| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078312
Identifier: 170078312
GI number: 170078312
Start: 1790253
End: 1791401
Strand: Direct
Name: 170078312
Synonym: SYNPCC7002_A1705
Alternate gene names: NA
Gene position: 1790253-1791401 (Clockwise)
Preceding gene: 170078309
Following gene: 170078313
Centisome position: 59.52
GC content: 51.26
Gene sequence:
>1149_bases ATGGCGGGTTGGTTAAAAAAGCTATTTTCTCCCTCTCAGGGTCGGGGCCAAATACCCACCGTAGACCTTCCCCCCCTCAC CGACGCAGATTTTGAATTTTTATTGGCGCAGCTCCTCCAGGGTATCTCTCGCGGGTGGCAGCCTGACCGCCTAGAAGTAT TTATCGCTGATTTGGGGATTCGCGGCAAAGTCACCGCCTGGGAAGCATGGCTAGAACGCTACAGTACACAAATACTAGCA CAGGCACAACCCCCCCAACAACAACAAATTGGCACACGATTGCTCTACATCAGTAATGCCTTTAAAAATTCGCCGAAGTT ACAACGTTTCGCCCGTGCTTTCGGGGATACAGGACAACAATTAGTCACGGGACGCGGGAAAATTACCATTGAAATTTGGG AGTACGATGGTGCCGATCAACTCGCTGAGTTAGAAACAACCCCAGAAAATACCCCAGTACCAGAATATTCCCAAGAAGCA TCCCCAGAAACAGTAGAACCGGTCGTCACCCCCGAAGTGGAAACGGCGGCGGAACCCCTGTCTGAAATGCCGGAAACGAT CAATCCAGAGGAACCAGAAACGCCGATCCAAGAGATGCCAGAGGAAACTACCCAAGAAATCACGGAAACCACAACTGAGG GCACTCCCCAAACCATTGAATCGTTGTTTCAGGCTGGTCTGACAAAGGCCGATCAAGGAGACTTTGTTGGGGCGATCGCT GACTGGGATCAAGTGATTGAAATCAATCCAACAATTTCTGCAGTGTGGCATAACCGGGGCAGTGCCCTTGGTCGCCTCAA GCAATATGACCAAGCCCTCGAATCCCTCAAACAAGCAATTCTGTTAGCCCCCGATAACGTTCTCATTTGGCGCGATCACA GTTATGTGCTCATGGCCCTTGAACAATGGCAGGCAGCCCTCAAAAGCTGGAATACCACCATCGAATTGCAAGAAGACCTC ACCGAAGCTTGGTACCAGCGGGGCCTCACCCTAGAACAACTCAACAAACTAGAAAACGCCCAAATCAACTACCGTCGCGT TTTGCATCTTGTGCCGGATTTTGTCCAGGCCCGAGAGCGTTTAGAGGCCATCGAAGCAGTGCTCAATGCCCCGTCCTCAC CGCTACCGACAGATCCTTGGGCTGAATAA
Upstream 100 bases:
>100_bases GAATCGATATCTAACGTCCAATGTCTAATATCTGGGGGTTAACAACATAAAATGGGTGAGTACAAGAACGACCAGAGCAA GTAAAAGGATTATTAAGGAT
Downstream 100 bases:
>100_bases TTAAGCGCGGCCACTGCTCTGTCCCCATCTCCATTGTTCTTTTTCTCGCATTTCATGGCACAACAACGCACAATTGACCG CATTTATACCGACGGTGGCT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat-Containing Protein; Serine/Threonine Protein Kinase; TPR Repeat-Containing Serine/Threonin Protein Kinase; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Protein; TPR Repeat-Containing ; Serine/Threonine Protein Kinase With TPR Repeats; Serine/Threonine Kinase; Protein Prenyltransferase Subunit Alpha; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeat-Containing Protein Kinase; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MAGWLKKLFSPSQGRGQIPTVDLPPLTDADFEFLLAQLLQGISRGWQPDRLEVFIADLGIRGKVTAWEAWLERYSTQILA QAQPPQQQQIGTRLLYISNAFKNSPKLQRFARAFGDTGQQLVTGRGKITIEIWEYDGADQLAELETTPENTPVPEYSQEA SPETVEPVVTPEVETAAEPLSEMPETINPEEPETPIQEMPEETTQEITETTTEGTPQTIESLFQAGLTKADQGDFVGAIA DWDQVIEINPTISAVWHNRGSALGRLKQYDQALESLKQAILLAPDNVLIWRDHSYVLMALEQWQAALKSWNTTIELQEDL TEAWYQRGLTLEQLNKLENAQINYRRVLHLVPDFVQARERLEAIEAVLNAPSSPLPTDPWAE
Sequences:
>Translated_382_residues MAGWLKKLFSPSQGRGQIPTVDLPPLTDADFEFLLAQLLQGISRGWQPDRLEVFIADLGIRGKVTAWEAWLERYSTQILA QAQPPQQQQIGTRLLYISNAFKNSPKLQRFARAFGDTGQQLVTGRGKITIEIWEYDGADQLAELETTPENTPVPEYSQEA SPETVEPVVTPEVETAAEPLSEMPETINPEEPETPIQEMPEETTQEITETTTEGTPQTIESLFQAGLTKADQGDFVGAIA DWDQVIEINPTISAVWHNRGSALGRLKQYDQALESLKQAILLAPDNVLIWRDHSYVLMALEQWQAALKSWNTTIELQEDL TEAWYQRGLTLEQLNKLENAQINYRRVLHLVPDFVQARERLEAIEAVLNAPSSPLPTDPWAE >Mature_381_residues AGWLKKLFSPSQGRGQIPTVDLPPLTDADFEFLLAQLLQGISRGWQPDRLEVFIADLGIRGKVTAWEAWLERYSTQILAQ AQPPQQQQIGTRLLYISNAFKNSPKLQRFARAFGDTGQQLVTGRGKITIEIWEYDGADQLAELETTPENTPVPEYSQEAS PETVEPVVTPEVETAAEPLSEMPETINPEEPETPIQEMPEETTQEITETTTEGTPQTIESLFQAGLTKADQGDFVGAIAD WDQVIEINPTISAVWHNRGSALGRLKQYDQALESLKQAILLAPDNVLIWRDHSYVLMALEQWQAALKSWNTTIELQEDLT EAWYQRGLTLEQLNKLENAQINYRRVLHLVPDFVQARERLEAIEAVLNAPSSPLPTDPWAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42968; Mature: 42836
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGWLKKLFSPSQGRGQIPTVDLPPLTDADFEFLLAQLLQGISRGWQPDRLEVFIADLGI CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC RGKVTAWEAWLERYSTQILAQAQPPQQQQIGTRLLYISNAFKNSPKLQRFARAFGDTGQQ CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEEHHHCCCHHHHHHHHHHCCCCHH LVTGRGKITIEIWEYDGADQLAELETTPENTPVPEYSQEASPETVEPVVTPEVETAAEPL HHCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SEMPETINPEEPETPIQEMPEETTQEITETTTEGTPQTIESLFQAGLTKADQGDFVGAIA HHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEHH DWDQVIEINPTISAVWHNRGSALGRLKQYDQALESLKQAILLAPDNVLIWRDHSYVLMAL CCCCEEEECCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHH EQWQAALKSWNTTIELQEDLTEAWYQRGLTLEQLNKLENAQINYRRVLHLVPDFVQARER HHHHHHHHHCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LEAIEAVLNAPSSPLPTDPWAE HHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AGWLKKLFSPSQGRGQIPTVDLPPLTDADFEFLLAQLLQGISRGWQPDRLEVFIADLGI CHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC RGKVTAWEAWLERYSTQILAQAQPPQQQQIGTRLLYISNAFKNSPKLQRFARAFGDTGQQ CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEEHHHCCCHHHHHHHHHHCCCCHH LVTGRGKITIEIWEYDGADQLAELETTPENTPVPEYSQEASPETVEPVVTPEVETAAEPL HHCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SEMPETINPEEPETPIQEMPEETTQEITETTTEGTPQTIESLFQAGLTKADQGDFVGAIA HHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEHH DWDQVIEINPTISAVWHNRGSALGRLKQYDQALESLKQAILLAPDNVLIWRDHSYVLMAL CCCCEEEECCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHH EQWQAALKSWNTTIELQEDLTEAWYQRGLTLEQLNKLENAQINYRRVLHLVPDFVQARER HHHHHHHHHCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LEAIEAVLNAPSSPLPTDPWAE HHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA