| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078124
Identifier: 170078124
GI number: 170078124
Start: 1600957
End: 1602237
Strand: Direct
Name: 170078124
Synonym: SYNPCC7002_A1515
Alternate gene names: NA
Gene position: 1600957-1602237 (Clockwise)
Preceding gene: 170078123
Following gene: 170078125
Centisome position: 53.22
GC content: 44.96
Gene sequence:
>1281_bases GTGGTGATCGGCGTTTTCTGGCTCCTTAAACGCAATGATGAAATCCCCTTGCTAATAAGTAGCTTTTTGTTGTATTGCGG ATCATATCGATATTGGGCTGTCACTACAGGTCTAAGTCGGGGTTGGGTACGACTGAGCAACTTTGGTTTTAGTCCTATTA ATGAGCAAAAAGCCCTCATCGCTTTGTCATTTATTACCTTTGGTGAGTTTTGCCTGCTCGGATTTTACATTTTATTTCAG CGACAATACCTGCCCGCTTGGAACATCGGTGCAACGCCATTTCCACTTTCTCCCAAGTGGAGCCAGCGAATTTTGTGGGC AGGTGGATTTTTCATCAGCATGACCTTGATTATCAGTTCTCAAATTATTACTCTCACGCGAGCAGGGCGATCACTCGGTT TTCAGATTAGCGCTTATCTTTACCTATTTCCGCTAGCATTGATTGGCACTGCTACCTTAATTTTATGTGTGTGGAAGTTC GGCGGATTTCGCACTCTCTTTACCAAGATCTTTGCTATTCTTACTCTCATAAGCGTGGCACAATTGACTTTTGGTCCATC CGGGCGATTTCAATTTTTAGGTTGGCTAATTGCTGCTGGAGTGATTATTTCCGCAAATTATCGGCCTGTGCGGCGGCTCT GGGTGTTATCGATATTAGCAGTAGTGGCAATCACCCTCTTCGCTACAGCTGGAGCGCTAAGAAGTCCCACCATCAACCCT GCAAATCTGAACCAAGTAGCATGGGAACGAGCCTTTAGTGCAGAAGATGCAAACATGCTTGATGGCTTTGTCTTGCTTCA GGAGGTTTATCCTGATCGTTTACCTTATAGCCTCGGCATGGAACATATCGAAATTCTCCTGCGCCCCATTCCCCGCGCTA TATGGCCCAACAAACCTGTTGGTGGCTACATGAATAAACTAGGCCTCATTGATGAAAATACAGGCTTTAACCTTGGGATC TCGCCCACATTGCTAGGATCTTTCTACGCGGAGGGATGGCTTATTGGTATTGTGATATTTAGTTTTCTTTATGGCTTTTG TATTGCGAAAATTGTTCACTTCAGCGTTCAGATTCATCCTTTTGCTGGAGTATTACTCAGGGCGATGTTATGTGCTGCAT TAGTTCCCCTTCTCAGAGGGGGCGATTTACCGGGTGTCTATGCCTGGATCGGTATGGCGTTTTGGCCATGTTTTTTCATA CTCTGGCTCAACCGACAATATTTTTTCCGACTTCCAAAATTTGCCCCATCTGCTCCTGATCATTTCAAGTCAGGATCATA A
Upstream 100 bases:
>100_bases TATGTGACTTTAGCCTAAACCAACTGCATCACCGACTCCAAACCCTTTTCCTATGACATTCTTTGAATTTCCAGAGCTGT TTATCACTCAGATTATCCTA
Downstream 100 bases:
>100_bases TCACATACGACTTAACATTAACCCATGCATCTTGTTATTCTCTTTCACAATATTGGTGGCTACCATGCGGCCCGCTTGAG AGCAACATTTGCAGCCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MVIGVFWLLKRNDEIPLLISSFLLYCGSYRYWAVTTGLSRGWVRLSNFGFSPINEQKALIALSFITFGEFCLLGFYILFQ RQYLPAWNIGATPFPLSPKWSQRILWAGGFFISMTLIISSQIITLTRAGRSLGFQISAYLYLFPLALIGTATLILCVWKF GGFRTLFTKIFAILTLISVAQLTFGPSGRFQFLGWLIAAGVIISANYRPVRRLWVLSILAVVAITLFATAGALRSPTINP ANLNQVAWERAFSAEDANMLDGFVLLQEVYPDRLPYSLGMEHIEILLRPIPRAIWPNKPVGGYMNKLGLIDENTGFNLGI SPTLLGSFYAEGWLIGIVIFSFLYGFCIAKIVHFSVQIHPFAGVLLRAMLCAALVPLLRGGDLPGVYAWIGMAFWPCFFI LWLNRQYFFRLPKFAPSAPDHFKSGS
Sequences:
>Translated_426_residues MVIGVFWLLKRNDEIPLLISSFLLYCGSYRYWAVTTGLSRGWVRLSNFGFSPINEQKALIALSFITFGEFCLLGFYILFQ RQYLPAWNIGATPFPLSPKWSQRILWAGGFFISMTLIISSQIITLTRAGRSLGFQISAYLYLFPLALIGTATLILCVWKF GGFRTLFTKIFAILTLISVAQLTFGPSGRFQFLGWLIAAGVIISANYRPVRRLWVLSILAVVAITLFATAGALRSPTINP ANLNQVAWERAFSAEDANMLDGFVLLQEVYPDRLPYSLGMEHIEILLRPIPRAIWPNKPVGGYMNKLGLIDENTGFNLGI SPTLLGSFYAEGWLIGIVIFSFLYGFCIAKIVHFSVQIHPFAGVLLRAMLCAALVPLLRGGDLPGVYAWIGMAFWPCFFI LWLNRQYFFRLPKFAPSAPDHFKSGS >Mature_426_residues MVIGVFWLLKRNDEIPLLISSFLLYCGSYRYWAVTTGLSRGWVRLSNFGFSPINEQKALIALSFITFGEFCLLGFYILFQ RQYLPAWNIGATPFPLSPKWSQRILWAGGFFISMTLIISSQIITLTRAGRSLGFQISAYLYLFPLALIGTATLILCVWKF GGFRTLFTKIFAILTLISVAQLTFGPSGRFQFLGWLIAAGVIISANYRPVRRLWVLSILAVVAITLFATAGALRSPTINP ANLNQVAWERAFSAEDANMLDGFVLLQEVYPDRLPYSLGMEHIEILLRPIPRAIWPNKPVGGYMNKLGLIDENTGFNLGI SPTLLGSFYAEGWLIGIVIFSFLYGFCIAKIVHFSVQIHPFAGVLLRAMLCAALVPLLRGGDLPGVYAWIGMAFWPCFFI LWLNRQYFFRLPKFAPSAPDHFKSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47754; Mature: 47754
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIGVFWLLKRNDEIPLLISSFLLYCGSYRYWAVTTGLSRGWVRLSNFGFSPINEQKALI CEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHH ALSFITFGEFCLLGFYILFQRQYLPAWNIGATPFPLSPKWSQRILWAGGFFISMTLIISS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHH QIITLTRAGRSLGFQISAYLYLFPLALIGTATLILCVWKFGGFRTLFTKIFAILTLISVA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH QLTFGPSGRFQFLGWLIAAGVIISANYRPVRRLWVLSILAVVAITLFATAGALRSPTINP HHHCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ANLNQVAWERAFSAEDANMLDGFVLLQEVYPDRLPYSLGMEHIEILLRPIPRAIWPNKPV CCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCC GGYMNKLGLIDENTGFNLGISPTLLGSFYAEGWLIGIVIFSFLYGFCIAKIVHFSVQIHP CHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECH FAGVLLRAMLCAALVPLLRGGDLPGVYAWIGMAFWPCFFILWLNRQYFFRLPKFAPSAPD HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC HFKSGS CCCCCC >Mature Secondary Structure MVIGVFWLLKRNDEIPLLISSFLLYCGSYRYWAVTTGLSRGWVRLSNFGFSPINEQKALI CEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHH ALSFITFGEFCLLGFYILFQRQYLPAWNIGATPFPLSPKWSQRILWAGGFFISMTLIISS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHH QIITLTRAGRSLGFQISAYLYLFPLALIGTATLILCVWKFGGFRTLFTKIFAILTLISVA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH QLTFGPSGRFQFLGWLIAAGVIISANYRPVRRLWVLSILAVVAITLFATAGALRSPTINP HHHCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ANLNQVAWERAFSAEDANMLDGFVLLQEVYPDRLPYSLGMEHIEILLRPIPRAIWPNKPV CCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCC GGYMNKLGLIDENTGFNLGISPTLLGSFYAEGWLIGIVIFSFLYGFCIAKIVHFSVQIHP CHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECH FAGVLLRAMLCAALVPLLRGGDLPGVYAWIGMAFWPCFFILWLNRQYFFRLPKFAPSAPD HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC HFKSGS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA