Click here to switch to the map view.

The map label for this gene is ubiB [C]

Identifier: 170078253

GI number: 170078253

Start: 1724611

End: 1726239

Strand: Direct

Name: ubiB [C]

Synonym: SYNPCC7002_A1645

Alternate gene names: 170078253

Gene position: 1724611-1726239 (Clockwise)

Preceding gene: 170078252

Following gene: 170078254

Centisome position: 57.33

GC content: 48.56

Gene sequence:

>1629_bases
ATGGTTTTTTCTCTGACCCAGAGCAGTTCACGCCAGCGGGAAATTATTGAAATTGTTTTCAGTAATGGTTGGGACTTCAT
GAAGAGTCTCCTGACTGGTGGTAAAGCCGATAAACCACAGATCCCCCCCCCTGAAGTTTTTCGCAATATTCTGGTGGAGC
TAGGGCCTTTTTATGTCAAGCTCGGACAGCTTCTGAGCACTAGGCCCGATCTTCTACCCCCGAAATACATTGAGGCCCTC
ACTGCTCTCCAAGCCAAAGTCCCCACGGTGCCTTGGTTTGAAATTGAGCAAACCATTCGTCAGCAACTTTCCCAACCCCT
CGAAGACGTTTTTCAAGAAATTAATCCCAACCCCATTGCAGCGGGTTCCATTGCCCAAATCCATCGGGCGGTTCTGCGGA
ATGGTCAAGCTGTCGCCTTGAAGGTACAACGGCCAGGCATCGATCAAATCGTCGCCCAGGACATTGCCCTCATCAAAGGG
ATTGCAGAACTCGCTGCTCTCACAGAATTTGGCCAAGATTATGATGTAATTGCCCTCGCGAAAGAGTTTACAAAAGCTGT
CCAGGCGGAGCTCGATTTTCGTACTGAAGCAGGTTATACCGATCAGCTCCGGCGCAATTTAGCGAAAAGCAGTTGGTTTG
ATCAACAAAAACTGACGATTCCAGAAATTTATTGGGAGCTGACCACCGAAAAGCTGCTGGTTATGGAATGGCTCGATGGC
AAGCCCTTGCTGGAAGCGGAGGTCACTTCAGAAAAACAACGTCAAGCAATCACGACAATTTTGTTTCGGGCTTTTTTCCA
GCAAATTTTTGTGGATGGTTTTTTCCATGCTGATCCTCACCCCGGTAATATTTTCTACCTCGATAGTCAGACGGTGGCGT
TAATTGATTGTGGGATGATTGGCCGCCTCGATCCGCGCACCCAAAAACTACTGACAGAGATGCTACTGGCCATTGTGGAT
ATGGATGCCCAGAGCTGTGCCCAGTTGACCCTAGAACTATCCGAAGGGGCGCACACGACGAACTTAGCCCGCCTAGAAGC
CAACTATGATCGCCTGCTGCGTAAATATTACGACCGGAGCTTAACGCAGTTAAATTTTAGTGAGGTGTTCTATGAAATTT
TGCAGGTAGCCCGCAACAATAAGGTTAAACTGCCGGGAAATTTGGGTTTGTATGCCAAAAGTCTCGCCAATTTGGAGGGG
GTCGCCCGCAGTTTTAATCCAGAGGTTAATTTACTCGATGAGATTAAGCCGCTGATCACTGATATTTTCCGACGGCAATT
GGTGGGGGATACTCCATTTCAGACCATGTTCCGCACGGTCCTCGATCTGAAAACGATTTCTTTGCGATCGCCGCGCCAGA
TTGACGTGATTCTCGACCGCCTCAGCTCAGAAACCCTCCAGTGGAATTTAAACCTGCGGGAACTCGATGGCCTGCGCCGT
AGCATTGACGACTCCGCTAATCGCCTATCCTTCAGTATTGTGGTGGGGTCGTTAATCATGGGAGCCGCGATCATTACCAT
TTCGCCGAACCGTCAGTTAATGATTGTGAATGAAATTTTGTTTGCGGCAGCCAGTCTTTTAGGATTGTGGCTAATCATTA
GTATTTTGCGGTCAGGACGCCTAAAGTAA

Upstream 100 bases:

>100_bases
TAGGCATTTTTGGGGACAAATGAATAACTTGATGGAGGCGCTTCCCTCTAAAAAAACTAACGTATAGTAGAGACCAAGCT
AATTCTACATCGGGTGTTCC

Downstream 100 bases:

>100_bases
ATATCCCCTGGGTGATGAAATCTAAAAAATTGCCCCAGGCAGAACAACCAAAGGATACTATAGAAAATGGCCTTGACCTT
TGGCATGAATTATCGCTCTG

Product: protein kinase AarF

Products: 2-octaprenyl-6-hydroxyphenol [C]

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MVFSLTQSSSRQREIIEIVFSNGWDFMKSLLTGGKADKPQIPPPEVFRNILVELGPFYVKLGQLLSTRPDLLPPKYIEAL
TALQAKVPTVPWFEIEQTIRQQLSQPLEDVFQEINPNPIAAGSIAQIHRAVLRNGQAVALKVQRPGIDQIVAQDIALIKG
IAELAALTEFGQDYDVIALAKEFTKAVQAELDFRTEAGYTDQLRRNLAKSSWFDQQKLTIPEIYWELTTEKLLVMEWLDG
KPLLEAEVTSEKQRQAITTILFRAFFQQIFVDGFFHADPHPGNIFYLDSQTVALIDCGMIGRLDPRTQKLLTEMLLAIVD
MDAQSCAQLTLELSEGAHTTNLARLEANYDRLLRKYYDRSLTQLNFSEVFYEILQVARNNKVKLPGNLGLYAKSLANLEG
VARSFNPEVNLLDEIKPLITDIFRRQLVGDTPFQTMFRTVLDLKTISLRSPRQIDVILDRLSSETLQWNLNLRELDGLRR
SIDDSANRLSFSIVVGSLIMGAAIITISPNRQLMIVNEILFAAASLLGLWLIISILRSGRLK

Sequences:

>Translated_542_residues
MVFSLTQSSSRQREIIEIVFSNGWDFMKSLLTGGKADKPQIPPPEVFRNILVELGPFYVKLGQLLSTRPDLLPPKYIEAL
TALQAKVPTVPWFEIEQTIRQQLSQPLEDVFQEINPNPIAAGSIAQIHRAVLRNGQAVALKVQRPGIDQIVAQDIALIKG
IAELAALTEFGQDYDVIALAKEFTKAVQAELDFRTEAGYTDQLRRNLAKSSWFDQQKLTIPEIYWELTTEKLLVMEWLDG
KPLLEAEVTSEKQRQAITTILFRAFFQQIFVDGFFHADPHPGNIFYLDSQTVALIDCGMIGRLDPRTQKLLTEMLLAIVD
MDAQSCAQLTLELSEGAHTTNLARLEANYDRLLRKYYDRSLTQLNFSEVFYEILQVARNNKVKLPGNLGLYAKSLANLEG
VARSFNPEVNLLDEIKPLITDIFRRQLVGDTPFQTMFRTVLDLKTISLRSPRQIDVILDRLSSETLQWNLNLRELDGLRR
SIDDSANRLSFSIVVGSLIMGAAIITISPNRQLMIVNEILFAAASLLGLWLIISILRSGRLK
>Mature_542_residues
MVFSLTQSSSRQREIIEIVFSNGWDFMKSLLTGGKADKPQIPPPEVFRNILVELGPFYVKLGQLLSTRPDLLPPKYIEAL
TALQAKVPTVPWFEIEQTIRQQLSQPLEDVFQEINPNPIAAGSIAQIHRAVLRNGQAVALKVQRPGIDQIVAQDIALIKG
IAELAALTEFGQDYDVIALAKEFTKAVQAELDFRTEAGYTDQLRRNLAKSSWFDQQKLTIPEIYWELTTEKLLVMEWLDG
KPLLEAEVTSEKQRQAITTILFRAFFQQIFVDGFFHADPHPGNIFYLDSQTVALIDCGMIGRLDPRTQKLLTEMLLAIVD
MDAQSCAQLTLELSEGAHTTNLARLEANYDRLLRKYYDRSLTQLNFSEVFYEILQVARNNKVKLPGNLGLYAKSLANLEG
VARSFNPEVNLLDEIKPLITDIFRRQLVGDTPFQTMFRTVLDLKTISLRSPRQIDVILDRLSSETLQWNLNLRELDGLRR
SIDDSANRLSFSIVVGSLIMGAAIITISPNRQLMIVNEILFAAASLLGLWLIISILRSGRLK

Specific function: Required, Probably Indirectly, For The Hydroxylation Of 2-Octaprenylphenol To 2-Octaprenyl-6-Hydroxy-Phenol, The Fourth Step In Ubiquinone Biosynthesis. Specific For Aerobically Grown Log-Phase Cells. [C]

COG id: COG0661

COG function: function code R; Predicted unusual protein kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein kinase superfamily. ADCK protein kinase family [H]

Homologues:

Organism=Homo sapiens, GI40254938, Length=230, Percent_Identity=33.0434782608696, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI41393593, Length=277, Percent_Identity=28.8808664259928, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI217035081, Length=186, Percent_Identity=32.7956989247312, Blast_Score=113, Evalue=5e-25,
Organism=Homo sapiens, GI34147522, Length=279, Percent_Identity=26.1648745519713, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI27363457, Length=281, Percent_Identity=25.9786476868327, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI217416386, Length=249, Percent_Identity=26.9076305220884, Blast_Score=86, Evalue=7e-17,
Organism=Escherichia coli, GI2367309, Length=393, Percent_Identity=31.8066157760814, Blast_Score=185, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI17559152, Length=290, Percent_Identity=26.551724137931, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17555620, Length=469, Percent_Identity=21.7484008528785, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI32565180, Length=229, Percent_Identity=25.3275109170306, Blast_Score=88, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323282, Length=283, Percent_Identity=29.3286219081272, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6321319, Length=243, Percent_Identity=25.1028806584362, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6325148, Length=441, Percent_Identity=19.9546485260771, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI22024280, Length=324, Percent_Identity=26.8518518518519, Blast_Score=138, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24662575, Length=273, Percent_Identity=30.03663003663, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI18859849, Length=242, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004147
- InterPro:   IPR011009
- InterPro:   IPR000719 [H]

Pfam domain/function: PF03109 ABC1 [H]

EC number: NA

Molecular weight: Translated: 61228; Mature: 61228

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSLTQSSSRQREIIEIVFSNGWDFMKSLLTGGKADKPQIPPPEVFRNILVELGPFYVK
CEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGQLLSTRPDLLPPKYIEALTALQAKVPTVPWFEIEQTIRQQLSQPLEDVFQEINPNPIA
HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AGSIAQIHRAVLRNGQAVALKVQRPGIDQIVAQDIALIKGIAELAALTEFGQDYDVIALA
CCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KEFTKAVQAELDFRTEAGYTDQLRRNLAKSSWFDQQKLTIPEIYWELTTEKLLVMEWLDG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCC
KPLLEAEVTSEKQRQAITTILFRAFFQQIFVDGFFHADPHPGNIFYLDSQTVALIDCGMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCC
GRLDPRTQKLLTEMLLAIVDMDAQSCAQLTLELSEGAHTTNLARLEANYDRLLRKYYDRS
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHH
LTQLNFSEVFYEILQVARNNKVKLPGNLGLYAKSLANLEGVARSFNPEVNLLDEIKPLIT
HHHCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DIFRRQLVGDTPFQTMFRTVLDLKTISLRSPRQIDVILDRLSSETLQWNLNLRELDGLRR
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH
SIDDSANRLSFSIVVGSLIMGAAIITISPNRQLMIVNEILFAAASLLGLWLIISILRSGR
HHCCHHHHEEHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
LK
CC
>Mature Secondary Structure
MVFSLTQSSSRQREIIEIVFSNGWDFMKSLLTGGKADKPQIPPPEVFRNILVELGPFYVK
CEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGQLLSTRPDLLPPKYIEALTALQAKVPTVPWFEIEQTIRQQLSQPLEDVFQEINPNPIA
HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AGSIAQIHRAVLRNGQAVALKVQRPGIDQIVAQDIALIKGIAELAALTEFGQDYDVIALA
CCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KEFTKAVQAELDFRTEAGYTDQLRRNLAKSSWFDQQKLTIPEIYWELTTEKLLVMEWLDG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCC
KPLLEAEVTSEKQRQAITTILFRAFFQQIFVDGFFHADPHPGNIFYLDSQTVALIDCGMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCC
GRLDPRTQKLLTEMLLAIVDMDAQSCAQLTLELSEGAHTTNLARLEANYDRLLRKYYDRS
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHH
LTQLNFSEVFYEILQVARNNKVKLPGNLGLYAKSLANLEGVARSFNPEVNLLDEIKPLIT
HHHCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DIFRRQLVGDTPFQTMFRTVLDLKTISLRSPRQIDVILDRLSSETLQWNLNLRELDGLRR
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH
SIDDSANRLSFSIVVGSLIMGAAIITISPNRQLMIVNEILFAAASLLGLWLIISILRSGR
HHCCHHHHEEHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
LK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2 2-octaprenylphenol; O2 [C]

Specific reaction: 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]