| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078206
Identifier: 170078206
GI number: 170078206
Start: 1676788
End: 1677696
Strand: Direct
Name: 170078206
Synonym: SYNPCC7002_A1598
Alternate gene names: NA
Gene position: 1676788-1677696 (Clockwise)
Preceding gene: 170078205
Following gene: 170078207
Centisome position: 55.74
GC content: 48.18
Gene sequence:
>909_bases TTGACGGCTTATTTTTTTAGGATTAATTTTTCTAATCTTGCAGTTATTTTGTTTGAGGTTTTATTTATGAAAAGTCTGGT TCGTTTGGGTCAAAAAGCCCTACTGATGGGCACGGTAATCGCCGGAACAATCTTAGGTGTTAATGGCAGTGTGTTGGCGC TCCCTGAGGCAGCCGTCGTCGAAAAGCTCCGGCCAATTCCGATGTATATGCTGATCAACGACGAAGGGCAGCCCATTTTT GCGACAGTCACCGACCAGAATGGTGGCGAGTCGGGGGTTACGGGCGTTTTTGTGAGTCTTTCGGATGCTGAAAACCTCGT GGCGGCCCGCCAAACAGAATCGAAAAGACTCCTCGATGCGGAACGGGCAAAACCCAATGCCGATCCCCAAATTGTCGCTG AACTAGAAGCTCAAGCGGCCCTGTGGCAAGAGGCTAATGTTCTTCCCATCGGTTTAGATAAGATCTACCAGTTTGCCCAA AGCGATGAAGCAGAAGATTTGACCTTTAAGTTTTTGCCGACCATGGCGCAGTTAAATGCGGCGGCCCAAGTGACGCAACA GGAAAACTTCCCCGGTGTGCCTTTATTTTTCCTCTCGATTCAGGAAAAGGATGCCAACGGACAAGATATTGTTTCTTTCC CAACTCTGGCAGGGGATGACAACAATGGCAACGGTGAGATCCCTGTTTTCTTTGAAGTGCAGCCGATTCTTGAGCAATTA GATGCTTTCCCGGAAGATGAAGAGCTGAGTATTAATGTAATGCCCCTTGAGGTATTTATCGCAAAACTGCTCGATGAGGA TCTACCCGCAGAGGAGCAGGAATTTTTGGAGTCGATGACCCTAATTCCCTCGACGGAATCGGCCCAGTTGATCCAAGCTG TCATTGAGCAGCAACGGCAACAACAATAG
Upstream 100 bases:
>100_bases CTGCAACATCCGTCATCCATGGGAGACCCCAGTTCATCTAGATCATGGCGTAGACTGCCGCTTTTTTAATGGGGATTTCT AAGACGTAAACCAAAGTATT
Downstream 100 bases:
>100_bases GGTATTGGGAACGGTTGATTCTTGAGTGAGATTATTGCGGCTCAGGATTTAGTACGGTGGCGACAGTGGGCCAAAACCCA GGCGATCGCCACCGATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Tic22-Like Family; Tic22-Like; Tic22-Like Family Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTAYFFRINFSNLAVILFEVLFMKSLVRLGQKALLMGTVIAGTILGVNGSVLALPEAAVVEKLRPIPMYMLINDEGQPIF ATVTDQNGGESGVTGVFVSLSDAENLVAARQTESKRLLDAERAKPNADPQIVAELEAQAALWQEANVLPIGLDKIYQFAQ SDEAEDLTFKFLPTMAQLNAAAQVTQQENFPGVPLFFLSIQEKDANGQDIVSFPTLAGDDNNGNGEIPVFFEVQPILEQL DAFPEDEELSINVMPLEVFIAKLLDEDLPAEEQEFLESMTLIPSTESAQLIQAVIEQQRQQQ
Sequences:
>Translated_302_residues MTAYFFRINFSNLAVILFEVLFMKSLVRLGQKALLMGTVIAGTILGVNGSVLALPEAAVVEKLRPIPMYMLINDEGQPIF ATVTDQNGGESGVTGVFVSLSDAENLVAARQTESKRLLDAERAKPNADPQIVAELEAQAALWQEANVLPIGLDKIYQFAQ SDEAEDLTFKFLPTMAQLNAAAQVTQQENFPGVPLFFLSIQEKDANGQDIVSFPTLAGDDNNGNGEIPVFFEVQPILEQL DAFPEDEELSINVMPLEVFIAKLLDEDLPAEEQEFLESMTLIPSTESAQLIQAVIEQQRQQQ >Mature_301_residues TAYFFRINFSNLAVILFEVLFMKSLVRLGQKALLMGTVIAGTILGVNGSVLALPEAAVVEKLRPIPMYMLINDEGQPIFA TVTDQNGGESGVTGVFVSLSDAENLVAARQTESKRLLDAERAKPNADPQIVAELEAQAALWQEANVLPIGLDKIYQFAQS DEAEDLTFKFLPTMAQLNAAAQVTQQENFPGVPLFFLSIQEKDANGQDIVSFPTLAGDDNNGNGEIPVFFEVQPILEQLD AFPEDEELSINVMPLEVFIAKLLDEDLPAEEQEFLESMTLIPSTESAQLIQAVIEQQRQQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33163; Mature: 33032
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYFFRINFSNLAVILFEVLFMKSLVRLGQKALLMGTVIAGTILGVNGSVLALPEAAVV CEEEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEECCCCCEEECCCHHHH EKLRPIPMYMLINDEGQPIFATVTDQNGGESGVTGVFVSLSDAENLVAARQTESKRLLDA HHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH ERAKPNADPQIVAELEAQAALWQEANVLPIGLDKIYQFAQSDEAEDLTFKFLPTMAQLNA HHCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AAQVTQQENFPGVPLFFLSIQEKDANGQDIVSFPTLAGDDNNGNGEIPVFFEVQPILEQL HHHHHHHCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHH DAFPEDEELSINVMPLEVFIAKLLDEDLPAEEQEFLESMTLIPSTESAQLIQAVIEQQRQ HCCCCCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QQ CC >Mature Secondary Structure TAYFFRINFSNLAVILFEVLFMKSLVRLGQKALLMGTVIAGTILGVNGSVLALPEAAVV EEEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEECCCCCEEECCCHHHH EKLRPIPMYMLINDEGQPIFATVTDQNGGESGVTGVFVSLSDAENLVAARQTESKRLLDA HHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH ERAKPNADPQIVAELEAQAALWQEANVLPIGLDKIYQFAQSDEAEDLTFKFLPTMAQLNA HHCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AAQVTQQENFPGVPLFFLSIQEKDANGQDIVSFPTLAGDDNNGNGEIPVFFEVQPILEQL HHHHHHHCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHH DAFPEDEELSINVMPLEVFIAKLLDEDLPAEEQEFLESMTLIPSTESAQLIQAVIEQQRQ HCCCCCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA