| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078211
Identifier: 170078211
GI number: 170078211
Start: 1681544
End: 1684012
Strand: Direct
Name: 170078211
Synonym: SYNPCC7002_A1603
Alternate gene names: NA
Gene position: 1681544-1684012 (Clockwise)
Preceding gene: 170078210
Following gene: 170078212
Centisome position: 55.9
GC content: 43.26
Gene sequence:
>2469_bases ATGAAAGTCGGTAAGTTTGCACGCTACAAATCTTTAAAACATCGCGGCTTTACGCTTGTGGAAATTCTTTTGGCGATCGC CATGAGTTCCATTGTGGTGAGTGCAGCAGGCTATGCCATCGTTTTTGTCAGTAAGAAAAATCAAGTCTCTGAACTACAGT CAGTACGTCGGATTGAACTAAACCGCGCCCTAGACTTTATCGCCGATGATGTTCGTGAAGCAAGTAGTGTGAGAGGAAAT GAGGATAGTCCCGCTGATACTCGATTACAAATTATCAAAGCAGATAATAGTGTTGTTGAATATTACTACGATCCAGTTGC TTCTAGTGATGTTTGGTCAGGGCCCGGAGTTATTCGTAGGAAAGAAGGCGACAGTCCAGCCGAAGTACTGGTAGACGGTA TTGCTAGCGACATTAGTAGTCTTTCTGGTACTGGCTGTTCAGGTGATGATAATCTTATCGCGATTCCAAATACAGGATTT GTGGTTTGTATCAACAGTGCTTTCCGGACTGCGGATCTTGCCCTTTATGGTCGCCTTAATGTTGAGGATAAAGCCAGTCT TTCTGAAGAAGACTTTCTAATTGTTGCGACAAAATTTGTGACCCGAAATGCACCGCCTCCCCAAAGATGCATTATTCCCG ATTTAGTTGGGAAAACAAAAACTGAAGCCCAAGATCTATGGGATACTGCTGGTTTTATAAATAATTTGAATCTCATTGGA ACTGATGATGAGATTGCGATCCAAGGGCTTCCTGCCAATAGCGTTCAGGACTGTAGCAACACAACGATGGACGCAGGTGA TGACGATGACATTTGCACAGTGCCGAACTATGATAATGGCTCTACAACGATTAGTTCAGCTTACAGCAACTGGAATAGTA GTGATTTTACTGGGAGTTTTACGGCTAACGGCTTTGAAATCGATTCAAGCACCGATCTAAGCACTATAAACCGAACCATC GAAAGCCAAGCTCTTTCTCCTCAACCCTTCCAAAATAATGGCACAGAAGTTATCTGTACAGCCTCTATTAAGGTGACGGA AGAAACCTGTACTGTTCCGGATGTCACTGGTAAGCTTGAACTTCTGGCAATTGCTGAACTAACAGCTGCAGGTTTTACAA ATATCGATAAGGAAGTCCGTGCGGGCATCATAAACTTTACTGTTGATTACCAGTCTCCCACCGCAGGAGAAACAATATTC TGTTCTGCTCCAGTCACCATTGGTGAACCGAAATGTACTGTTCCTGAGTTCCGGGGAACAAACTCTGATAATCGTGCAAC CCTTTGGAGTAGCGCCCAATTTACTGGAACCCTAACCTACACTGGCCCAGCTAATACGAACCTAACTTGGCAGAGTATTG CTCCTGGGACAATTGAATTTTGTGATGCTGATATCGAAGTTAAGCCTGCTGCAACCTGCACAATTGATCCTGACCTCTTA GTCGGTCAAAATGTGAGCACAGCTCAAAGTAACTGGAGCAGTGCAGGTTTTTATGCTGATACTTTTGATTCTACTGAGGT TGCCAGTGGAGCCAATATTGCGGGTTTTGAATTTAGAGATCCTATTTCGGGAGATGTTATGACCGAAACCCTAAATGCTG ATGGTGAATACGAAATAGACTGCGGCACTCTCATCAAAGTGGATGATCAAGTCTGTACTGTACCGATTATGGAGCGTACA GGAGTCGCCGATCCAGCAAAAATCAGTTTGAGTACAGCCAGAACCAGATGGACAGGTGCTGGTTTTCCTGCAGGAAACCT AATCGAAGAGAAATTCTTAAGTACTACTGATGTAGTAAATGCTCAAAGTATTGCGGCTGGGACTGATTTAATCTGTAGCT CATCTGTCACAATTACTGGGACTGGTTGTGTGGTTCCAGATTTAGTGGGCAAAACTGCTTCGACAGTACAAAGCATTTGG ACAGGTGCTGGGTTTACCACAACCCTTGGCTCTTCTCTTACTGGTTGGCATAATGGTAGCACTCTCAATGTTTCTAATAA CTTGTCTAGTACCAGTTGGAATACTTTTACAACCTTTGGCCAGACACCAACACGAGGAGACCTGAGAGCTTGTACTGCGA CAGGCACTGTCTCTAACAATGCCCCTACCAATGTAACTGCAAGTCTTACATCAGCTAATGCTAGTAATAATGTAACCGAG TACACCGTTAACATTACCTGGGATTTCTCACTCTCGGCAGGTCGTTATTATGTCTTTACTTGTGAAAGCAACAACAAAAA TCAGACTTGTAATCCTACAGTAAACCGTAGTGACATCGAAAACTCAACCTCAATTGTGCGCTTTAATGGTAATCCCATCT TTACAGATAAACAAGCAACTCATATCTTCACCACTTCTTCTACGAATAAACAAAGATGTTATACAGTCGTTGCTAGAAAT ATTAGTGGGGATTCTCTAACGCCTCAAAGTATAGTCACAACAACGCCAAAGTCTTGCATTGTCTACTAG
Upstream 100 bases:
>100_bases CTATTACAATCTAAATAAAGCTATTCCGATTAGTTTTAGATTTTACCCATAAAAACTATTTTGCAATCATCATTTTCTTT CCTTTTGAGTCTCCTAAACC
Downstream 100 bases:
>100_bases GTAGTTGATATATATTTGGCTTTAAAATGATGTATCCATTAAAGCCTATAGATGCCACTTGCTCAAAATGAAAATAAAAT GATTATTTTTTTGAGAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues MKVGKFARYKSLKHRGFTLVEILLAIAMSSIVVSAAGYAIVFVSKKNQVSELQSVRRIELNRALDFIADDVREASSVRGN EDSPADTRLQIIKADNSVVEYYYDPVASSDVWSGPGVIRRKEGDSPAEVLVDGIASDISSLSGTGCSGDDNLIAIPNTGF VVCINSAFRTADLALYGRLNVEDKASLSEEDFLIVATKFVTRNAPPPQRCIIPDLVGKTKTEAQDLWDTAGFINNLNLIG TDDEIAIQGLPANSVQDCSNTTMDAGDDDDICTVPNYDNGSTTISSAYSNWNSSDFTGSFTANGFEIDSSTDLSTINRTI ESQALSPQPFQNNGTEVICTASIKVTEETCTVPDVTGKLELLAIAELTAAGFTNIDKEVRAGIINFTVDYQSPTAGETIF CSAPVTIGEPKCTVPEFRGTNSDNRATLWSSAQFTGTLTYTGPANTNLTWQSIAPGTIEFCDADIEVKPAATCTIDPDLL VGQNVSTAQSNWSSAGFYADTFDSTEVASGANIAGFEFRDPISGDVMTETLNADGEYEIDCGTLIKVDDQVCTVPIMERT GVADPAKISLSTARTRWTGAGFPAGNLIEEKFLSTTDVVNAQSIAAGTDLICSSSVTITGTGCVVPDLVGKTASTVQSIW TGAGFTTTLGSSLTGWHNGSTLNVSNNLSSTSWNTFTTFGQTPTRGDLRACTATGTVSNNAPTNVTASLTSANASNNVTE YTVNITWDFSLSAGRYYVFTCESNNKNQTCNPTVNRSDIENSTSIVRFNGNPIFTDKQATHIFTTSSTNKQRCYTVVARN ISGDSLTPQSIVTTTPKSCIVY
Sequences:
>Translated_822_residues MKVGKFARYKSLKHRGFTLVEILLAIAMSSIVVSAAGYAIVFVSKKNQVSELQSVRRIELNRALDFIADDVREASSVRGN EDSPADTRLQIIKADNSVVEYYYDPVASSDVWSGPGVIRRKEGDSPAEVLVDGIASDISSLSGTGCSGDDNLIAIPNTGF VVCINSAFRTADLALYGRLNVEDKASLSEEDFLIVATKFVTRNAPPPQRCIIPDLVGKTKTEAQDLWDTAGFINNLNLIG TDDEIAIQGLPANSVQDCSNTTMDAGDDDDICTVPNYDNGSTTISSAYSNWNSSDFTGSFTANGFEIDSSTDLSTINRTI ESQALSPQPFQNNGTEVICTASIKVTEETCTVPDVTGKLELLAIAELTAAGFTNIDKEVRAGIINFTVDYQSPTAGETIF CSAPVTIGEPKCTVPEFRGTNSDNRATLWSSAQFTGTLTYTGPANTNLTWQSIAPGTIEFCDADIEVKPAATCTIDPDLL VGQNVSTAQSNWSSAGFYADTFDSTEVASGANIAGFEFRDPISGDVMTETLNADGEYEIDCGTLIKVDDQVCTVPIMERT GVADPAKISLSTARTRWTGAGFPAGNLIEEKFLSTTDVVNAQSIAAGTDLICSSSVTITGTGCVVPDLVGKTASTVQSIW TGAGFTTTLGSSLTGWHNGSTLNVSNNLSSTSWNTFTTFGQTPTRGDLRACTATGTVSNNAPTNVTASLTSANASNNVTE YTVNITWDFSLSAGRYYVFTCESNNKNQTCNPTVNRSDIENSTSIVRFNGNPIFTDKQATHIFTTSSTNKQRCYTVVARN ISGDSLTPQSIVTTTPKSCIVY >Mature_822_residues MKVGKFARYKSLKHRGFTLVEILLAIAMSSIVVSAAGYAIVFVSKKNQVSELQSVRRIELNRALDFIADDVREASSVRGN EDSPADTRLQIIKADNSVVEYYYDPVASSDVWSGPGVIRRKEGDSPAEVLVDGIASDISSLSGTGCSGDDNLIAIPNTGF VVCINSAFRTADLALYGRLNVEDKASLSEEDFLIVATKFVTRNAPPPQRCIIPDLVGKTKTEAQDLWDTAGFINNLNLIG TDDEIAIQGLPANSVQDCSNTTMDAGDDDDICTVPNYDNGSTTISSAYSNWNSSDFTGSFTANGFEIDSSTDLSTINRTI ESQALSPQPFQNNGTEVICTASIKVTEETCTVPDVTGKLELLAIAELTAAGFTNIDKEVRAGIINFTVDYQSPTAGETIF CSAPVTIGEPKCTVPEFRGTNSDNRATLWSSAQFTGTLTYTGPANTNLTWQSIAPGTIEFCDADIEVKPAATCTIDPDLL VGQNVSTAQSNWSSAGFYADTFDSTEVASGANIAGFEFRDPISGDVMTETLNADGEYEIDCGTLIKVDDQVCTVPIMERT GVADPAKISLSTARTRWTGAGFPAGNLIEEKFLSTTDVVNAQSIAAGTDLICSSSVTITGTGCVVPDLVGKTASTVQSIW TGAGFTTTLGSSLTGWHNGSTLNVSNNLSSTSWNTFTTFGQTPTRGDLRACTATGTVSNNAPTNVTASLTSANASNNVTE YTVNITWDFSLSAGRYYVFTCESNNKNQTCNPTVNRSDIENSTSIVRFNGNPIFTDKQATHIFTTSSTNKQRCYTVVARN ISGDSLTPQSIVTTTPKSCIVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87605; Mature: 87605
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVGKFARYKSLKHRGFTLVEILLAIAMSSIVVSAAGYAIVFVSKKNQVSELQSVRRIEL CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHH NRALDFIADDVREASSVRGNEDSPADTRLQIIKADNSVVEYYYDPVASSDVWSGPGVIRR HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEE KEGDSPAEVLVDGIASDISSLSGTGCSGDDNLIAIPNTGFVVCINSAFRTADLALYGRLN CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEEEEECC VEDKASLSEEDFLIVATKFVTRNAPPPQRCIIPDLVGKTKTEAQDLWDTAGFINNLNLIG CCCCCCCCCCCEEEEEEEEHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCEEEE TDDEIAIQGLPANSVQDCSNTTMDAGDDDDICTVPNYDNGSTTISSAYSNWNSSDFTGSF CCCCEEEEECCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCEEE TANGFEIDSSTDLSTINRTIESQALSPQPFQNNGTEVICTASIKVTEETCTVPDVTGKLE ECCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEE LLAIAELTAAGFTNIDKEVRAGIINFTVDYQSPTAGETIFCSAPVTIGEPKCTVPEFRGT EEEEEHHHHCCCCCCCHHHHCEEEEEEEECCCCCCCCEEEEECCEEECCCCCCCCCCCCC NSDNRATLWSSAQFTGTLTYTGPANTNLTWQSIAPGTIEFCDADIEVKPAATCTIDPDLL CCCCCEEEEECCEEEEEEEECCCCCCCEEEECCCCCEEEEECCCEEECCCEEEEECCCEE VGQNVSTAQSNWSSAGFYADTFDSTEVASGANIAGFEFRDPISGDVMTETLNADGEYEID ECCCCCHHHCCCCCCCEEEECCCCCHHCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEC CGTLIKVDDQVCTVPIMERTGVADPAKISLSTARTRWTGAGFPAGNLIEEKFLSTTDVVN CCEEEEECCCEEEEEEHHHCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHCCHHHCCC AQSIAAGTDLICSSSVTITGTGCVVPDLVGKTASTVQSIWTGAGFTTTLGSSLTGWHNGS CHHHCCCCCEEECCCEEEEECCCCCHHHHCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCC TLNVSNNLSSTSWNTFTTFGQTPTRGDLRACTATGTVSNNAPTNVTASLTSANASNNVTE EEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEE YTVNITWDFSLSAGRYYVFTCESNNKNQTCNPTVNRSDIENSTSIVRFNGNPIFTDKQAT EEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCE HIFTTSSTNKQRCYTVVARNISGDSLTPQSIVTTTPKSCIVY EEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCEEEC >Mature Secondary Structure MKVGKFARYKSLKHRGFTLVEILLAIAMSSIVVSAAGYAIVFVSKKNQVSELQSVRRIEL CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHH NRALDFIADDVREASSVRGNEDSPADTRLQIIKADNSVVEYYYDPVASSDVWSGPGVIRR HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEE KEGDSPAEVLVDGIASDISSLSGTGCSGDDNLIAIPNTGFVVCINSAFRTADLALYGRLN CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEEEEECC VEDKASLSEEDFLIVATKFVTRNAPPPQRCIIPDLVGKTKTEAQDLWDTAGFINNLNLIG CCCCCCCCCCCEEEEEEEEHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCEEEE TDDEIAIQGLPANSVQDCSNTTMDAGDDDDICTVPNYDNGSTTISSAYSNWNSSDFTGSF CCCCEEEEECCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCEEE TANGFEIDSSTDLSTINRTIESQALSPQPFQNNGTEVICTASIKVTEETCTVPDVTGKLE ECCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEE LLAIAELTAAGFTNIDKEVRAGIINFTVDYQSPTAGETIFCSAPVTIGEPKCTVPEFRGT EEEEEHHHHCCCCCCCHHHHCEEEEEEEECCCCCCCCEEEEECCEEECCCCCCCCCCCCC NSDNRATLWSSAQFTGTLTYTGPANTNLTWQSIAPGTIEFCDADIEVKPAATCTIDPDLL CCCCCEEEEECCEEEEEEEECCCCCCCEEEECCCCCEEEEECCCEEECCCEEEEECCCEE VGQNVSTAQSNWSSAGFYADTFDSTEVASGANIAGFEFRDPISGDVMTETLNADGEYEID ECCCCCHHHCCCCCCCEEEECCCCCHHCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEC CGTLIKVDDQVCTVPIMERTGVADPAKISLSTARTRWTGAGFPAGNLIEEKFLSTTDVVN CCEEEEECCCEEEEEEHHHCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHCCHHHCCC AQSIAAGTDLICSSSVTITGTGCVVPDLVGKTASTVQSIWTGAGFTTTLGSSLTGWHNGS CHHHCCCCCEEECCCEEEEECCCCCHHHHCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCC TLNVSNNLSSTSWNTFTTFGQTPTRGDLRACTATGTVSNNAPTNVTASLTSANASNNVTE EEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEE YTVNITWDFSLSAGRYYVFTCESNNKNQTCNPTVNRSDIENSTSIVRFNGNPIFTDKQAT EEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCE HIFTTSSTNKQRCYTVVARNISGDSLTPQSIVTTTPKSCIVY EEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA