| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078368
Identifier: 170078368
GI number: 170078368
Start: 1848747
End: 1849571
Strand: Reverse
Name: 170078368
Synonym: SYNPCC7002_A1761
Alternate gene names: NA
Gene position: 1849571-1848747 (Counterclockwise)
Preceding gene: 170078369
Following gene: 170078367
Centisome position: 61.49
GC content: 53.7
Gene sequence:
>825_bases ATGAAACGTAGACAGTTTATTCAGACCGCAGGGATTAGTGCTTTTGGGGCGATCGCCGGCTTTTCTCTGCTGCAAAAAAA TACCGTCCAAGCCCAAACCGGCAACCTTGATATTGAATGGCTGGGTCACACCTGTTTTTCCGTCAGTGGTGCGGGGACTA AGGTTCTCATTAATCCCTTCCGTGCCCTCAGTTGTACCGCAGGTTATCGGGACACATTTCCCCAAGCAGACATTGTCCTG TTGAGTAGCCAACTGTTCGACGAAGGCTATACCGATGGTTTACCCGGAGACCCCAGGATTTTGTTCCAAGCCGGACAATA TCCCGTGAATAACATCACCTTTGACGGCATTAGCCTCGCCCATGCCAACATCGAACGCTATCGGGGCTGGCGCTTCCCGC CCAACATTGCCTGGAGCTGGCGCCAGGGAGGCATTAGTCTCTTGCACCTCGGCGGCGCTGGGGAAGAAGTGGACATCGAT GATTTTATTTTGACCGGGGGCAGCCCAGATATTCTGATGATCCCCGTTGGGGGCACCGACGCCGACCCACAGAATATTCC CCCCAAGGGTTACACCCCAGCCCAAGCGCTCCAAGCCCTAGAGTTGCTGCGTCCCAAGATTGTTATCCCGACCCACTATA AAACAACGGCCGGGGACGACACCTGTGGGCTCCAGTCCATTGAATCCTTTTTAAACTTAGTAGACCGTAACGAAATTAAG GTGACCACGGTGGCTTCAAATCGCCTCCAGGTCAATCGAGCGGCCCTTTCCCAAGCCAATTCGGAGATTAAAGTTTTAAG CGATCGCCCCCTGTTGCGGGCCTAG
Upstream 100 bases:
>100_bases TTAACCACGGCAGGTAAACAGCTTTTGCGGAATTTCCTCGCTACTCTGTCGCCTGTACCGCTGCTTGTAACGAATTAGTG AGGGGCTCCCCGACATAACC
Downstream 100 bases:
>100_bases GCGGATCATCATTGTTCCTTTGATTTGATTGAAAAACCTCCAAAATCCTTGGGGGTTTTTTGATCGCGATGGTAAAACCT AGAAAATATTTGCGATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Zn-Dependent Hydrolase Of Beta-Lactamase Fold; Zinc-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Hydrolase; Zn-Dependent Hydrolase Of Beta-Lactamase Fold Protein; Zn-Dependent Hydrolases Of Beta-Lactamase Fold; Hydrolase Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Zn-Dependent Hydrolase; Inactivated Zn-Dependent Hydrolase Of Beta-Lactamase Fold
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKRRQFIQTAGISAFGAIAGFSLLQKNTVQAQTGNLDIEWLGHTCFSVSGAGTKVLINPFRALSCTAGYRDTFPQADIVL LSSQLFDEGYTDGLPGDPRILFQAGQYPVNNITFDGISLAHANIERYRGWRFPPNIAWSWRQGGISLLHLGGAGEEVDID DFILTGGSPDILMIPVGGTDADPQNIPPKGYTPAQALQALELLRPKIVIPTHYKTTAGDDTCGLQSIESFLNLVDRNEIK VTTVASNRLQVNRAALSQANSEIKVLSDRPLLRA
Sequences:
>Translated_274_residues MKRRQFIQTAGISAFGAIAGFSLLQKNTVQAQTGNLDIEWLGHTCFSVSGAGTKVLINPFRALSCTAGYRDTFPQADIVL LSSQLFDEGYTDGLPGDPRILFQAGQYPVNNITFDGISLAHANIERYRGWRFPPNIAWSWRQGGISLLHLGGAGEEVDID DFILTGGSPDILMIPVGGTDADPQNIPPKGYTPAQALQALELLRPKIVIPTHYKTTAGDDTCGLQSIESFLNLVDRNEIK VTTVASNRLQVNRAALSQANSEIKVLSDRPLLRA >Mature_274_residues MKRRQFIQTAGISAFGAIAGFSLLQKNTVQAQTGNLDIEWLGHTCFSVSGAGTKVLINPFRALSCTAGYRDTFPQADIVL LSSQLFDEGYTDGLPGDPRILFQAGQYPVNNITFDGISLAHANIERYRGWRFPPNIAWSWRQGGISLLHLGGAGEEVDID DFILTGGSPDILMIPVGGTDADPQNIPPKGYTPAQALQALELLRPKIVIPTHYKTTAGDDTCGLQSIESFLNLVDRNEIK VTTVASNRLQVNRAALSQANSEIKVLSDRPLLRA
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29752; Mature: 29752
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRQFIQTAGISAFGAIAGFSLLQKNTVQAQTGNLDIEWLGHTCFSVSGAGTKVLINPF CCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEECCEEEEECCCCCEEEECCC RALSCTAGYRDTFPQADIVLLSSQLFDEGYTDGLPGDPRILFQAGQYPVNNITFDGISLA CEEEECCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEECCEEEE HANIERYRGWRFPPNIAWSWRQGGISLLHLGGAGEEVDIDDFILTGGSPDILMIPVGGTD HHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCC ADPQNIPPKGYTPAQALQALELLRPKIVIPTHYKTTAGDDTCGLQSIESFLNLVDRNEIK CCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE VTTVASNRLQVNRAALSQANSEIKVLSDRPLLRA EEEEECCCEEEHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure MKRRQFIQTAGISAFGAIAGFSLLQKNTVQAQTGNLDIEWLGHTCFSVSGAGTKVLINPF CCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEECCEEEEECCCCCEEEECCC RALSCTAGYRDTFPQADIVLLSSQLFDEGYTDGLPGDPRILFQAGQYPVNNITFDGISLA CEEEECCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEECCEEEE HANIERYRGWRFPPNIAWSWRQGGISLLHLGGAGEEVDIDDFILTGGSPDILMIPVGGTD HHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCC ADPQNIPPKGYTPAQALQALELLRPKIVIPTHYKTTAGDDTCGLQSIESFLNLVDRNEIK CCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE VTTVASNRLQVNRAALSQANSEIKVLSDRPLLRA EEEEECCCEEEHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA