| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078437
Identifier: 170078437
GI number: 170078437
Start: 1919456
End: 1919797
Strand: Reverse
Name: 170078437
Synonym: SYNPCC7002_A1831
Alternate gene names: NA
Gene position: 1919797-1919456 (Counterclockwise)
Preceding gene: 170078438
Following gene: 170078427
Centisome position: 63.82
GC content: 45.03
Gene sequence:
>342_bases GTGAATAACGAAGCCCAAAGTTTTTATGGTCTCACAGGCAACAAACAACAAGGTTCAGACGAGCTTTGGCATTATGTCCA GTCTTTGTCTCCAGAAATGATTGCCCACATGTCAAAGCCCCAATCTCCGGCTGTTAACCAAGTTATCGAACGCAATATTG TTGGGTTATTAGGCGTTTTATCTAGCGCCGATGGATTTAATGTATCGGTCAATATGAGCCGCGAACAGCTTGGTCACTTG TTGGCCTCAGCAATGATGGGGGGCTACTTTATTCGCAATGCCGAGCAACGGTTCAACATCGAAAAATCCCTCCAGGAGCA AGACCTTAATTTGTCCGATTAA
Upstream 100 bases:
>100_bases TGGGTTGTCAATAAGTTGTTACATTAGCCTTAGTTAGTATTGCATCAAAACATAGTGATTCAACGCATCACTCCCATTGA GCATCTAGGAGGAAAGACTG
Downstream 100 bases:
>100_bases AGTCCATTTTCTAGCAATGATCTAGTCAGCAAAATTCAGAAGATTTCAAGGGGAAAAGCTTCCCTTTTTTATTGTCTATT TGTATTGCCTAAGTTCCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MNNEAQSFYGLTGNKQQGSDELWHYVQSLSPEMIAHMSKPQSPAVNQVIERNIVGLLGVLSSADGFNVSVNMSREQLGHL LASAMMGGYFIRNAEQRFNIEKSLQEQDLNLSD
Sequences:
>Translated_113_residues MNNEAQSFYGLTGNKQQGSDELWHYVQSLSPEMIAHMSKPQSPAVNQVIERNIVGLLGVLSSADGFNVSVNMSREQLGHL LASAMMGGYFIRNAEQRFNIEKSLQEQDLNLSD >Mature_113_residues MNNEAQSFYGLTGNKQQGSDELWHYVQSLSPEMIAHMSKPQSPAVNQVIERNIVGLLGVLSSADGFNVSVNMSREQLGHL LASAMMGGYFIRNAEQRFNIEKSLQEQDLNLSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12559; Mature: 12559
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNEAQSFYGLTGNKQQGSDELWHYVQSLSPEMIAHMSKPQSPAVNQVIERNIVGLLGVL CCCCCCHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SSADGFNVSVNMSREQLGHLLASAMMGGYFIRNAEQRFNIEKSLQEQDLNLSD HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHHHHCCCCCCC >Mature Secondary Structure MNNEAQSFYGLTGNKQQGSDELWHYVQSLSPEMIAHMSKPQSPAVNQVIERNIVGLLGVL CCCCCCHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SSADGFNVSVNMSREQLGHLLASAMMGGYFIRNAEQRFNIEKSLQEQDLNLSD HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA