| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078476
Identifier: 170078476
GI number: 170078476
Start: 1963536
End: 1964312
Strand: Direct
Name: 170078476
Synonym: SYNPCC7002_A1870
Alternate gene names: NA
Gene position: 1963536-1964312 (Clockwise)
Preceding gene: 170078471
Following gene: 170078477
Centisome position: 65.28
GC content: 55.6
Gene sequence:
>777_bases ATGGCTTTAACGTTCTTTGAAAGTTCCGTGAGCGCAGGGGCATCTAACGGGGTTCCCGCTGGTTTGTTTTTACCGATCGC CGATTTGCCTGGGGTAGTTGCGGGGGAGTTTGCTGACAGCGAGACCCAAGCCACTAAGGAAAGCAAAGCAGCTCTCGCCA TTGCCAACGCGATCCATACCTATGTTTCCGCCAACAGCGCCGACATTGTGGGCATGACTTCCACGCGGGCTAAGGCTTCT GTTTCCGACAGCTTGGATAACCTGACTTATTCCTTTGCTTGCCAATACATTGCCGATTTAGAAACTGAGACGGTGGGCCA GATCCCCTTGCCTGCTTCTGGGGCGAATTCCGGCATCGGCGGGTTCGCAATTGATGACCTTTTCGCCAATGCTGCCGAGG TTGCTGCTGAGGGCGCGATTTCTGGAGAAGGCGTCGTGATTCCCTACGCTGACCTGGCTGATTTTGGTGGTGCTGATCCG GCGGCGATCACCGGCGTTGATAACCGTGATTTCGTCGCGGCCATGATTCGTTCCATGCCCGATCTATTGCCGATTCGGAC TGCTTCCGTTGCCTCTGGGGTGACCACTACTACCCGACCCGCAGGAACGACCTTTACCCTGGCACCTGCGGCCACCGCTG AGACTGACCCCACCACTGGGATCGCCGCAGCAGATTTACCTAAACTTGGTTTGCTTCAGTTCACGACTTCTTGGACGGTG CAAGTTGCCCTTGACCAAGCGGCCCAAACCTTCGACGTAAATGTAGTCACCCTTTAG
Upstream 100 bases:
>100_bases AGTACGTGACACTAACAGGTTCGATTGCTAGAGTTTAGACAACACAAGCTTTCTAGCGTTTTTGGGATGAATCGCTAGGG ACTATTTGAGGATTTTTTTC
Downstream 100 bases:
>100_bases GCTTAATCTCCGGTTTTAAAGGGGAATAAATTATTTATTTTGAGGTTTACAAATGGCTAGAAATCGTGAAACTGCAACGT TAGTATTCGTCACCATGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHTYVSANSADIVGMTSTRAKAS VSDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIGGFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADP AAITGVDNRDFVAAMIRSMPDLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTV QVALDQAAQTFDVNVVTL
Sequences:
>Translated_258_residues MALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHTYVSANSADIVGMTSTRAKAS VSDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIGGFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADP AAITGVDNRDFVAAMIRSMPDLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTV QVALDQAAQTFDVNVVTL >Mature_257_residues ALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHTYVSANSADIVGMTSTRAKASV SDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIGGFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADPA AITGVDNRDFVAAMIRSMPDLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTVQ VALDQAAQTFDVNVVTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26028; Mature: 25897
Theoretical pI: Translated: 3.74; Mature: 3.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHT CEEEEECCHHCCCCCCCCCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH YVSANSADIVGMTSTRAKASVSDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIG HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADPAAITGVDNRDFVAAMIRSMP CHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCEEECCCCCHHHHHHHHHCC DLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTV CCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCEEEEECCEEE QVALDQAAQTFDVNVVTL EEEECCCCCEEEEEEEEC >Mature Secondary Structure ALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHT EEEEECCHHCCCCCCCCCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH YVSANSADIVGMTSTRAKASVSDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIG HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADPAAITGVDNRDFVAAMIRSMP CHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCEEECCCCCHHHHHHHHHCC DLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTV CCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCEEEEECCEEE QVALDQAAQTFDVNVVTL EEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA