| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is speB2 [H]
Identifier: 170078358
GI number: 170078358
Start: 1836661
End: 1837833
Strand: Direct
Name: speB2 [H]
Synonym: SYNPCC7002_A1751
Alternate gene names: 170078358
Gene position: 1836661-1837833 (Clockwise)
Preceding gene: 170078356
Following gene: 170078359
Centisome position: 61.06
GC content: 54.22
Gene sequence:
>1173_bases ATGAGTGAACAACCGAATTTTCGTCCCCCCAGTGAAGCCCAAGCAGCCCTCGAAAAAGAATCTCACCTCCCCCTCACCGG TTGGCAACAGGAAGTAGACCGGGGCCTGGAATACGGCCTCGAAGCCGCCGCCAGTATCAAAGACCGCAGCATTCCCACCT TTTCCCGAGGAGAACTGCCCCACTATGCCGGGATCAATACTTTCCTAAAGGCCCCTTATCTCGAAGATGTCCGCAAGGTT GGTGAATATGACGTGGCCATCCTTGGCGTCCCCCACGACTCTGGCACCACCTATCGCCCCGGCACTCGCTTTGGCCCCCA GGGGATTCGGCGGATCTCGGCTCTCTATACCCCCTACAACTTTGAGATGGGCATTGATCTGCGGGAGCAAATTACCCTTT GTGATGTGGGGGATGTCTTTACGATTCCGGCCAATAACGAAAAATCCTTTGATCAAATTTCTAAAGGGGTCGCCCATGTG TTTAGTTCCGGTGCTTTCCCGATTATTCTCGGCGGCGACCATTCCATTGGCTTTCCCACGGTGCGGGGGGTTTGTCGGCA TTTAGGCGATAAAAAAGTAGGCATTATTCACTTTGACCGCCATGTGGATACCCAGGAAACAGATTTAGACGAGCGGATGC ACACCTGTCCTTGGTTCCATGCCACCAATATGGCCAATGCTCCCGCCAAAAATCTGGTGCAGTTGGGGATTGGCGGTTGG CAGGTGCCCCGGCAAGGGGTCAAGGTTTGTCGAGAACGGGCGACCAATATTCTCACGGTGACTGATATTACCGAAATGGG TATCGATGCGGCGGCGGAGTTTGCCCTGGAGCGTGCCCTAGATGGTACCGATTGTGTTTACATCAGCTTTGACATTGACT GCATTGATGCGGGATTTGTCCCCGGCACAGGTTGGCCAGAACCAGGCGGTTTATTGCCCAGGGAAGCCCTCGCTCTCCTC GGTAAAATCGTCCGGAAGGCCCCCGTCTGTGGTTTGGAAATCGTCGAAGTTTCACCGCCCTACGACATTAGCGATATCAC GTCCCTGATGGCGACCCGCGTGATTTGTGATACCATGGCCCACCTCGTTTTATCTGGTCAGCTACCCCGCAAAGAAAAGC CCGCCTACATTCACCCCGAAGCAAATATGGCAGTGGATCAGGCTTGGACTTAA
Upstream 100 bases:
>100_bases TAAAATGCAAAGCTATCTTGCGTAATTAACCCAAAAACCAAGAATTTGCCTGGTTACTGCTATCGTTAACTAAATTCGTC CCAAAAAAGGCGCGATCACC
Downstream 100 bases:
>100_bases ACTTTGAGGAAGAGTGTTCTGTTTTCTTAGCGGCAAAGCATAATCTTTGTCTGTGTTTTCTAGAGTAATTGTTTGCGATG AAGTATTTGACCCTTGGCAG
Product: arginase/agmatinase family protein
Products: NA
Alternate protein names: Agmatine ureohydrolase 2; AUH 2 [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSEQPNFRPPSEAQAALEKESHLPLTGWQQEVDRGLEYGLEAAASIKDRSIPTFSRGELPHYAGINTFLKAPYLEDVRKV GEYDVAILGVPHDSGTTYRPGTRFGPQGIRRISALYTPYNFEMGIDLREQITLCDVGDVFTIPANNEKSFDQISKGVAHV FSSGAFPIILGGDHSIGFPTVRGVCRHLGDKKVGIIHFDRHVDTQETDLDERMHTCPWFHATNMANAPAKNLVQLGIGGW QVPRQGVKVCRERATNILTVTDITEMGIDAAAEFALERALDGTDCVYISFDIDCIDAGFVPGTGWPEPGGLLPREALALL GKIVRKAPVCGLEIVEVSPPYDISDITSLMATRVICDTMAHLVLSGQLPRKEKPAYIHPEANMAVDQAWT
Sequences:
>Translated_390_residues MSEQPNFRPPSEAQAALEKESHLPLTGWQQEVDRGLEYGLEAAASIKDRSIPTFSRGELPHYAGINTFLKAPYLEDVRKV GEYDVAILGVPHDSGTTYRPGTRFGPQGIRRISALYTPYNFEMGIDLREQITLCDVGDVFTIPANNEKSFDQISKGVAHV FSSGAFPIILGGDHSIGFPTVRGVCRHLGDKKVGIIHFDRHVDTQETDLDERMHTCPWFHATNMANAPAKNLVQLGIGGW QVPRQGVKVCRERATNILTVTDITEMGIDAAAEFALERALDGTDCVYISFDIDCIDAGFVPGTGWPEPGGLLPREALALL GKIVRKAPVCGLEIVEVSPPYDISDITSLMATRVICDTMAHLVLSGQLPRKEKPAYIHPEANMAVDQAWT >Mature_389_residues SEQPNFRPPSEAQAALEKESHLPLTGWQQEVDRGLEYGLEAAASIKDRSIPTFSRGELPHYAGINTFLKAPYLEDVRKVG EYDVAILGVPHDSGTTYRPGTRFGPQGIRRISALYTPYNFEMGIDLREQITLCDVGDVFTIPANNEKSFDQISKGVAHVF SSGAFPIILGGDHSIGFPTVRGVCRHLGDKKVGIIHFDRHVDTQETDLDERMHTCPWFHATNMANAPAKNLVQLGIGGWQ VPRQGVKVCRERATNILTVTDITEMGIDAAAEFALERALDGTDCVYISFDIDCIDAGFVPGTGWPEPGGLLPREALALLG KIVRKAPVCGLEIVEVSPPYDISDITSLMATRVICDTMAHLVLSGQLPRKEKPAYIHPEANMAVDQAWT
Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginase family. Agmatinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI37537722, Length=280, Percent_Identity=32.8571428571429, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI10947139, Length=276, Percent_Identity=25.3623188405797, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI4502215, Length=346, Percent_Identity=22.8323699421965, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1789306, Length=271, Percent_Identity=31.3653136531365, Blast_Score=125, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6325146, Length=214, Percent_Identity=26.6355140186916, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006035 - InterPro: IPR020855 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: =3.5.3.11 [H]
Molecular weight: Translated: 42765; Mature: 42634
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS01053 ARGINASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQPNFRPPSEAQAALEKESHLPLTGWQQEVDRGLEYGLEAAASIKDRSIPTFSRGELP CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC HYAGINTFLKAPYLEDVRKVGEYDVAILGVPHDSGTTYRPGTRFGPQGIRRISALYTPYN CCCCCHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC FEMGIDLREQITLCDVGDVFTIPANNEKSFDQISKGVAHVFSSGAFPIILGGDHSIGFPT EEECCCHHHHEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH VRGVCRHLGDKKVGIIHFDRHVDTQETDLDERMHTCPWFHATNMANAPAKNLVQLGIGGW HHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEECCCCCCCCHHHHHHHCCCCC QVPRQGVKVCRERATNILTVTDITEMGIDAAAEFALERALDGTDCVYISFDIDCIDAGFV CCCHHHHHHHHHHCCCEEEEECHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC PGTGWPEPGGLLPREALALLGKIVRKAPVCGLEIVEVSPPYDISDITSLMATRVICDTMA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH HLVLSGQLPRKEKPAYIHPEANMAVDQAWT HHHHCCCCCCCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure SEQPNFRPPSEAQAALEKESHLPLTGWQQEVDRGLEYGLEAAASIKDRSIPTFSRGELP CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC HYAGINTFLKAPYLEDVRKVGEYDVAILGVPHDSGTTYRPGTRFGPQGIRRISALYTPYN CCCCCHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC FEMGIDLREQITLCDVGDVFTIPANNEKSFDQISKGVAHVFSSGAFPIILGGDHSIGFPT EEECCCHHHHEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH VRGVCRHLGDKKVGIIHFDRHVDTQETDLDERMHTCPWFHATNMANAPAKNLVQLGIGGW HHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEECCCCCCCCHHHHHHHCCCCC QVPRQGVKVCRERATNILTVTDITEMGIDAAAEFALERALDGTDCVYISFDIDCIDAGFV CCCHHHHHHHHHHCCCEEEEECHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC PGTGWPEPGGLLPREALALLGKIVRKAPVCGLEIVEVSPPYDISDITSLMATRVICDTMA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH HLVLSGQLPRKEKPAYIHPEANMAVDQAWT HHHHCCCCCCCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]