| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078483
Identifier: 170078483
GI number: 170078483
Start: 1966909
End: 1967157
Strand: Direct
Name: 170078483
Synonym: SYNPCC7002_A1877
Alternate gene names: NA
Gene position: 1966909-1967157 (Clockwise)
Preceding gene: 170078482
Following gene: 170078488
Centisome position: 65.39
GC content: 52.61
Gene sequence:
>249_bases GTGCCTGAGCCTGACAAGGACAAGCTTTTCAAAATCGCCATGGCGAAAGATGGCATTCAGGCGGCGGATGTGGCCTACTA CTTCCTGTTGTTTTTGCCCTTGGTGACGGGGATAGTGGGCTTTTATTTTTGGGGAAAGGCGATCTTGTTTTATCCAGACA TCCCGGAACAACGGCTGAAGCCCCTGCTCTGGGTGAGCTGCGTTTTGATGGGCGTTCCCGTTGCTGGGGAGTTTTGGCGA CGGAAATAA
Upstream 100 bases:
>100_bases TTTGCCGCACCTTACAAGAGAAATGGGGCCTTGAGGTGGACGGGGTGATCGGCCCAATTACCTGGGAGCGGACTTTTAAG CCCAGCAGAGAGGTTTAGCC
Downstream 100 bases:
>100_bases GATTATTCGAACAAGGAAAGTTGACCATCAACCTGCTTTTTAAGGAAGCGCGTCCGTGAGGCGTTTTTGAGGTGGTGACT GTGATCGTTTCGGAGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPEPDKDKLFKIAMAKDGIQAADVAYYFLLFLPLVTGIVGFYFWGKAILFYPDIPEQRLKPLLWVSCVLMGVPVAGEFWR RK
Sequences:
>Translated_82_residues MPEPDKDKLFKIAMAKDGIQAADVAYYFLLFLPLVTGIVGFYFWGKAILFYPDIPEQRLKPLLWVSCVLMGVPVAGEFWR RK >Mature_81_residues PEPDKDKLFKIAMAKDGIQAADVAYYFLLFLPLVTGIVGFYFWGKAILFYPDIPEQRLKPLLWVSCVLMGVPVAGEFWRR K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9440; Mature: 9309
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPDKDKLFKIAMAKDGIQAADVAYYFLLFLPLVTGIVGFYFWGKAILFYPDIPEQRLK CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHH PLLWVSCVLMGVPVAGEFWRRK HHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure PEPDKDKLFKIAMAKDGIQAADVAYYFLLFLPLVTGIVGFYFWGKAILFYPDIPEQRLK CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHH PLLWVSCVLMGVPVAGEFWRRK HHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA