Click here to switch to the map view.

The map label for this gene is 170078317

Identifier: 170078317

GI number: 170078317

Start: 1795483

End: 1796727

Strand: Direct

Name: 170078317

Synonym: SYNPCC7002_A1710

Alternate gene names: NA

Gene position: 1795483-1796727 (Clockwise)

Preceding gene: 170078315

Following gene: 170078320

Centisome position: 59.69

GC content: 51.89

Gene sequence:

>1245_bases
ATGAAAAAAATTGCCTATCTCGAATGCCCGACGGGGATTGCAGGAGATATGTGTCTCGGTGCATTGATAGATGGGGGCGT
ACCGCTGGAATATCTCAAAAATCAGCTAAATCGCTTGGGAATCGCCGCTGAATACGATCTTCGGGCGGAAACGGTGATTC
GTCAAGGACAGCGGGCGACAAAGGTCTTTGTGGATCTCAAAACTAAAGCAACTCACCATGACCATGATCATTCCCAGGAT
CAGACTCATCACCATCATGCTGACCATGCACCCCACCGCCATCTGCCAGAAATTCAGGCCATGATTAAAGGGGCAGGTTT
ACCAGAGCGGGTCGAACGTTGGAGTTTGGCAATTTTTCAGAATTTGGCGATCGCCGAAGCAACGGTTCACGGTACAACCC
CAGAGCAAGTACATTTCCACGAAGTTGGTGCGACCGATGCCCTGGTAGATATTGTGGGGACTTGTTTAGGACTAGATTGG
TTAGAAATTGATGAATTATATTGTGCGCCGATGCCCACTGGTGGCGGCACGGTGAAAGCAGCCCACGGAATTTTGCCTGT
CCCGGTACCAGCGGTGCTCCAACTCTGGCAACAACGCCAGGTTCCGGTTTATAGCAATGGCATCGAAAAAGAATTAGTTA
CTCCCACTGGCGCGGCGATCGCCACCACTTTAGCAACGGACTTTTGTCAGCCACCCGCCATGACCCTCGCAAAAATTGCC
CTAGGTTCCGGCACCATTGATTTACCCTTGCCGAATTTATTGCGGCTCTGGATCGGCCACCAGCCAGAAACGCCCCACTT
GGAAACCATAGTTACCCTCGAAACCCAAATTGATGATCTCAATCCCCAGGCGATCGCCTATGCCTGCGAAAAATTACAAG
CGGCCGGGGCGTTAGACGTTTTCACCCAGGGGATCACGATGAAAAAAAATCGCTTGGGTACTCTCCTAACGGTGATTTGT
CCCGTGGCATTGGTCGAGATTTGCGAAGAAATTCTATTCACCGAAACCAGCACCCTCGGCATCCGTCGCCACACCCAAAC
CCGGTCAATTCTCCAGCGGCGCTTTGAAACCGTTGCCACCCCTGCTGGAGAGATTCAACTGAAAATCGGCTACCGGGGCG
ACAAAATCTACAACGTCCAACCGGAATACGAAGACGTTAAGGCGATCGCCCAACAAACTGGACAATCCTGGCAGGCGATC
GCCCAACAAGCCCTTTGCCAATTCCCCAGGGATGCCGAGTCTTGA

Upstream 100 bases:

>100_bases
CACGGCCCCAGCCCGGAGTTGTTGGGCGATCGCCTCTAAATCCCGTTGTTGGGGATTTTTCGGGTGGAGTGAATAATAAT
TAGCCATTGTTTTTGCCGCT

Downstream 100 bases:

>100_bases
CCCCTCAAAAAATCCAGCACCGTCGTCCCCTATGCCTTACGAATATTCAAAAAACGCTGGTATTTCTGATAGAGGGGTAA
ACCGGGGAAATCCTGCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKKIAYLECPTGIAGDMCLGALIDGGVPLEYLKNQLNRLGIAAEYDLRAETVIRQGQRATKVFVDLKTKATHHDHDHSQD
QTHHHHADHAPHRHLPEIQAMIKGAGLPERVERWSLAIFQNLAIAEATVHGTTPEQVHFHEVGATDALVDIVGTCLGLDW
LEIDELYCAPMPTGGGTVKAAHGILPVPVPAVLQLWQQRQVPVYSNGIEKELVTPTGAAIATTLATDFCQPPAMTLAKIA
LGSGTIDLPLPNLLRLWIGHQPETPHLETIVTLETQIDDLNPQAIAYACEKLQAAGALDVFTQGITMKKNRLGTLLTVIC
PVALVEICEEILFTETSTLGIRRHTQTRSILQRRFETVATPAGEIQLKIGYRGDKIYNVQPEYEDVKAIAQQTGQSWQAI
AQQALCQFPRDAES

Sequences:

>Translated_414_residues
MKKIAYLECPTGIAGDMCLGALIDGGVPLEYLKNQLNRLGIAAEYDLRAETVIRQGQRATKVFVDLKTKATHHDHDHSQD
QTHHHHADHAPHRHLPEIQAMIKGAGLPERVERWSLAIFQNLAIAEATVHGTTPEQVHFHEVGATDALVDIVGTCLGLDW
LEIDELYCAPMPTGGGTVKAAHGILPVPVPAVLQLWQQRQVPVYSNGIEKELVTPTGAAIATTLATDFCQPPAMTLAKIA
LGSGTIDLPLPNLLRLWIGHQPETPHLETIVTLETQIDDLNPQAIAYACEKLQAAGALDVFTQGITMKKNRLGTLLTVIC
PVALVEICEEILFTETSTLGIRRHTQTRSILQRRFETVATPAGEIQLKIGYRGDKIYNVQPEYEDVKAIAQQTGQSWQAI
AQQALCQFPRDAES
>Mature_414_residues
MKKIAYLECPTGIAGDMCLGALIDGGVPLEYLKNQLNRLGIAAEYDLRAETVIRQGQRATKVFVDLKTKATHHDHDHSQD
QTHHHHADHAPHRHLPEIQAMIKGAGLPERVERWSLAIFQNLAIAEATVHGTTPEQVHFHEVGATDALVDIVGTCLGLDW
LEIDELYCAPMPTGGGTVKAAHGILPVPVPAVLQLWQQRQVPVYSNGIEKELVTPTGAAIATTLATDFCQPPAMTLAKIA
LGSGTIDLPLPNLLRLWIGHQPETPHLETIVTLETQIDDLNPQAIAYACEKLQAAGALDVFTQGITMKKNRLGTLLTVIC
PVALVEICEEILFTETSTLGIRRHTQTRSILQRRFETVATPAGEIQLKIGYRGDKIYNVQPEYEDVKAIAQQTGQSWQAI
AQQALCQFPRDAES

Specific function: Unknown

COG id: COG1641

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0272 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1710_SYNP2 (B1XPA6)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734955.1
- ProteinModelPortal:   B1XPA6
- SMR:   B1XPA6
- GeneID:   6057191
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1710
- HOGENOM:   HBG733311
- OMA:   IVGTCLG
- ProtClustDB:   PRK04194
- HAMAP:   MF_01074
- InterPro:   IPR002822
- TIGRFAMs:   TIGR00299

Pfam domain/function: PF01969 DUF111

EC number: NA

Molecular weight: Translated: 45374; Mature: 45374

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAYLECPTGIAGDMCLGALIDGGVPLEYLKNQLNRLGIAAEYDLRAETVIRQGQRAT
CCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCE
KVFVDLKTKATHHDHDHSQDQTHHHHADHAPHRHLPEIQAMIKGAGLPERVERWSLAIFQ
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
NLAIAEATVHGTTPEQVHFHEVGATDALVDIVGTCLGLDWLEIDELYCAPMPTGGGTVKA
HHHHHHEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCEEC
AHGILPVPVPAVLQLWQQRQVPVYSNGIEKELVTPTGAAIATTLATDFCQPPAMTLAKIA
CCCCCCCCHHHHHHHHHHCCCCHHCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LGSGTIDLPLPNLLRLWIGHQPETPHLETIVTLETQIDDLNPQAIAYACEKLQAAGALDV
HCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHCCHHHH
FTQGITMKKNRLGTLLTVICPVALVEICEEILFTETSTLGIRRHTQTRSILQRRFETVAT
HHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PAGEIQLKIGYRGDKIYNVQPEYEDVKAIAQQTGQSWQAIAQQALCQFPRDAES
CCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKIAYLECPTGIAGDMCLGALIDGGVPLEYLKNQLNRLGIAAEYDLRAETVIRQGQRAT
CCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCE
KVFVDLKTKATHHDHDHSQDQTHHHHADHAPHRHLPEIQAMIKGAGLPERVERWSLAIFQ
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
NLAIAEATVHGTTPEQVHFHEVGATDALVDIVGTCLGLDWLEIDELYCAPMPTGGGTVKA
HHHHHHEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCEEC
AHGILPVPVPAVLQLWQQRQVPVYSNGIEKELVTPTGAAIATTLATDFCQPPAMTLAKIA
CCCCCCCCHHHHHHHHHHCCCCHHCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LGSGTIDLPLPNLLRLWIGHQPETPHLETIVTLETQIDDLNPQAIAYACEKLQAAGALDV
HCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHCCHHHH
FTQGITMKKNRLGTLLTVICPVALVEICEEILFTETSTLGIRRHTQTRSILQRRFETVAT
HHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PAGEIQLKIGYRGDKIYNVQPEYEDVKAIAQQTGQSWQAIAQQALCQFPRDAES
CCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA