| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078269
Identifier: 170078269
GI number: 170078269
Start: 1744536
End: 1744868
Strand: Reverse
Name: 170078269
Synonym: SYNPCC7002_A1661
Alternate gene names: NA
Gene position: 1744868-1744536 (Counterclockwise)
Preceding gene: 170078273
Following gene: 170078264
Centisome position: 58.01
GC content: 50.75
Gene sequence:
>333_bases ATGGCACTTTCCCACACTGAATTTGAGCAGGCGATCGCCCAAGTGGAAGCTGACCTTGCCGCCCTAAAAGACCGTCACGC CCAGGTCAAGACTGCCGAAGCCCGCATCGCAGAGCTGAAAGCAGAACAAGAGAATCTCCAGGCAGAGCCAGAAACGATCC AAAAACAAGCCTCCCTCAAAACAGAACTCAACCTCATTGCCGCCGAAATCGCGAAGTTAGAACTGCAACTCGAAAGTCAG TTGCTCAAGTGGCAGGAACCCTTTTGGCAAGTTGTTCGCTTCACAGGGGTAGGCATTTTATTGGGCTGGATTCTTAAATC GTTTACGGTTTAG
Upstream 100 bases:
>100_bases AATTGGTAGACGCGCTAGATTTAGGTTCTAGTGTCCTAGACGTGAGAGTTCGAGTCTCTCCGTCCGCATTTACAAAAAAA AGTTCCTGGGGTTTGGAGTG
Downstream 100 bases:
>100_bases AGTTTAAATCTCCTTGTGGTCGCCCTGGATAAAGCGGACGCACCAACACCGGCGCATAAAAATCGTCCTGGGAAAGCACC ACCTTTGATTGAGCCGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MALSHTEFEQAIAQVEADLAALKDRHAQVKTAEARIAELKAEQENLQAEPETIQKQASLKTELNLIAAEIAKLELQLESQ LLKWQEPFWQVVRFTGVGILLGWILKSFTV
Sequences:
>Translated_110_residues MALSHTEFEQAIAQVEADLAALKDRHAQVKTAEARIAELKAEQENLQAEPETIQKQASLKTELNLIAAEIAKLELQLESQ LLKWQEPFWQVVRFTGVGILLGWILKSFTV >Mature_109_residues ALSHTEFEQAIAQVEADLAALKDRHAQVKTAEARIAELKAEQENLQAEPETIQKQASLKTELNLIAAEIAKLELQLESQL LKWQEPFWQVVRFTGVGILLGWILKSFTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12395; Mature: 12264
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSHTEFEQAIAQVEADLAALKDRHAQVKTAEARIAELKAEQENLQAEPETIQKQASLK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TELNLIAAEIAKLELQLESQLLKWQEPFWQVVRFTGVGILLGWILKSFTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALSHTEFEQAIAQVEADLAALKDRHAQVKTAEARIAELKAEQENLQAEPETIQKQASLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TELNLIAAEIAKLELQLESQLLKWQEPFWQVVRFTGVGILLGWILKSFTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA