| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078153
Identifier: 170078153
GI number: 170078153
Start: 1630780
End: 1631436
Strand: Direct
Name: 170078153
Synonym: SYNPCC7002_A1544
Alternate gene names: NA
Gene position: 1630780-1631436 (Clockwise)
Preceding gene: 170078151
Following gene: 170078158
Centisome position: 54.21
GC content: 54.79
Gene sequence:
>657_bases ATGACACCAGAGATTTTTCGGCAGCGTTATCCCTACGGGGGCTTAATCAGTGAACTGGCAGCCATTGAACATGGTCAGTT CATTGTGCGGGTTGTGGTGGAACTGGAAGGCAAAAAACTCGCCAGTGGTTTGGCTGCCGCTCCCTCTGTGGAACAGGCGG AGGATCAAGCGAGAATCCGGGCTTTAAATCTGTTGGGGTCTGGGGCAATTCCGGCTCCGGCCCCGGCGAAACAAACTAGG CTGGATCAATCCCCTACATCAACTCCGGTAGTCCCTGCAAAACCCGCCCCGGCGATCGCCCCACCAACGGTTACAGCCCC GACCACTCCGGCACCAATACCGAGTCATCAAAATGATTTGCCCTTGCCATCTCCGGCTAATATCGTAGACCAGACGCCTC AAATCCCCCTAGAGCAGCCCCAAGCGATACCAGACGCAACCCTCGACTTAGAGTCAGCAGGCAGCTCGACAGACGCGTTG GATTTTTCTGAGATTATTGCCCGCAGTGACGTGGAACTCAAGCGTTTGGGCTGGTCGAGTGAGCAGGGACGCACCTATTT GCTCGAAACCTATGGGAAGCGATCGCGCCAATTACTATCCGATGATGAGTTGCTCGAATTTTTGCGCTACCTGGAATCTC AACCGACGCCCTCTTAA
Upstream 100 bases:
>100_bases CTTCCGGGGAATTCACCACCAAAGTGCTCTGAATTAGGAAGAATAAGGGTACAATTGCACTCAACTAATAAATTGAGTTA AACTTTTCCTATTGCGTTCC
Downstream 100 bases:
>100_bases ATTTCGGGCCGGGGCGATTAGATGCCTTTTAAGTAACTCAATGGTCGTTTAGATCGGTCAATCCCAAAACTATCCGGCAA CGAGGTTTAACAACCCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTPEIFRQRYPYGGLISELAAIEHGQFIVRVVVELEGKKLASGLAAAPSVEQAEDQARIRALNLLGSGAIPAPAPAKQTR LDQSPTSTPVVPAKPAPAIAPPTVTAPTTPAPIPSHQNDLPLPSPANIVDQTPQIPLEQPQAIPDATLDLESAGSSTDAL DFSEIIARSDVELKRLGWSSEQGRTYLLETYGKRSRQLLSDDELLEFLRYLESQPTPS
Sequences:
>Translated_218_residues MTPEIFRQRYPYGGLISELAAIEHGQFIVRVVVELEGKKLASGLAAAPSVEQAEDQARIRALNLLGSGAIPAPAPAKQTR LDQSPTSTPVVPAKPAPAIAPPTVTAPTTPAPIPSHQNDLPLPSPANIVDQTPQIPLEQPQAIPDATLDLESAGSSTDAL DFSEIIARSDVELKRLGWSSEQGRTYLLETYGKRSRQLLSDDELLEFLRYLESQPTPS >Mature_217_residues TPEIFRQRYPYGGLISELAAIEHGQFIVRVVVELEGKKLASGLAAAPSVEQAEDQARIRALNLLGSGAIPAPAPAKQTRL DQSPTSTPVVPAKPAPAIAPPTVTAPTTPAPIPSHQNDLPLPSPANIVDQTPQIPLEQPQAIPDATLDLESAGSSTDALD FSEIIARSDVELKRLGWSSEQGRTYLLETYGKRSRQLLSDDELLEFLRYLESQPTPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23417; Mature: 23285
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEIFRQRYPYGGLISELAAIEHGQFIVRVVVELEGKKLASGLAAAPSVEQAEDQARIR CCHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH ALNLLGSGAIPAPAPAKQTRLDQSPTSTPVVPAKPAPAIAPPTVTAPTTPAPIPSHQNDL HHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLPSPANIVDQTPQIPLEQPQAIPDATLDLESAGSSTDALDFSEIIARSDVELKRLGWSS CCCCCCHHHCCCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCHHHHHHHCCCHHHHCCCCC EQGRTYLLETYGKRSRQLLSDDELLEFLRYLESQPTPS CCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TPEIFRQRYPYGGLISELAAIEHGQFIVRVVVELEGKKLASGLAAAPSVEQAEDQARIR CHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH ALNLLGSGAIPAPAPAKQTRLDQSPTSTPVVPAKPAPAIAPPTVTAPTTPAPIPSHQNDL HHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLPSPANIVDQTPQIPLEQPQAIPDATLDLESAGSSTDALDFSEIIARSDVELKRLGWSS CCCCCCHHHCCCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCHHHHHHHCCCHHHHCCCCC EQGRTYLLETYGKRSRQLLSDDELLEFLRYLESQPTPS CCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8467083; 8905231 [H]