Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078463

Identifier: 170078463

GI number: 170078463

Start: 1945489

End: 1946334

Strand: Reverse

Name: 170078463

Synonym: SYNPCC7002_A1857

Alternate gene names: NA

Gene position: 1946334-1945489 (Counterclockwise)

Preceding gene: 170078465

Following gene: 170078461

Centisome position: 64.7

GC content: 46.93

Gene sequence:

>846_bases
ATGAGTCCTGTACTGCAATTGGCGATCGCCACCCTGATTTTGGGGACCTCCGGCGTCTTTATCAAACTGGCCGCTTTGTC
TCCCCTCGTGATGACCTTTTTTCGGGCGGGCATTCCCCTAATCTTCGTCTCAGGTTTATTCCTTTACCGTCGGGAACCTC
TTTTTTGGGGCGCAACTCCTTTTTTGTTGCTCATTTCCTTTCTCGATGCCGTGCGGGGATTATGCTACATCATTGGCTTT
AGCTATGCCGACCTCAGCAGTGCCGTCGTGATCCTCTACACCTGGCCCCTATTTACGACCCTATTGAGTTGGATTTTTCT
CAAAGAAACAATTCCCCACCGTAACCTGTGGCTATTACCCTGCTTCATTTTGGGGATCATCGTTATCTACGCTGATGCGG
AAATTAGTCTATCGAGCCGGAGCTTCTTGGGTCTTACCAGCGTTCTCATTGCCGCCGTTTTGGTGGCGTCTACTGTGGTG
ATGTACAAAGTTAAAGCCGCTGATTTTTCGGTATATCGGCTGATTTTTTACCAAAACCTTGTTGCTGGCGTCGTTTCCTT
TCCTTTTCTGCTAGGAACTCAACCTTGGCCCAACCTATTTCAGTTCACCATGGGAGGGATTTACGGTATTTCCATCGGGA
TTATTGGTTTTATGCTGTTTTTTTCTGCCCTTAGTAAACTCAAAGCTTCGACCACAGCCCTCCTCTGTTATCTCGAAATT
TTAAGCACTATTGTCTGTGGCATCGTCTTTTTCCAAGAAGAGCTTTCCGTAAATATTATTCTGGGCGCTTCCCTAATTTT
AGGAGGGAGTTTCTGTTTGAAAAAAACCGGCGATGTTGCCCCCTAG

Upstream 100 bases:

>100_bases
GTTTTTGATCTTGTCAGGGGCTAGCGCTAGGAGTTGTTGGGGGTTACCTTACATAGGTCGGTCTCTGTGGCCTGTTTTCT
ACACTGTCTAAAAACCTTTG

Downstream 100 bases:

>100_bases
GTCAGGACGTCAGCCCCCAACAATTTTTGGTATTTGCGCTGGAGTTCCTGTTGCATCAGGGGATATTGCTCTAGGAGAGG
ATCAATTTTGAGCAATTGTT

Product: integral membrane domain-containing protein

Products: NA

Alternate protein names: Integral Membrane Domain-Containing Protein; Permease Drug/Metabolite Transporter Superfamily; EamA Family Protein; DMT Family Permease

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSPVLQLAIATLILGTSGVFIKLAALSPLVMTFFRAGIPLIFVSGLFLYRREPLFWGATPFLLLISFLDAVRGLCYIIGF
SYADLSSAVVILYTWPLFTTLLSWIFLKETIPHRNLWLLPCFILGIIVIYADAEISLSSRSFLGLTSVLIAAVLVASTVV
MYKVKAADFSVYRLIFYQNLVAGVVSFPFLLGTQPWPNLFQFTMGGIYGISIGIIGFMLFFSALSKLKASTTALLCYLEI
LSTIVCGIVFFQEELSVNIILGASLILGGSFCLKKTGDVAP

Sequences:

>Translated_281_residues
MSPVLQLAIATLILGTSGVFIKLAALSPLVMTFFRAGIPLIFVSGLFLYRREPLFWGATPFLLLISFLDAVRGLCYIIGF
SYADLSSAVVILYTWPLFTTLLSWIFLKETIPHRNLWLLPCFILGIIVIYADAEISLSSRSFLGLTSVLIAAVLVASTVV
MYKVKAADFSVYRLIFYQNLVAGVVSFPFLLGTQPWPNLFQFTMGGIYGISIGIIGFMLFFSALSKLKASTTALLCYLEI
LSTIVCGIVFFQEELSVNIILGASLILGGSFCLKKTGDVAP
>Mature_280_residues
SPVLQLAIATLILGTSGVFIKLAALSPLVMTFFRAGIPLIFVSGLFLYRREPLFWGATPFLLLISFLDAVRGLCYIIGFS
YADLSSAVVILYTWPLFTTLLSWIFLKETIPHRNLWLLPCFILGIIVIYADAEISLSSRSFLGLTSVLIAAVLVASTVVM
YKVKAADFSVYRLIFYQNLVAGVVSFPFLLGTQPWPNLFQFTMGGIYGISIGIIGFMLFFSALSKLKASTTALLCYLEIL
STIVCGIVFFQEELSVNIILGASLILGGSFCLKKTGDVAP

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30751; Mature: 30620

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVLQLAIATLILGTSGVFIKLAALSPLVMTFFRAGIPLIFVSGLFLYRREPLFWGATP
CCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH
FLLLISFLDAVRGLCYIIGFSYADLSSAVVILYTWPLFTTLLSWIFLKETIPHRNLWLLP
HHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHH
CFILGIIVIYADAEISLSSRSFLGLTSVLIAAVLVASTVVMYKVKAADFSVYRLIFYQNL
HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHH
VAGVVSFPFLLGTQPWPNLFQFTMGGIYGISIGIIGFMLFFSALSKLKASTTALLCYLEI
HHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTIVCGIVFFQEELSVNIILGASLILGGSFCLKKTGDVAP
HHHHHHHHHHHHHHCCEEEEEEHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure 
SPVLQLAIATLILGTSGVFIKLAALSPLVMTFFRAGIPLIFVSGLFLYRREPLFWGATP
CHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH
FLLLISFLDAVRGLCYIIGFSYADLSSAVVILYTWPLFTTLLSWIFLKETIPHRNLWLLP
HHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHH
CFILGIIVIYADAEISLSSRSFLGLTSVLIAAVLVASTVVMYKVKAADFSVYRLIFYQNL
HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHH
VAGVVSFPFLLGTQPWPNLFQFTMGGIYGISIGIIGFMLFFSALSKLKASTTALLCYLEI
HHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTIVCGIVFFQEELSVNIILGASLILGGSFCLKKTGDVAP
HHHHHHHHHHHHHHCCEEEEEEHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA