Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078476

Identifier: 170078476

GI number: 170078476

Start: 1963536

End: 1964312

Strand: Direct

Name: 170078476

Synonym: SYNPCC7002_A1870

Alternate gene names: NA

Gene position: 1963536-1964312 (Clockwise)

Preceding gene: 170078471

Following gene: 170078477

Centisome position: 65.28

GC content: 55.6

Gene sequence:

>777_bases
ATGGCTTTAACGTTCTTTGAAAGTTCCGTGAGCGCAGGGGCATCTAACGGGGTTCCCGCTGGTTTGTTTTTACCGATCGC
CGATTTGCCTGGGGTAGTTGCGGGGGAGTTTGCTGACAGCGAGACCCAAGCCACTAAGGAAAGCAAAGCAGCTCTCGCCA
TTGCCAACGCGATCCATACCTATGTTTCCGCCAACAGCGCCGACATTGTGGGCATGACTTCCACGCGGGCTAAGGCTTCT
GTTTCCGACAGCTTGGATAACCTGACTTATTCCTTTGCTTGCCAATACATTGCCGATTTAGAAACTGAGACGGTGGGCCA
GATCCCCTTGCCTGCTTCTGGGGCGAATTCCGGCATCGGCGGGTTCGCAATTGATGACCTTTTCGCCAATGCTGCCGAGG
TTGCTGCTGAGGGCGCGATTTCTGGAGAAGGCGTCGTGATTCCCTACGCTGACCTGGCTGATTTTGGTGGTGCTGATCCG
GCGGCGATCACCGGCGTTGATAACCGTGATTTCGTCGCGGCCATGATTCGTTCCATGCCCGATCTATTGCCGATTCGGAC
TGCTTCCGTTGCCTCTGGGGTGACCACTACTACCCGACCCGCAGGAACGACCTTTACCCTGGCACCTGCGGCCACCGCTG
AGACTGACCCCACCACTGGGATCGCCGCAGCAGATTTACCTAAACTTGGTTTGCTTCAGTTCACGACTTCTTGGACGGTG
CAAGTTGCCCTTGACCAAGCGGCCCAAACCTTCGACGTAAATGTAGTCACCCTTTAG

Upstream 100 bases:

>100_bases
AGTACGTGACACTAACAGGTTCGATTGCTAGAGTTTAGACAACACAAGCTTTCTAGCGTTTTTGGGATGAATCGCTAGGG
ACTATTTGAGGATTTTTTTC

Downstream 100 bases:

>100_bases
GCTTAATCTCCGGTTTTAAAGGGGAATAAATTATTTATTTTGAGGTTTACAAATGGCTAGAAATCGTGAAACTGCAACGT
TAGTATTCGTCACCATGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHTYVSANSADIVGMTSTRAKAS
VSDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIGGFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADP
AAITGVDNRDFVAAMIRSMPDLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTV
QVALDQAAQTFDVNVVTL

Sequences:

>Translated_258_residues
MALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHTYVSANSADIVGMTSTRAKAS
VSDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIGGFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADP
AAITGVDNRDFVAAMIRSMPDLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTV
QVALDQAAQTFDVNVVTL
>Mature_257_residues
ALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHTYVSANSADIVGMTSTRAKASV
SDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIGGFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADPA
AITGVDNRDFVAAMIRSMPDLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTVQ
VALDQAAQTFDVNVVTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26028; Mature: 25897

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHT
CEEEEECCHHCCCCCCCCCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
YVSANSADIVGMTSTRAKASVSDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIG
HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADPAAITGVDNRDFVAAMIRSMP
CHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCEEECCCCCHHHHHHHHHCC
DLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTV
CCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCEEEEECCEEE
QVALDQAAQTFDVNVVTL
EEEECCCCCEEEEEEEEC
>Mature Secondary Structure 
ALTFFESSVSAGASNGVPAGLFLPIADLPGVVAGEFADSETQATKESKAALAIANAIHT
EEEEECCHHCCCCCCCCCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
YVSANSADIVGMTSTRAKASVSDSLDNLTYSFACQYIADLETETVGQIPLPASGANSGIG
HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GFAIDDLFANAAEVAAEGAISGEGVVIPYADLADFGGADPAAITGVDNRDFVAAMIRSMP
CHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCEEECCCCCHHHHHHHHHCC
DLLPIRTASVASGVTTTTRPAGTTFTLAPAATAETDPTTGIAAADLPKLGLLQFTTSWTV
CCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCEEEEECCEEE
QVALDQAAQTFDVNVVTL
EEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA