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The map label for this gene is ybbM [C]

Identifier: 170078572

GI number: 170078572

Start: 2050290

End: 2051060

Strand: Direct

Name: ybbM [C]

Synonym: SYNPCC7002_A1967

Alternate gene names: 170078572

Gene position: 2050290-2051060 (Clockwise)

Preceding gene: 170078570

Following gene: 170078573

Centisome position: 68.16

GC content: 50.58

Gene sequence:

>771_bases
ATGGGTGAATTTATTGCCTTAGATCCGGGAGATTTGGGCTGGGCGTTGGGACTAATTGCCTTGGCGATCGCCCTGGCCCG
GTGGCAAAAGTTGGGGCTAGAGGGGCAGCTTTTACTCGCAACGGGACGGACAATTTTGCAATTGTTGGTGGTGGGCTATG
CCCTGGAAATGGTCTTTGCCTTGGCGCACCCATTGGCGGTGTTAGGGATTGTTTTGGTGATGTTAACCATTGCGGCGATC
GCCGCGAAAAATCGGATTAACGATCGGGTTGAATTGCCATTGATCTGGGGATCAATTTTTATCAGTTTCAGTGTGCCGTT
GGCGTATACCCTATTGGTAATTGTGCAGCCGGAGACTTGGTATGACCCCCAATATTTGATTCCGTTGGCAGGGATGGTCT
TGGGGAACGCGATGAATAGTGCTTCCTTGGCGGGAGAACGGCTCAGCAGTCGGATTAAAACCAGTCGTTTGGAAATCGAA
ACCCAGCTTTGTCTCGGCGCAACCCCCAAACAGGCGATCGCCAGCTACCGTACCGAAGCGATCCGCGCCAGCCTAATCCC
GACGATCAATTCTATGATGGTAGTAGGTTTAGTGAGTTTGCCGGGGATGTTTACGGGGCAAGTCTTATCGGGCATTGATC
CGCTTAATGCTGCCTCCTATCAAATTTTGATTCTCTTTTTGATTGTGACCATTAACCTCATCTGTACTTCCCTGGTGACT
GAGGGCCTTTATCGACAATTTTTTAACCCCACTGCCCAGCTCACCCTCTAA

Upstream 100 bases:

>100_bases
AGGAATTTGGCTCATGGGTGACGGTGATTTTTTGGGTAGGAATTCGCATAAAAGCGTAAATATAAATGTTATAGGTTATG
GGAGTGAAAAAAAAAAGCGC

Downstream 100 bases:

>100_bases
GTTTTGCTCCTCGCCAATCCTTGCTAGACTGAGTTTCCACATTTGTTGCGATCTATCTCTCACGGAAAAACGACCATGTT
TGCTGCTGCCGCTGCCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MGEFIALDPGDLGWALGLIALAIALARWQKLGLEGQLLLATGRTILQLLVVGYALEMVFALAHPLAVLGIVLVMLTIAAI
AAKNRINDRVELPLIWGSIFISFSVPLAYTLLVIVQPETWYDPQYLIPLAGMVLGNAMNSASLAGERLSSRIKTSRLEIE
TQLCLGATPKQAIASYRTEAIRASLIPTINSMMVVGLVSLPGMFTGQVLSGIDPLNAASYQILILFLIVTINLICTSLVT
EGLYRQFFNPTAQLTL

Sequences:

>Translated_256_residues
MGEFIALDPGDLGWALGLIALAIALARWQKLGLEGQLLLATGRTILQLLVVGYALEMVFALAHPLAVLGIVLVMLTIAAI
AAKNRINDRVELPLIWGSIFISFSVPLAYTLLVIVQPETWYDPQYLIPLAGMVLGNAMNSASLAGERLSSRIKTSRLEIE
TQLCLGATPKQAIASYRTEAIRASLIPTINSMMVVGLVSLPGMFTGQVLSGIDPLNAASYQILILFLIVTINLICTSLVT
EGLYRQFFNPTAQLTL
>Mature_255_residues
GEFIALDPGDLGWALGLIALAIALARWQKLGLEGQLLLATGRTILQLLVVGYALEMVFALAHPLAVLGIVLVMLTIAAIA
AKNRINDRVELPLIWGSIFISFSVPLAYTLLVIVQPETWYDPQYLIPLAGMVLGNAMNSASLAGERLSSRIKTSRLEIET
QLCLGATPKQAIASYRTEAIRASLIPTINSMMVVGLVSLPGMFTGQVLSGIDPLNAASYQILILFLIVTINLICTSLVTE
GLYRQFFNPTAQLTL

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=247, Percent_Identity=38.4615384615385, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 27622; Mature: 27491

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEFIALDPGDLGWALGLIALAIALARWQKLGLEGQLLLATGRTILQLLVVGYALEMVFA
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
LAHPLAVLGIVLVMLTIAAIAAKNRINDRVELPLIWGSIFISFSVPLAYTLLVIVQPETW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHEEECCCCC
YDPQYLIPLAGMVLGNAMNSASLAGERLSSRIKTSRLEIETQLCLGATPKQAIASYRTEA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IRASLIPTINSMMVVGLVSLPGMFTGQVLSGIDPLNAASYQILILFLIVTINLICTSLVT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGLYRQFFNPTAQLTL
HHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GEFIALDPGDLGWALGLIALAIALARWQKLGLEGQLLLATGRTILQLLVVGYALEMVFA
CCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
LAHPLAVLGIVLVMLTIAAIAAKNRINDRVELPLIWGSIFISFSVPLAYTLLVIVQPETW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHEEECCCCC
YDPQYLIPLAGMVLGNAMNSASLAGERLSSRIKTSRLEIETQLCLGATPKQAIASYRTEA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IRASLIPTINSMMVVGLVSLPGMFTGQVLSGIDPLNAASYQILILFLIVTINLICTSLVT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGLYRQFFNPTAQLTL
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]