| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078165
Identifier: 170078165
GI number: 170078165
Start: 1641960
End: 1642664
Strand: Direct
Name: 170078165
Synonym: SYNPCC7002_A1556
Alternate gene names: NA
Gene position: 1641960-1642664 (Clockwise)
Preceding gene: 170078164
Following gene: 170078166
Centisome position: 54.59
GC content: 48.79
Gene sequence:
>705_bases ATGTTTTCCCAGTTACCCACCGACAACCGCGAATTAAATTGGTTTACCCTCACGGAGGCGATCGCCAAACGTTTCGACGC AGAATACCAAAACCAAAGGCCCGATCTTCCCGACGAAGTACAAGCCCTGCCTATTTTCCTCGACTGGCAATCCGGCAAAC TCCAGAACCGTGTCACCTCGAAATTTTGGGAACTAGCCCAACCGAAAAAAAACCAAGCTTGCCTTGATCTCGGTTGTGGG ATCAGCTTTTTGATCTATCCTTGGCGCGACTGGAATGCCTATTTTTACGGCCAAGACATCAGCAAAATTGCCACAGAAAT CCTCCAATCCCGCGCCCCCCAGCTTAATTCCAAACTGTTTAAAGGCATCTCAAACAAACCCGCCCATCACCTCGAAAGCT ACCAGGACAGTTTTTTCGATTTGGCGATCGCCACCGGATTTAGCTGTTACTATCCCTTGGAATATTGGGAAACCGTGTTA GAACAAGTCCGGCGCGTCCTCAAACCAGGGGGCTTTTTTGTCTTTGATGTGATTGACCCAAGCCAAGATATGGCCGAAGA CTGGTCAATCCTGGAAACCTACCTGGGCGCGGAAGTATTCCTCGAAGACCTAAGCAACTGGCAAGCCCTGATCAAAAAAT CCGGCGCAAAAATCGTCAAAGAACAATCGGGCGAACTGTTCCATCTCTACAAAATTCGCTGGTAA
Upstream 100 bases:
>100_bases TTGAAACTGACTTTATCCCCCAACTTGCGATGACGGATTCCCTGTAGATTGAGACTTGTACAATGGAATGGTTTGAATTT TCTAAACTTCGGGGCGGCCC
Downstream 100 bases:
>100_bases AGCCATTCTTCTGATTGGATGTTGGCGGTTTGTCAGGTCAGTGAGAAGATAAAAAGCGTGGCTTATCAAGGACTGTGGGA AATGTTTAAGCGGATTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MFSQLPTDNRELNWFTLTEAIAKRFDAEYQNQRPDLPDEVQALPIFLDWQSGKLQNRVTSKFWELAQPKKNQACLDLGCG ISFLIYPWRDWNAYFYGQDISKIATEILQSRAPQLNSKLFKGISNKPAHHLESYQDSFFDLAIATGFSCYYPLEYWETVL EQVRRVLKPGGFFVFDVIDPSQDMAEDWSILETYLGAEVFLEDLSNWQALIKKSGAKIVKEQSGELFHLYKIRW
Sequences:
>Translated_234_residues MFSQLPTDNRELNWFTLTEAIAKRFDAEYQNQRPDLPDEVQALPIFLDWQSGKLQNRVTSKFWELAQPKKNQACLDLGCG ISFLIYPWRDWNAYFYGQDISKIATEILQSRAPQLNSKLFKGISNKPAHHLESYQDSFFDLAIATGFSCYYPLEYWETVL EQVRRVLKPGGFFVFDVIDPSQDMAEDWSILETYLGAEVFLEDLSNWQALIKKSGAKIVKEQSGELFHLYKIRW >Mature_234_residues MFSQLPTDNRELNWFTLTEAIAKRFDAEYQNQRPDLPDEVQALPIFLDWQSGKLQNRVTSKFWELAQPKKNQACLDLGCG ISFLIYPWRDWNAYFYGQDISKIATEILQSRAPQLNSKLFKGISNKPAHHLESYQDSFFDLAIATGFSCYYPLEYWETVL EQVRRVLKPGGFFVFDVIDPSQDMAEDWSILETYLGAEVFLEDLSNWQALIKKSGAKIVKEQSGELFHLYKIRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27315; Mature: 27315
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSQLPTDNRELNWFTLTEAIAKRFDAEYQNQRPDLPDEVQALPIFLDWQSGKLQNRVTS CCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHCEEEEEEECCCCCHHHHHHH KFWELAQPKKNQACLDLGCGISFLIYPWRDWNAYFYGQDISKIATEILQSRAPQLNSKLF HHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHH KGISNKPAHHLESYQDSFFDLAIATGFSCYYPLEYWETVLEQVRRVLKPGGFFVFDVIDP HCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCEEEEEEECC SQDMAEDWSILETYLGAEVFLEDLSNWQALIKKSGAKIVKEQSGELFHLYKIRW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECC >Mature Secondary Structure MFSQLPTDNRELNWFTLTEAIAKRFDAEYQNQRPDLPDEVQALPIFLDWQSGKLQNRVTS CCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHCEEEEEEECCCCCHHHHHHH KFWELAQPKKNQACLDLGCGISFLIYPWRDWNAYFYGQDISKIATEILQSRAPQLNSKLF HHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHH KGISNKPAHHLESYQDSFFDLAIATGFSCYYPLEYWETVLEQVRRVLKPGGFFVFDVIDP HCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCEEEEEEECC SQDMAEDWSILETYLGAEVFLEDLSNWQALIKKSGAKIVKEQSGELFHLYKIRW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA