| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is rfaG [C]
Identifier: 170078125
GI number: 170078125
Start: 1602262
End: 1603470
Strand: Direct
Name: rfaG [C]
Synonym: SYNPCC7002_A1516
Alternate gene names: 170078125
Gene position: 1602262-1603470 (Clockwise)
Preceding gene: 170078124
Following gene: 170078126
Centisome position: 53.27
GC content: 49.05
Gene sequence:
>1209_bases ATGCATCTTGTTATTCTCTTTCACAATATTGGTGGCTACCATGCGGCCCGCTTGAGAGCAACATTTGCAGCCTGTCAGGC CAGAGCATGGCGGTTGACTGCTGTACAAGTCATTGGTCATACCCAAGAACACCCTTGGGGCATGATAGATAATGTCATTA CATTTCCTTTACAAACCCTATTAAATGCAGATTTAGACGAAAAAGAATATCAGCATCGGCTGGTGCGATCACGTTTAGTT ACTTCTCTGAATCAGCTTCAGCCGGATATCGTTGCCATTCCAGGATGGGGTTTTGTTGCATCTCGAACGGCTTTGTCCTG GTGTCACCGCAATCGTATTCCCACCATTTTGATGAGTGAAAGTAAAGCAGACGATGAGCTACGCCAACAGTGGAAAGAAG CTCTCAAATCTTGGCTGTATGTCCGACATTACAATGCGGCACTCGTTGGAAGCCAGCATCATGCAGATTATCTGGTGACC TTAGGAATGTTTCCCCAAAAGATTTTTCTCGGTTATGATGCCGTCGATAACGATTATTTTGAAACCCAGGCTGACCAGGC TCTGCGCAATCCTGCTATGGTTCGCCAGAAATATTCCACAATGCCCAGTCGCCCCTATTTTCTGGCTGTAACTCGATTTA TTCCGCGTAAAAACCTGAGTCGGTTAATTGACGCCTATGCCCTCTACCGCCAACACGTCACCGATGCCTGGGATTTAGTA CTCTGTGGGAGCGGCGTGGAGGCAGCATCCCTCAAGCAGCAGACTCACCAGTTAGAACTCGATGCCTGGATTCACTTTCC GGGATTCATCCCCTACACGGCCATCGGTGACTGGTATGGACTCGCCCATGCGTTTATCCACCCGGCCTTACAAGAACAGT GGGGCTTAGTGGTGAATGAAGCCTGTGCCGCAGGTCTTCCGATTCTGTGTAGTCAGACCGTCGGCGCACGATATGACCTT GTGCATGAGCATCAAAATGGTCTCTTATTTGACCCAACCTCTACTCAGGACATCACCCGCTGTTTACTCTCAATCCACCA GCTTAATGAAGCTGAGCGAGTGCAATGGGGAAATGCCAGTCGGGCGATCGCCTCAACCTACCGTCCAGAATACTTTGCGA AGGGAATGCTTCAGGCGGCTGACACAGCATTGAATCAAACTCAACATCACTCGCTGAAGCAACGTAACCGAGGAAAAGTT GCGAAATGA
Upstream 100 bases:
>100_bases GCTCAACCGACAATATTTTTTCCGACTTCCAAAATTTGCCCCATCTGCTCCTGATCATTTCAAGTCAGGATCATAATCAC ATACGACTTAACATTAACCC
Downstream 100 bases:
>100_bases ATTCTCCCCGCATTCTTTTCATTTCTCCGTATCTTAGCGTTACCTATGGCGGCACGTCCAAGAGTGTGAGTGACCTTGCC GATGCTCTGGGTCGGTCTGG
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family; Hexosyltransferase; Glycosyl Transferase; A-Glycosyltransferase; 1 2-Diacylglycerol 3-Glucosyltransferase; Glycosyl Transferase Group 1 Protein; Mannosyltransferase
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MHLVILFHNIGGYHAARLRATFAACQARAWRLTAVQVIGHTQEHPWGMIDNVITFPLQTLLNADLDEKEYQHRLVRSRLV TSLNQLQPDIVAIPGWGFVASRTALSWCHRNRIPTILMSESKADDELRQQWKEALKSWLYVRHYNAALVGSQHHADYLVT LGMFPQKIFLGYDAVDNDYFETQADQALRNPAMVRQKYSTMPSRPYFLAVTRFIPRKNLSRLIDAYALYRQHVTDAWDLV LCGSGVEAASLKQQTHQLELDAWIHFPGFIPYTAIGDWYGLAHAFIHPALQEQWGLVVNEACAAGLPILCSQTVGARYDL VHEHQNGLLFDPTSTQDITRCLLSIHQLNEAERVQWGNASRAIASTYRPEYFAKGMLQAADTALNQTQHHSLKQRNRGKV AK
Sequences:
>Translated_402_residues MHLVILFHNIGGYHAARLRATFAACQARAWRLTAVQVIGHTQEHPWGMIDNVITFPLQTLLNADLDEKEYQHRLVRSRLV TSLNQLQPDIVAIPGWGFVASRTALSWCHRNRIPTILMSESKADDELRQQWKEALKSWLYVRHYNAALVGSQHHADYLVT LGMFPQKIFLGYDAVDNDYFETQADQALRNPAMVRQKYSTMPSRPYFLAVTRFIPRKNLSRLIDAYALYRQHVTDAWDLV LCGSGVEAASLKQQTHQLELDAWIHFPGFIPYTAIGDWYGLAHAFIHPALQEQWGLVVNEACAAGLPILCSQTVGARYDL VHEHQNGLLFDPTSTQDITRCLLSIHQLNEAERVQWGNASRAIASTYRPEYFAKGMLQAADTALNQTQHHSLKQRNRGKV AK >Mature_402_residues MHLVILFHNIGGYHAARLRATFAACQARAWRLTAVQVIGHTQEHPWGMIDNVITFPLQTLLNADLDEKEYQHRLVRSRLV TSLNQLQPDIVAIPGWGFVASRTALSWCHRNRIPTILMSESKADDELRQQWKEALKSWLYVRHYNAALVGSQHHADYLVT LGMFPQKIFLGYDAVDNDYFETQADQALRNPAMVRQKYSTMPSRPYFLAVTRFIPRKNLSRLIDAYALYRQHVTDAWDLV LCGSGVEAASLKQQTHQLELDAWIHFPGFIPYTAIGDWYGLAHAFIHPALQEQWGLVVNEACAAGLPILCSQTVGARYDL VHEHQNGLLFDPTSTQDITRCLLSIHQLNEAERVQWGNASRAIASTYRPEYFAKGMLQAADTALNQTQHHSLKQRNRGKV AK
Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45748; Mature: 45748
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLVILFHNIGGYHAARLRATFAACQARAWRLTAVQVIGHTQEHPWGMIDNVITFPLQTL CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LNADLDEKEYQHRLVRSRLVTSLNQLQPDIVAIPGWGFVASRTALSWCHRNRIPTILMSE HCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECC SKADDELRQQWKEALKSWLYVRHYNAALVGSQHHADYLVTLGMFPQKIFLGYDAVDNDYF CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCCCHHHHCCCCCCCCCHH ETQADQALRNPAMVRQKYSTMPSRPYFLAVTRFIPRKNLSRLIDAYALYRQHVTDAWDLV HHHHHHHHCCHHHHHHHHHCCCCCCCEEHHHHHHCHHHHHHHHHHHHHHHHHHCCHHEEE LCGSGVEAASLKQQTHQLELDAWIHFPGFIPYTAIGDWYGLAHAFIHPALQEQWGLVVNE EECCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH ACAAGLPILCSQTVGARYDLVHEHQNGLLFDPTSTQDITRCLLSIHQLNEAERVQWGNAS HHHCCCCHHHCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHCCCCCH RAIASTYRPEYFAKGMLQAADTALNQTQHHSLKQRNRGKVAK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHLVILFHNIGGYHAARLRATFAACQARAWRLTAVQVIGHTQEHPWGMIDNVITFPLQTL CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LNADLDEKEYQHRLVRSRLVTSLNQLQPDIVAIPGWGFVASRTALSWCHRNRIPTILMSE HCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECC SKADDELRQQWKEALKSWLYVRHYNAALVGSQHHADYLVTLGMFPQKIFLGYDAVDNDYF CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCCCHHHHCCCCCCCCCHH ETQADQALRNPAMVRQKYSTMPSRPYFLAVTRFIPRKNLSRLIDAYALYRQHVTDAWDLV HHHHHHHHCCHHHHHHHHHCCCCCCCEEHHHHHHCHHHHHHHHHHHHHHHHHHCCHHEEE LCGSGVEAASLKQQTHQLELDAWIHFPGFIPYTAIGDWYGLAHAFIHPALQEQWGLVVNE EECCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH ACAAGLPILCSQTVGARYDLVHEHQNGLLFDPTSTQDITRCLLSIHQLNEAERVQWGNAS HHHCCCCHHHCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHCCCCCH RAIASTYRPEYFAKGMLQAADTALNQTQHHSLKQRNRGKVAK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA