| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078574
Identifier: 170078574
GI number: 170078574
Start: 2052360
End: 2052914
Strand: Direct
Name: 170078574
Synonym: SYNPCC7002_A1969
Alternate gene names: NA
Gene position: 2052360-2052914 (Clockwise)
Preceding gene: 170078573
Following gene: 170078575
Centisome position: 68.23
GC content: 52.07
Gene sequence:
>555_bases ATGAGTATTGATCAAATTGTTGAACAAGCCCTAAAAGACGGCTATCTCACCCCGAGCATGGAAGCGGAAGTTGGACGCAT TTGCGATATGTCCTCTGAGCTTTCCATTGAGGAATATATGGCGCTAGATCGCCTCATGGGGGCTTTGCTCACGGGGGAAG TGATTGCTGTCCCCCGGAAACAATTCATCAATGTCATGGAGGAGCTAGTCATTAGCCGCTCCATTGCCCGGGTCGCTGAG ATCGAGGCGAGTAGCACCCAAAGTTTGGATGTGGGGGATATTGCGGCCTATGCCCTAAACCGTTTGCCGCCGCTCTACGC AACGACGGAAGAGAGAGCGAATTATCAGCGTCAAAAGGCCCGTGAGGAATTGCAGGGTTTAATTAATGAACAGGTGGATG CAGCCCTGTCTCGCTATCTAGACCGACCGGACTTTTTCCCTGAGCGCCAGGCGATCACCTCTCCGAACCAAGACAAGAGC ATGTTAGCCCAGGTCAGTAAGCTCCTGGAAGGCTATGCACCGGGCTTTGAACAGGAAGAGAATGTGTTTTCCTAG
Upstream 100 bases:
>100_bases ATGGGATGTACTTTCTTAGAGAATCGTGGTTTTTCCCCGATTTTTACGCAAAGATAGTGAAGTGATTGGCCCCCTTGTCC CGGAATTTTCCAAGAAACCT
Downstream 100 bases:
>100_bases GACTAGGGGCTGACACTTAGAGCTAGGGGCTGGAACTTTTTTCTGGGCCGTAGGGTCTTTACAAGAAGAAGTCCCGTTAT GAGTTCTTTGTGAAGAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSIDQIVEQALKDGYLTPSMEAEVGRICDMSSELSIEEYMALDRLMGALLTGEVIAVPRKQFINVMEELVISRSIARVAE IEASSTQSLDVGDIAAYALNRLPPLYATTEERANYQRQKAREELQGLINEQVDAALSRYLDRPDFFPERQAITSPNQDKS MLAQVSKLLEGYAPGFEQEENVFS
Sequences:
>Translated_184_residues MSIDQIVEQALKDGYLTPSMEAEVGRICDMSSELSIEEYMALDRLMGALLTGEVIAVPRKQFINVMEELVISRSIARVAE IEASSTQSLDVGDIAAYALNRLPPLYATTEERANYQRQKAREELQGLINEQVDAALSRYLDRPDFFPERQAITSPNQDKS MLAQVSKLLEGYAPGFEQEENVFS >Mature_183_residues SIDQIVEQALKDGYLTPSMEAEVGRICDMSSELSIEEYMALDRLMGALLTGEVIAVPRKQFINVMEELVISRSIARVAEI EASSTQSLDVGDIAAYALNRLPPLYATTEERANYQRQKAREELQGLINEQVDAALSRYLDRPDFFPERQAITSPNQDKSM LAQVSKLLEGYAPGFEQEENVFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20613; Mature: 20481
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDQIVEQALKDGYLTPSMEAEVGRICDMSSELSIEEYMALDRLMGALLTGEVIAVPRK CCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCHH QFINVMEELVISRSIARVAEIEASSTQSLDVGDIAAYALNRLPPLYATTEERANYQRQKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH REELQGLINEQVDAALSRYLDRPDFFPERQAITSPNQDKSMLAQVSKLLEGYAPGFEQEE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC NVFS CCCC >Mature Secondary Structure SIDQIVEQALKDGYLTPSMEAEVGRICDMSSELSIEEYMALDRLMGALLTGEVIAVPRK CHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCHH QFINVMEELVISRSIARVAEIEASSTQSLDVGDIAAYALNRLPPLYATTEERANYQRQKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH REELQGLINEQVDAALSRYLDRPDFFPERQAITSPNQDKSMLAQVSKLLEGYAPGFEQEE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC NVFS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA