The gene/protein map for NC_010475 is currently unavailable.
Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078196

Identifier: 170078196

GI number: 170078196

Start: 1668678

End: 1669082

Strand: Direct

Name: 170078196

Synonym: SYNPCC7002_A1587

Alternate gene names: NA

Gene position: 1668678-1669082 (Clockwise)

Preceding gene: 170078195

Following gene: 170078197

Centisome position: 55.47

GC content: 49.63

Gene sequence:

>405_bases
ATGTTTAAAACTATTCTTTTTCCCGTTGATAAAAGTCGTGAAGCCCGTGAAGCGGCGGAGACAGTGATTCAGCTTGTGAA
ATCTTTCCAAAGTCGTTTAGTCCTGCTCTCCGTGGTCGAACCGACAGAGCCAGAGGAACGCCAGGGGGTGATGAATTCCG
AAGAAGCGGTGGCCAAGCTCCTCCAGGGAGCCCATGATCTCTTTGCCCAAGCGGGGATCGAAGCGGAGATTATTGAACGG
GAAGGGATGCCATCTTTTACTATTTGTGATGTGGCCGATGAAATTGAAGCTGATCTAATTGTGATGGGCTGTCGGGGTAT
GGGCTTAACCCAAGAAGGAGTCGCCGAAAGTGTCACGAGCAAAGTTACGAATCTTTCTCCTTGTCCGGTCTTGATTATCC
CCTAG

Upstream 100 bases:

>100_bases
AAGACCATTTTTCCGAGAAAATTGAACTAGAAGTTCCAAATCCAGAAAAATATCTCCATGCAGATTTTACCGGAGCCTGT
GTCTAGGAGGTAGAGCTACC

Downstream 100 bases:

>100_bases
GGATTTGCTCTGCCAGTTAAATATCCAGCTTGAGATCACTGCTCTTTTTTTCTACAGGGCGGAGGCGATCACCTTTTGCT
GTTCAGCCTTTTCGCCCATG

Product: universal stress protein

Products: NA

Alternate protein names: USP Sll1654 [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MFKTILFPVDKSREAREAAETVIQLVKSFQSRLVLLSVVEPTEPEERQGVMNSEEAVAKLLQGAHDLFAQAGIEAEIIER
EGMPSFTICDVADEIEADLIVMGCRGMGLTQEGVAESVTSKVTNLSPCPVLIIP

Sequences:

>Translated_134_residues
MFKTILFPVDKSREAREAAETVIQLVKSFQSRLVLLSVVEPTEPEERQGVMNSEEAVAKLLQGAHDLFAQAGIEAEIIER
EGMPSFTICDVADEIEADLIVMGCRGMGLTQEGVAESVTSKVTNLSPCPVLIIP
>Mature_134_residues
MFKTILFPVDKSREAREAAETVIQLVKSFQSRLVLLSVVEPTEPEERQGVMNSEEAVAKLLQGAHDLFAQAGIEAEIIER
EGMPSFTICDVADEIEADLIVMGCRGMGLTQEGVAESVTSKVTNLSPCPVLIIP

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 14560; Mature: 14560

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTILFPVDKSREAREAAETVIQLVKSFQSRLVLLSVVEPTEPEERQGVMNSEEAVAKL
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHCCCCCCHHHHHHH
LQGAHDLFAQAGIEAEIIEREGMPSFTICDVADEIEADLIVMGCRGMGLTQEGVAESVTS
HHHHHHHHHHCCCCCEEHHCCCCCCEEEECCHHHHCCCEEEEECCCCCCCHHHHHHHHHH
KVTNLSPCPVLIIP
HHCCCCCCCEEEEC
>Mature Secondary Structure
MFKTILFPVDKSREAREAAETVIQLVKSFQSRLVLLSVVEPTEPEERQGVMNSEEAVAKL
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHCCCCCCHHHHHHH
LQGAHDLFAQAGIEAEIIEREGMPSFTICDVADEIEADLIVMGCRGMGLTQEGVAESVTS
HHHHHHHHHHCCCCCEEHHCCCCCCEEEECCHHHHCCCEEEEECCCCCCCHHHHHHHHHH
KVTNLSPCPVLIIP
HHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]