Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078338

Identifier: 170078338

GI number: 170078338

Start: 1818527

End: 1819168

Strand: Direct

Name: 170078338

Synonym: SYNPCC7002_A1731

Alternate gene names: NA

Gene position: 1818527-1819168 (Clockwise)

Preceding gene: 170078337

Following gene: 170078343

Centisome position: 60.46

GC content: 42.83

Gene sequence:

>642_bases
ATGGGCCTATACAAAAGAGTCTATAGAATCCAGAGCATCAGTCCTTCTGACCTCGTGCTCAAACAAGGCATTGATAAAAA
CACAGCGATAATCCTTGCCTTCGTGCCAACCCTCGCGATTATTTTATGGCCAATTTCTGATTTTTTGGGCTATCGCTATG
CCGTTTATCTTGTGGGTTTATTTATCTATACTTTTATCTTTTTTCCCTTTTATCTGATGCCCTACGCTCGCTATCTAAAA
GTAGATGCCGATGCGAACCAAATTATTTATTTAGAAGCCTATTTAATTCAACTCTTTAAGCGGGGCCGCCCTTGGTTTCA
ATTCTTGCCCCAACCCAAGGTTTACGCCCTCAAAATTCCCCAACTCAAAGCACTCCACGTTACTCAATATGACACCCTGC
GTTTCTTGGGCAAAGGAGAAAAAATTCTCTTTCCAGATTTTAAATTCGATAATATCTACGAATTAACGCGTACAGTGGTG
CGAATTTTCCCCCTCCTGGAAGCGGAAGTTTGGGTCAACCCTTGGGAAGGGAATTATGGCAATCCCTACACCTACCTCCG
CCGTAAACTAAAAGGGGCAAATATCATGTTTTTAACGGGCAGTTCTGGTTCAGAGCTGTTGGGTGATGATGAGCAACTGT
GA

Upstream 100 bases:

>100_bases
CCTCGATCAAAACTGCGTATGATAAAAGCATCTCCCTTGGCTAGGCCAGGGCCAACTCTTCCACTCTTCCTCGCCAGGCG
CTCACAAAAGATAAATCCCC

Downstream 100 bases:

>100_bases
ACGACGAGCTTTTATTTCCGCAGGTGAGAAGGCAATTCGATGTGGGGAATAATTTCCCGCAAATCATCAAAGGACACCAG
ACCAAAATTCAAAATGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MGLYKRVYRIQSISPSDLVLKQGIDKNTAIILAFVPTLAIILWPISDFLGYRYAVYLVGLFIYTFIFFPFYLMPYARYLK
VDADANQIIYLEAYLIQLFKRGRPWFQFLPQPKVYALKIPQLKALHVTQYDTLRFLGKGEKILFPDFKFDNIYELTRTVV
RIFPLLEAEVWVNPWEGNYGNPYTYLRRKLKGANIMFLTGSSGSELLGDDEQL

Sequences:

>Translated_213_residues
MGLYKRVYRIQSISPSDLVLKQGIDKNTAIILAFVPTLAIILWPISDFLGYRYAVYLVGLFIYTFIFFPFYLMPYARYLK
VDADANQIIYLEAYLIQLFKRGRPWFQFLPQPKVYALKIPQLKALHVTQYDTLRFLGKGEKILFPDFKFDNIYELTRTVV
RIFPLLEAEVWVNPWEGNYGNPYTYLRRKLKGANIMFLTGSSGSELLGDDEQL
>Mature_212_residues
GLYKRVYRIQSISPSDLVLKQGIDKNTAIILAFVPTLAIILWPISDFLGYRYAVYLVGLFIYTFIFFPFYLMPYARYLKV
DADANQIIYLEAYLIQLFKRGRPWFQFLPQPKVYALKIPQLKALHVTQYDTLRFLGKGEKILFPDFKFDNIYELTRTVVR
IFPLLEAEVWVNPWEGNYGNPYTYLRRKLKGANIMFLTGSSGSELLGDDEQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24941; Mature: 24809

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLYKRVYRIQSISPSDLVLKQGIDKNTAIILAFVPTLAIILWPISDFLGYRYAVYLVGL
CCHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIYTFIFFPFYLMPYARYLKVDADANQIIYLEAYLIQLFKRGRPWFQFLPQPKVYALKIP
HHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHCCCHHHHHCCCCCEEEEECC
QLKALHVTQYDTLRFLGKGEKILFPDFKFDNIYELTRTVVRIFPLLEAEVWVNPWEGNYG
CEEEEEECHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
NPYTYLRRKLKGANIMFLTGSSGSELLGDDEQL
CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
GLYKRVYRIQSISPSDLVLKQGIDKNTAIILAFVPTLAIILWPISDFLGYRYAVYLVGL
CHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIYTFIFFPFYLMPYARYLKVDADANQIIYLEAYLIQLFKRGRPWFQFLPQPKVYALKIP
HHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHCCCHHHHHCCCCCEEEEECC
QLKALHVTQYDTLRFLGKGEKILFPDFKFDNIYELTRTVVRIFPLLEAEVWVNPWEGNYG
CEEEEEECHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
NPYTYLRRKLKGANIMFLTGSSGSELLGDDEQL
CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA