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The map label for this gene is obgE

Identifier: 170078130

GI number: 170078130

Start: 1606449

End: 1607513

Strand: Reverse

Name: obgE

Synonym: SYNPCC7002_A1521

Alternate gene names: 170078130

Gene position: 1607513-1606449 (Counterclockwise)

Preceding gene: 170078137

Following gene: 170078110

Centisome position: 53.44

GC content: 50.33

Gene sequence:

>1065_bases
ATGCAATTTATTGACCACGCTGAAATTGAAGTTATCGCCGGAAAAGGGGGAGATGGAATCGTTGCCTTTCGTCGCGAAAA
ATACGTGCCTGCTGGTGGCCCGGCGGGGGGTAATGGCGGCTGGGGAGGTTCAGTGATCTTTCGGGCAGAGGAAAACCTGC
AAACCCTCCTCGATTTTCGTTATGCCCGCACCTTTAAAGCCCAGGACGGCGAACGGGGTGGCCCCAATAATTGCACTGGC
GCTTCTGGGGAAGACCTGATTGTGGATGTGCCCTGTGGCACGGTAATTTACGACCGGGAAACCGACGAAGAAATTGGTGA
TTTAGTCTTCCACGGACAAATCTTTTGCGTCGCCAAAGGCGGTAAAGGAGGCCTGGGAAACAAGCATTTTCTCAGCAATA
AAAACCGCGCCCCAGAATATGCTCTCCCCGGTTTGGAAGGGGAAATCAAGCAACTGCGCCTAGAGCTGAAATTACTGGCA
GAAGTGGGCATTATCGGCCTCCCCAATGCCGGGAAATCGACCCTAATCTCTGCGTTGTCGGCGGCTCGGCCCAAAATCGG
CGCTTATCCGTTTACAACTTTAATCCCTAATTTAGGCGTGGTGAAACGGCCAACAGGGGATGGCACGGTATTTGCGGATA
TTCCAGGCTTAATTGAGGGGGCACACCAAGGGGTAGGCTTGGGCCATGAATTTTTACGTCACATTGAGCGCACGAAGGTT
TTGGTGCATTTAGTGGATCTCAATGCAGAAGATCCAATTAAAAATTACGAAACGATCCAGGGAGAACTAGAAGCTTATGG
TCGCGGTTTACCAGAACTCCCCCAGATCATTGCCCTCAATAAACTCGATGCAGGCGATCACGAATTTGCAGATTTCATCA
CGGAGGAATTACGGCGGCTGACCGACGCCAAAATTCTGACCATTTCAGCGGTATCCAGAACTGGTCTAGAACAGTTGCTA
CAAGAGATTTGGGACGTCTTAGACTACCTCAAAGAGATCAGCCGAAATGAAGCACCCGAAACCTCAGTCATGGATCTTGA
AAGTCTTCACATTGCAGATGAATGA

Upstream 100 bases:

>100_bases
CCAAGACTTCCGCTAGATTACAGTTCCGATCTGGCGCATCCGATGGCGGAAAAGCAGAGTATAATAATTGATTGCCCAAA
ATCACCAGATTCTATTTCCC

Downstream 100 bases:

>100_bases
TGCGGGGCTTTAAGGCGATCGCCGGATTACCACCATAGATAGTCATCGGGTCGAGCGATCGCAAGGCAACACTCCCTAAA
CAAAGCACCGCCCCTTCGCC

Product: GTPase ObgE

Products: NA

Alternate protein names: GTP-binding protein obg

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MQFIDHAEIEVIAGKGGDGIVAFRREKYVPAGGPAGGNGGWGGSVIFRAEENLQTLLDFRYARTFKAQDGERGGPNNCTG
ASGEDLIVDVPCGTVIYDRETDEEIGDLVFHGQIFCVAKGGKGGLGNKHFLSNKNRAPEYALPGLEGEIKQLRLELKLLA
EVGIIGLPNAGKSTLISALSAARPKIGAYPFTTLIPNLGVVKRPTGDGTVFADIPGLIEGAHQGVGLGHEFLRHIERTKV
LVHLVDLNAEDPIKNYETIQGELEAYGRGLPELPQIIALNKLDAGDHEFADFITEELRRLTDAKILTISAVSRTGLEQLL
QEIWDVLDYLKEISRNEAPETSVMDLESLHIADE

Sequences:

>Translated_354_residues
MQFIDHAEIEVIAGKGGDGIVAFRREKYVPAGGPAGGNGGWGGSVIFRAEENLQTLLDFRYARTFKAQDGERGGPNNCTG
ASGEDLIVDVPCGTVIYDRETDEEIGDLVFHGQIFCVAKGGKGGLGNKHFLSNKNRAPEYALPGLEGEIKQLRLELKLLA
EVGIIGLPNAGKSTLISALSAARPKIGAYPFTTLIPNLGVVKRPTGDGTVFADIPGLIEGAHQGVGLGHEFLRHIERTKV
LVHLVDLNAEDPIKNYETIQGELEAYGRGLPELPQIIALNKLDAGDHEFADFITEELRRLTDAKILTISAVSRTGLEQLL
QEIWDVLDYLKEISRNEAPETSVMDLESLHIADE
>Mature_354_residues
MQFIDHAEIEVIAGKGGDGIVAFRREKYVPAGGPAGGNGGWGGSVIFRAEENLQTLLDFRYARTFKAQDGERGGPNNCTG
ASGEDLIVDVPCGTVIYDRETDEEIGDLVFHGQIFCVAKGGKGGLGNKHFLSNKNRAPEYALPGLEGEIKQLRLELKLLA
EVGIIGLPNAGKSTLISALSAARPKIGAYPFTTLIPNLGVVKRPTGDGTVFADIPGLIEGAHQGVGLGHEFLRHIERTKV
LVHLVDLNAEDPIKNYETIQGELEAYGRGLPELPQIIALNKLDAGDHEFADFITEELRRLTDAKILTISAVSRTGLEQLL
QEIWDVLDYLKEISRNEAPETSVMDLESLHIADE

Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t

COG id: COG0536

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain

Homologues:

Organism=Homo sapiens, GI24308117, Length=330, Percent_Identity=40.6060606060606, Blast_Score=198, Evalue=6e-51,
Organism=Homo sapiens, GI111955139, Length=335, Percent_Identity=35.2238805970149, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI111955063, Length=273, Percent_Identity=32.6007326007326, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI4758796, Length=173, Percent_Identity=32.9479768786127, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI58761500, Length=130, Percent_Identity=33.8461538461538, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1789574, Length=339, Percent_Identity=48.377581120944, Blast_Score=276, Evalue=1e-75,
Organism=Escherichia coli, GI1787454, Length=109, Percent_Identity=40.3669724770642, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17508313, Length=326, Percent_Identity=38.3435582822086, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17552324, Length=334, Percent_Identity=28.1437125748503, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI71981008, Length=195, Percent_Identity=28.2051282051282, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17555344, Length=126, Percent_Identity=34.9206349206349, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17509631, Length=156, Percent_Identity=32.0512820512821, Blast_Score=68, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6321962, Length=201, Percent_Identity=40.2985074626866, Blast_Score=124, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6319281, Length=245, Percent_Identity=27.7551020408163, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI20129375, Length=333, Percent_Identity=39.6396396396396, Blast_Score=183, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24585318, Length=363, Percent_Identity=36.3636363636364, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI17981711, Length=126, Percent_Identity=36.5079365079365, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356473, Length=194, Percent_Identity=31.9587628865979, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OBG_SYNP2 (B1XN32)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734768.1
- ProteinModelPortal:   B1XN32
- SMR:   B1XN32
- GeneID:   6055032
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1521
- HOGENOM:   HBG716038
- OMA:   LIDYRFN
- ProtClustDB:   PRK12299
- GO:   GO:0005737
- HAMAP:   MF_01454
- InterPro:   IPR014100
- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR006169
- InterPro:   IPR002917
- Gene3D:   G3DSA:2.70.210.12
- PANTHER:   PTHR11702:SF3
- PIRSF:   PIRSF002401
- PRINTS:   PR00326
- TIGRFAMs:   TIGR02729

Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; SSF82051 GTP1_OBG_sub

EC number: NA

Molecular weight: Translated: 38328; Mature: 38328

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00905 GTP1_OBG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFIDHAEIEVIAGKGGDGIVAFRREKYVPAGGPAGGNGGWGGSVIFRAEENLQTLLDFR
CCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHH
YARTFKAQDGERGGPNNCTGASGEDLIVDVPCGTVIYDRETDEEIGDLVFHGQIFCVAKG
HHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHHHEEEECEEEEEEEC
GKGGLGNKHFLSNKNRAPEYALPGLEGEIKQLRLELKLLAEVGIIGLPNAGKSTLISALS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH
AARPKIGAYPFTTLIPNLGVVKRPTGDGTVFADIPGLIEGAHQGVGLGHEFLRHIERTKV
HCCCCCCCCCHHHHCCCCCEEECCCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHEE
LVHLVDLNAEDPIKNYETIQGELEAYGRGLPELPQIIALNKLDAGDHEFADFITEELRRL
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCCHHHHHHHHHHHHHH
TDAKILTISAVSRTGLEQLLQEIWDVLDYLKEISRNEAPETSVMDLESLHIADE
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MQFIDHAEIEVIAGKGGDGIVAFRREKYVPAGGPAGGNGGWGGSVIFRAEENLQTLLDFR
CCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHH
YARTFKAQDGERGGPNNCTGASGEDLIVDVPCGTVIYDRETDEEIGDLVFHGQIFCVAKG
HHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHHHEEEECEEEEEEEC
GKGGLGNKHFLSNKNRAPEYALPGLEGEIKQLRLELKLLAEVGIIGLPNAGKSTLISALS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH
AARPKIGAYPFTTLIPNLGVVKRPTGDGTVFADIPGLIEGAHQGVGLGHEFLRHIERTKV
HCCCCCCCCCHHHHCCCCCEEECCCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHEE
LVHLVDLNAEDPIKNYETIQGELEAYGRGLPELPQIIALNKLDAGDHEFADFITEELRRL
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCCHHHHHHHHHHHHHH
TDAKILTISAVSRTGLEQLLQEIWDVLDYLKEISRNEAPETSVMDLESLHIADE
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA