| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hemK [C]
Identifier: 170078207
GI number: 170078207
Start: 1677718
End: 1678593
Strand: Direct
Name: hemK [C]
Synonym: SYNPCC7002_A1599
Alternate gene names: 170078207
Gene position: 1677718-1678593 (Clockwise)
Preceding gene: 170078206
Following gene: 170078208
Centisome position: 55.77
GC content: 52.85
Gene sequence:
>876_bases TTGAGTGAGATTATTGCGGCTCAGGATTTAGTACGGTGGCGACAGTGGGCCAAAACCCAGGCGATCGCCACCGATATTTC TGTTGAGGAAGTGGATTGGTTTCTCCAGGGGCTGACCACTGTGGATCGGTTGAGTTTGTGGCTGGGGATTCGGGAAGCTG TGCAGAGTCAGGTGTCTTTGGTTGAACTTTCACGACTCTGGGAACGGCGCTGCCAAGAGAAAATCCCGGTGCAATATCTC GTCGGGAAAACGCCCTGGCGCAATTTTGAGCTAGTTGTTTCTCCTGCGGTCTTGATCCCTCGACCCGAAACGGAATATTT AATTGATCTGGCCCAGGCGAGTCATCGTGATTTACACGCAGGTCATTGGATCGATCTAGGAACGGGCAGTGGGGCGATCG CCTTGGGTTTGGCCGACAGTTTTCCCAACGGAAAGATTCATGCCGTTGATCAGAGTGCCGCCGCCCTTGAGGTCGCCCGA AAAAATGCGATCGCCTACGGATCACAAGATCGAATTCAGTTTTACCATGGCAATTGGTGGGAACCGCTGCAACACCTACG GGGACAGGTGACGGGTATGGTCTCGAATCCCCCCTATATTCCCGCTGCCCTGCTGCCGGATTTACAACCAGAGGTTTATC GCCATGAACCCCATAGCGCCCTTGATGGGGGCATGGATGGGTTAGCGGACCTACGAATTTTGGTAAATGAAGCGCCGGAC TATCTTATTTCTGGTGGCATTTGGCTCGTTGAACTGATGCGTGGCCAGGGGGAAACGGTGGCGCAATTACTCGCAGACAA TGGTCATTACACTCAAATTCAGATCATTCATGACTTTGCTGGGGGCGATCGCTACGTATCTGCTCAGCGCAAGTAA
Upstream 100 bases:
>100_bases GTCGATGACCCTAATTCCCTCGACGGAATCGGCCCAGTTGATCCAAGCTGTCATTGAGCAGCAACGGCAACAACAATAGG GTATTGGGAACGGTTGATTC
Downstream 100 bases:
>100_bases ATATTAGTTTCATCGTGATCAGAGTCACGATAGCTTGCTTTAGGAAAACTTAATTTTAATTTGGGCTAGATATTTACTCT AGGACGGGAATACTCATTTT
Product: methyltransferase, methylase of peptide chain release factors
Products: NA
Alternate protein names: M.Ssp6803HemKP [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSEIIAAQDLVRWRQWAKTQAIATDISVEEVDWFLQGLTTVDRLSLWLGIREAVQSQVSLVELSRLWERRCQEKIPVQYL VGKTPWRNFELVVSPAVLIPRPETEYLIDLAQASHRDLHAGHWIDLGTGSGAIALGLADSFPNGKIHAVDQSAAALEVAR KNAIAYGSQDRIQFYHGNWWEPLQHLRGQVTGMVSNPPYIPAALLPDLQPEVYRHEPHSALDGGMDGLADLRILVNEAPD YLISGGIWLVELMRGQGETVAQLLADNGHYTQIQIIHDFAGGDRYVSAQRK
Sequences:
>Translated_291_residues MSEIIAAQDLVRWRQWAKTQAIATDISVEEVDWFLQGLTTVDRLSLWLGIREAVQSQVSLVELSRLWERRCQEKIPVQYL VGKTPWRNFELVVSPAVLIPRPETEYLIDLAQASHRDLHAGHWIDLGTGSGAIALGLADSFPNGKIHAVDQSAAALEVAR KNAIAYGSQDRIQFYHGNWWEPLQHLRGQVTGMVSNPPYIPAALLPDLQPEVYRHEPHSALDGGMDGLADLRILVNEAPD YLISGGIWLVELMRGQGETVAQLLADNGHYTQIQIIHDFAGGDRYVSAQRK >Mature_290_residues SEIIAAQDLVRWRQWAKTQAIATDISVEEVDWFLQGLTTVDRLSLWLGIREAVQSQVSLVELSRLWERRCQEKIPVQYLV GKTPWRNFELVVSPAVLIPRPETEYLIDLAQASHRDLHAGHWIDLGTGSGAIALGLADSFPNGKIHAVDQSAAALEVARK NAIAYGSQDRIQFYHGNWWEPLQHLRGQVTGMVSNPPYIPAALLPDLQPEVYRHEPHSALDGGMDGLADLRILVNEAPDY LISGGIWLVELMRGQGETVAQLLADNGHYTQIQIIHDFAGGDRYVSAQRK
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=265, Percent_Identity=32.4528301886792, Blast_Score=97, Evalue=1e-20, Organism=Escherichia coli, GI1787463, Length=273, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87082085, Length=277, Percent_Identity=31.0469314079422, Blast_Score=106, Evalue=2e-24, Organism=Drosophila melanogaster, GI24582226, Length=196, Percent_Identity=33.6734693877551, Blast_Score=107, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 32509; Mature: 32378
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIIAAQDLVRWRQWAKTQAIATDISVEEVDWFLQGLTTVDRLSLWLGIREAVQSQVSL CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VELSRLWERRCQEKIPVQYLVGKTPWRNFELVVSPAVLIPRPETEYLIDLAQASHRDLHA HHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECEEEECCCCHHHHHHHHHHCCCCCCC GHWIDLGTGSGAIALGLADSFPNGKIHAVDQSAAALEVARKNAIAYGSQDRIQFYHGNWW CCEEEECCCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCHH EPLQHLRGQVTGMVSNPPYIPAALLPDLQPEVYRHEPHSALDGGMDGLADLRILVNEAPD HHHHHHHHHEEEEECCCCCCCHHHCCCCCCHHHCCCCCHHHCCCCCCHHHHHHHHHCCCC YLISGGIWLVELMRGQGETVAQLLADNGHYTQIQIIHDFAGGDRYVSAQRK EEEECCHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCC >Mature Secondary Structure SEIIAAQDLVRWRQWAKTQAIATDISVEEVDWFLQGLTTVDRLSLWLGIREAVQSQVSL CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VELSRLWERRCQEKIPVQYLVGKTPWRNFELVVSPAVLIPRPETEYLIDLAQASHRDLHA HHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECEEEECCCCHHHHHHHHHHCCCCCCC GHWIDLGTGSGAIALGLADSFPNGKIHAVDQSAAALEVARKNAIAYGSQDRIQFYHGNWW CCEEEECCCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCHH EPLQHLRGQVTGMVSNPPYIPAALLPDLQPEVYRHEPHSALDGGMDGLADLRILVNEAPD HHHHHHHHHEEEEECCCCCCCHHHCCCCCCHHHCCCCCHHHCCCCCCHHHHHHHHHCCCC YLISGGIWLVELMRGQGETVAQLLADNGHYTQIQIIHDFAGGDRYVSAQRK EEEECCHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]