, Percent_Identity=27.7056277056277, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI48994943, Length=245, Percent_Identity=28.1632653061224, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788165, Length=247, Percent_Identity=27.9352226720648, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI87082267, Length=244, Percent_Identity=25, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1790162, Length=257, Percent_Identity=28.0155642023346, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1790467, Length=241, Percent_Identity=23.6514522821577, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789891, Length=243, Percent_Identity=30.0411522633745, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI87081834, Length=237, Percent_Identity=27.8481012658228, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI145693107, Length=258, Percent_Identity=28.2945736434109, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786319, Length=239, Percent_Identity=25.5230125523013, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787792, Length=258, Percent_Identity=26.3565891472868, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786345, Length=234, Percent_Identity=28.2051282051282, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789672, Length=242, Percent_Identity=24.3801652892562, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787758, Length=229, Percent_Identity=28.82096069869, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789586, Length=250, Percent_Identity=28.4, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1788210, Length=232, Percent_Identity=25, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790544, Length=248, Percent_Identity=28.2258064516129, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786872, Length=233, Percent_Identity=25.3218884120172, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787370, Length=248, Percent_Identity=25, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI48994883, Length=254, Percent_Identity=25.1968503937008, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788506, Length=232, Percent_Identity=29.3103448275862, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1789873, Length=234, Percent_Identity=29.4871794871795, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788644, Length=256, Percent_Identity=28.515625, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786803, Length=240, Percent_Identity=24.5833333333333, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786703, Length=244, Percent_Identity=27.8688524590164, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1787089, Length=230, Percent_Identity=26.5217391304348, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789962, Length=229, Percent_Identity=25.764192139738, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787547, Length=230, Percent_Identity=24.3478260869565, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788897, Length=234, Percent_Identity=23.9316239316239, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786253, Length=244, Percent_Identity=24.5901639344262, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787041, Length=249, Percent_Identity=27.3092369477912, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786975, Length=197, Percent_Identity=28.4263959390863, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786654, Length=218, Percent_Identity=25.6880733944954, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787164, Length=231, Percent_Identity=24.6753246753247, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787759, Length=259, Percent_Identity=25.8687258687259, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787105, Length=240, Percent_Identity=23.75, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71983523, Length=238, Percent_Identity=31.0924369747899, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71983516, Length=238, Percent_Identity=31.0924369747899, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71983510, Length=238, Percent_Identity=31.0924369747899, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17510237, Length=244, Percent_Identity=29.9180327868852, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI115533608, Length=226, Percent_Identity=32.7433628318584, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17565586, Length=234, Percent_Identity=26.0683760683761, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17565938, Length=221, Percent_Identity=24.4343891402715, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17511077, Length=220, Percent_Identity=25, Blast_Score=68, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6321752, Length=247, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323014, Length=240, Percent_Identity=25.8333333333333, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322980, Length=222, Percent_Identity=26.5765765765766, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI24643674, Length=231, Percent_Identity=32.034632034632, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24666092, Length=244, Percent_Identity=33.1967213114754, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI28574150, Length=231, Percent_Identity=30.7359307359307, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI116007328, Length=231, Percent_Identity=30.7359307359307, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI221512771, Length=237, Percent_Identity=29.535864978903, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24648314, Length=231, Percent_Identity=26.8398268398268, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24641565, Length=221, Percent_Identity=25.7918552036199, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24650855, Length=194, Percent_Identity=27.319587628866, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24650853, Length=194, Percent_Identity=27.319587628866, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007184, Length=234, Percent_Identity=26.4957264957265, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI221500365, Length=234, Percent_Identity=26.4957264957265, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552437, Length=220, Percent_Identity=27.7272727272727, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI85725262, Length=208, Percent_Identity=27.4038461538462, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24585557, Length=220, Percent_Identity=27.7272727272727, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45550390, Length=227, Percent_Identity=26.8722466960352, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24582014, Length=196, Percent_Identity=27.0408163265306, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582012, Length=196, Percent_Identity=27.0408163265306, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI281362751, Length=194, Percent_Identity=27.319587628866, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574533, Length=217, Percent_Identity=25.3456221198157, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28329; Mature: 28198
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3 ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLAIPILNVQHLTRRFGGLVAVHDVSFQVAPREIFGLIGPNGAGKTTFFNLLTGMIPP CCCCCCHHHHHHHHHHHHCCEEEEEECCEEECHHHHHHEECCCCCCHHHHHHHHHHCCCC SQGNILYQGRKIHGLAPHQIAASGIARTFQNLRLFGNLSALENVAIARHLHQKNNIFEGI CCCCEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHH LGLPKAKKAEQETYDRAKELLDLVGLTGKYRQQAKNFSYGDQRRLEIARALALEPQLLLL HCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEE DEPAAGMNPNEKGALSDLIRQIRAQFDLTILLIEHHIPLVMGLCDRLAVLDFGELIALGL ECCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHHHHCHHHHHEECC PEDVKADPAVIEAYLGDE CCCCCCCHHHHHHHCCCC >Mature Secondary Structure PDLAIPILNVQHLTRRFGGLVAVHDVSFQVAPREIFGLIGPNGAGKTTFFNLLTGMIPP CCCCCHHHHHHHHHHHHCCEEEEEECCEEECHHHHHHEECCCCCCHHHHHHHHHHCCCC SQGNILYQGRKIHGLAPHQIAASGIARTFQNLRLFGNLSALENVAIARHLHQKNNIFEGI CCCCEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHH LGLPKAKKAEQETYDRAKELLDLVGLTGKYRQQAKNFSYGDQRRLEIARALALEPQLLLL HCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEE DEPAAGMNPNEKGALSDLIRQIRAQFDLTILLIEHHIPLVMGLCDRLAVLDFGELIALGL ECCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHHHHCHHHHHEECC PEDVKADPAVIEAYLGDE CCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]