| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078537
Identifier: 170078537
GI number: 170078537
Start: 2015753
End: 2015881
Strand: Reverse
Name: 170078537
Synonym: SYNPCC7002_A1932
Alternate gene names: NA
Gene position: 2015881-2015753 (Counterclockwise)
Preceding gene: 170078542
Following gene: 170078536
Centisome position: 67.02
GC content: 36.43
Gene sequence:
>129_bases TTGCGTCAATTCGTTTTTAGCGATTCTTCCCCCAAGAAGTTGCTCAAAGTGAACAAAGCAATGAGTAAAAATACTTGTTT GTCTGGATTTCTAGATAAAATCAGTAAAAATCAGGGACAGCCAAACTAG
Upstream 100 bases:
>100_bases CTGAACAGTTTTGACAATTAATACTGGGCTGAATTTCTACTGATGCAGAAATGCCCGGCTAACTATTACATATTGTAAAC AATTATTGACAACTGTGTGA
Downstream 100 bases:
>100_bases CAGTAGGGAGAAATGTCTTCGTGGTACAGGAATTTCGTTTGGGGTGTGCAGTCTGGGCCTACCGGGGTTGGTTAGGGGAT TTTTACCCAAGGGGCAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MRQFVFSDSSPKKLLKVNKAMSKNTCLSGFLDKISKNQGQPN
Sequences:
>Translated_42_residues MRQFVFSDSSPKKLLKVNKAMSKNTCLSGFLDKISKNQGQPN >Mature_42_residues MRQFVFSDSSPKKLLKVNKAMSKNTCLSGFLDKISKNQGQPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4717; Mature: 4717
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQFVFSDSSPKKLLKVNKAMSKNTCLSGFLDKISKNQGQPN CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRQFVFSDSSPKKLLKVNKAMSKNTCLSGFLDKISKNQGQPN CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA