| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is nuoI [C]
Identifier: 170078400
GI number: 170078400
Start: 1880460
End: 1880864
Strand: Reverse
Name: nuoI [C]
Synonym: SYNPCC7002_A1794
Alternate gene names: 170078400
Gene position: 1880864-1880460 (Counterclockwise)
Preceding gene: 170078401
Following gene: 170078399
Centisome position: 62.53
GC content: 48.15
Gene sequence:
>405_bases ATGAAAAAACGAGTGACTCTGACATTTCCCCAGGACACGGTGCAAATGCCCGTCACCTATCGCTTGGCAAAGGATTTTAA TATTGCGGCGAATATCATCCGCGCCCAGGTCGCTCCAAACCAGGTGGGCAAGTTGGTGGTGGAACTCCAGGGGGATATTG ATGCCATTGAGATGGCCTTGGAATGGATGAAAGGCAAGGGGATTTTAGTTTCCCTCGCGAGCAAAGAAATTGTGATTAAC GAAGATATTTGTGTGGATTGTGGTCTCTGTACAGGGGTTTGTCCGACGGGAGCATTATCGCTAGATCCCCAAACGTTTCG ACTAAAATTTACCCGCCAAAAATGTGTGGTTTGCGAACAGTGTTTACCCGCTTGTCCGGTCCAGGCGATCGCCACAAATT TTTAA
Upstream 100 bases:
>100_bases TTTTTTGCCAAACTTGAGCCTTAATCGCGCCAGTCCCCATGGGTGAGAAAGCCGCACTAGAATGATTCTAGAGAAGTGAG ATTCGAGGGGAATTTTTAAG
Downstream 100 bases:
>100_bases GGTACCTTCCCAAAAAAAAGTGCTGTTGGCGGTGATGAAATCAACCCAAAGATTGCAATTGTTAATGAGAGTGATTATAA ATTCTGTTGAAAAATGTATT
Product: iron-sulfur cluster like binding protein
Products: NAD+; ubiquinol [C]
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKKRVTLTFPQDTVQMPVTYRLAKDFNIAANIIRAQVAPNQVGKLVVELQGDIDAIEMALEWMKGKGILVSLASKEIVIN EDICVDCGLCTGVCPTGALSLDPQTFRLKFTRQKCVVCEQCLPACPVQAIATNF
Sequences:
>Translated_134_residues MKKRVTLTFPQDTVQMPVTYRLAKDFNIAANIIRAQVAPNQVGKLVVELQGDIDAIEMALEWMKGKGILVSLASKEIVIN EDICVDCGLCTGVCPTGALSLDPQTFRLKFTRQKCVVCEQCLPACPVQAIATNF >Mature_134_residues MKKRVTLTFPQDTVQMPVTYRLAKDFNIAANIIRAQVAPNQVGKLVVELQGDIDAIEMALEWMKGKGILVSLASKEIVIN EDICVDCGLCTGVCPTGALSLDPQTFRLKFTRQKCVVCEQCLPACPVQAIATNF
Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR018449 [H]
Pfam domain/function: PF00037 Fer4; PF09383 NIL [H]
EC number: 1.6.99.5 [C]
Molecular weight: Translated: 14673; Mature: 14673
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRVTLTFPQDTVQMPVTYRLAKDFNIAANIIRAQVAPNQVGKLVVELQGDIDAIEMAL CCCEEEEECCCCCEECCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH EWMKGKGILVSLASKEIVINEDICVDCGLCTGVCPTGALSLDPQTFRLKFTRQKCVVCEQ HHHCCCCEEEEECCCEEEECCCCEEECCCCCCCCCCCCEEECCCEEEEEECHHHHHHHHH CLPACPVQAIATNF HCCCCCHHHHHCCC >Mature Secondary Structure MKKRVTLTFPQDTVQMPVTYRLAKDFNIAANIIRAQVAPNQVGKLVVELQGDIDAIEMAL CCCEEEEECCCCCEECCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH EWMKGKGILVSLASKEIVINEDICVDCGLCTGVCPTGALSLDPQTFRLKFTRQKCVVCEQ HHHCCCCEEEEECCCEEEECCCCEEECCCCCCCCCCCCEEECCCEEEEEECHHHHHHHHH CLPACPVQAIATNF HCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Iron [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; ubiquinone [C]
Specific reaction: NADH + ubiquinone = NAD+ + ubiquinol [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]