Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078098

Identifier: 170078098

GI number: 170078098

Start: 1568588

End: 1571512

Strand: Direct

Name: 170078098

Synonym: SYNPCC7002_A1489

Alternate gene names: NA

Gene position: 1568588-1571512 (Clockwise)

Preceding gene: 170078097

Following gene: 170078103

Centisome position: 52.15

GC content: 38.77

Gene sequence:

>2925_bases
GTGGTCTGCTCTAGATCAAAAATGACAATTAAACAGTCAGTTGTGCCACTTTTAGTCACTTTTTACTTGGGATATTTAGG
AACAAATCAAACCTTAAGTATCGCCGCAAATTTCCCCTTAGAGACAGACAGGCTATCTTATGAGAATGGACAGAGTGACC
AAGACAACCTTCAAAAAAAACTATCTAGTTATGAAGCAATAAAAGTTATTGCACAATCCCCTTTAAACTCGGAATTATTT
AATGATAGTCAAATCAGTCCAGAACAAATAGATCTCGAAGAGGGGATTCTACCAGAGTTTCCGATTCGCCAAGACTTAGA
AGATCAAAATACAGAAGAATTAGAACAAGATTTTAAAGAAGCAGCAAGTGAATCTGAAAATCTTGATAGGAGAAAAGAAT
TAATCAGACGGTTTATGTTACGTTCTCTCGCGATTAGCTCACAGAGATATCCATTTCTCATCGATCCAACTGATAATATA
ACTTTTGAACCTCTGCAATTTAATCCTTTTGAGCTAGAAAGTTATGGTCAATTTGATCTTCAAATTGACAACAGTGATTT
TGTAATTGATAAAATCACTTATGGTCTCTTTCCTAAGGAAAATCAGTTCTATTGGGTTCTCCCCAATAATAGAATTGTAT
TTGAAACCCAAGGTTGGGTTGGTGGTCTTCAGTATCAGGGACAAACCACAGATATCCGAGAAATACGTGACGCTCGTCAG
GAAGTTTCATTTTGGGGATTACAGGCTGTTTGGAATATTCCGAGAATACGAGCTGATGGATCTAGCACGACGGATATTCT
ATCTATTGAAGAACTACGTCAGGCAGATATCATAACATTTGCTGGACAAGTCACTTCCAATGATGGTTTTCCCGGTCAAG
TGATTATTAATAGCGGTATTGATCTTAATGATCCAAGCATTACTGATATTAGTGAGCTTTTAAATTCTCCACCAGGCTTA
GGAGAAACATCAACCAATTCTACCCAGGGAGGTAAAAATCTTTTCGAAGGATTAGAAGATGACCGGACACCAGTTATTTT
GCAGGCATTTCCCACTAGCGACTTAAGTAAGTTATTGGATAACAATGTTGATCTCCGTGAGGGAGAGTTTATTCCTAGGG
AAAATTTAACGAATACGGGAATTGTTTTTGGAGATCTGACCAAAGGCGACAGAATTGAAATTGATCTTGATTTTACTTCA
GTGCCAGGTGTTAAGTTTGCTCGTCCCTTTGATGACTTCAAAAACCTTGATCTTTTAAATGTTTTAGTCAACCCAGAGCT
AACCGGAAAAGAATATGAACGACGTTATCTAAATTCACTACTCTGGAACGGGATTCGTCGTAGTCCCAGAATTGATAATG
CTAGAGTCACTACAGAAACAACCAGTTGGTATCAAGGATATCTAAGCCGTCCTCACAAGCGCGCAGCCATTACGTACCAT
GCTGAGGAGCCTTCTGCTACTTTTACAGAAATTTTTGCTAACCCTGGCCTTGGTTTCACAGTAGGCAGTTGGGGAGATAA
ATTTGATGGGATTCAGTTTCTTAATATTACAACTGGTTTGCTTTTAGGCGGAATTTTTGAAGCAGTTGATGAGGATGGTG
TTCAAGATTCATTAAATACAGCAAAAGAACTCTTCGAACAGGGTAAGCTCACTTCTGGTTTAAATACGAAAGCAACATCT
CAAGAATTAAGAGAGCTTGGTTTACGTCTGGATAAAAGTCTTTTATATGCTGATTTTAATACTAATATCGCACAAACATC
GGGAAGATTAACTTCTGATAGTTATATCACACCTAAAACATCAGAGTTATGGCAGCTTCGTACCGGATTGTTCCCGCGTC
GTGTTCAAATAATCGAAGAACAACAACTAAGCTCAACTGCAGGACAACCTTTCTTTTCCACAGTTGATATTTCACAATTT
GGGCAACTGACTTTTGTCAGTATTCCTTCTTCAGAAGATCGTCTATTTGAAACACCCGAAGAAACAGAAAATGTCGTTTT
TTCACCTAACTTTTCTCCGGGATCGCCACGTACAACATTTGGCACAGAAGTTCTTTTGACAACACCTAGTGGACAACGTT
TTGTACAGCGCTTTTCAACGGATTCCACTCAATTTAGTAGTTTGCCTAATTCGATTAAAAGCTCTGACATTGCGTTTGAT
CGGATTAATATTGCCCAAATTGATCAAGTTCAATCTCTTACTTCAATTTATGAAGGTATCGCTTATGTTCCAGCTATTGA
GTTAGCGTACGCAGGTTCTTCTGATCTTTGGTATTACAATCTTAATGCAGGCATCTGGGCTACGTTTAATAGTCAAGTGG
CTCCTGGTGTCACAGAAAAAGTTATTGATAATAACGAGCCAGCAATTGGTGCTTATTTAAAGGGTTTTGCAAACGCGATT
CAAGAAATTCCTATTTTGAATGAAAATTCAATGGCCATGGGAGTTAGAACCTATGGCCCGACATTTCGTTTCAATACAGA
TACCCAAAGCCGGTTTAATTTGACCTTGGGTTACGAATATGGTGAACGCCGTCCTGGAATGGGTTGGACTCTGCGACCAA
CCTTATTTTATTCTCAAGGTACTAGTACTAATGAAGATGAAAACCTACGTAACTGGGTCGGACTGCTTGATGGACAAATT
GGCCTACAGTCAGGTTTGAGTATTATTAACCGCTTAGAGTTTGGGGAACAGTTATTCACAAGTTTAACGGCACGCCAGCG
GCTTAATCCCAATATTTCAGTTGGTATTTATACACAAAACTTTGATAATGAGATTTCTGGTTTAGGTCAGCGGACAGAAG
GCAGTTCAATAGGATTAATCTTGCGCTATGACTCGATAAAAAGCCGCACATCTTTTTATGAAGGGCGAATTGGGACGAGT
GATACTGGCTTTGATTTTGAATTTCGTAGCCGCTTTAGTTTTTAA

Upstream 100 bases:

>100_bases
TTTGCAACAATTGGTAATATATGTGGTCTAAACGATAAAGAAGTGGTAAAAAGCGTAAGGAAATCCATAATTATGTATCC
ACAGCTCTTTATGGTTGCTG

Downstream 100 bases:

>100_bases
CCAAAGAAGAAAAGAGGAGAGATGATTTAGTCGTTATCTCTCCTTTGCAAATCAGGAATTAAGAATGAATAAAATTCTTT
GAAAAGCTCGAATGACAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 974; Mature: 974

Protein sequence:

>974_residues
MVCSRSKMTIKQSVVPLLVTFYLGYLGTNQTLSIAANFPLETDRLSYENGQSDQDNLQKKLSSYEAIKVIAQSPLNSELF
NDSQISPEQIDLEEGILPEFPIRQDLEDQNTEELEQDFKEAASESENLDRRKELIRRFMLRSLAISSQRYPFLIDPTDNI
TFEPLQFNPFELESYGQFDLQIDNSDFVIDKITYGLFPKENQFYWVLPNNRIVFETQGWVGGLQYQGQTTDIREIRDARQ
EVSFWGLQAVWNIPRIRADGSSTTDILSIEELRQADIITFAGQVTSNDGFPGQVIINSGIDLNDPSITDISELLNSPPGL
GETSTNSTQGGKNLFEGLEDDRTPVILQAFPTSDLSKLLDNNVDLREGEFIPRENLTNTGIVFGDLTKGDRIEIDLDFTS
VPGVKFARPFDDFKNLDLLNVLVNPELTGKEYERRYLNSLLWNGIRRSPRIDNARVTTETTSWYQGYLSRPHKRAAITYH
AEEPSATFTEIFANPGLGFTVGSWGDKFDGIQFLNITTGLLLGGIFEAVDEDGVQDSLNTAKELFEQGKLTSGLNTKATS
QELRELGLRLDKSLLYADFNTNIAQTSGRLTSDSYITPKTSELWQLRTGLFPRRVQIIEEQQLSSTAGQPFFSTVDISQF
GQLTFVSIPSSEDRLFETPEETENVVFSPNFSPGSPRTTFGTEVLLTTPSGQRFVQRFSTDSTQFSSLPNSIKSSDIAFD
RINIAQIDQVQSLTSIYEGIAYVPAIELAYAGSSDLWYYNLNAGIWATFNSQVAPGVTEKVIDNNEPAIGAYLKGFANAI
QEIPILNENSMAMGVRTYGPTFRFNTDTQSRFNLTLGYEYGERRPGMGWTLRPTLFYSQGTSTNEDENLRNWVGLLDGQI
GLQSGLSIINRLEFGEQLFTSLTARQRLNPNISVGIYTQNFDNEISGLGQRTEGSSIGLILRYDSIKSRTSFYEGRIGTS
DTGFDFEFRSRFSF

Sequences:

>Translated_974_residues
MVCSRSKMTIKQSVVPLLVTFYLGYLGTNQTLSIAANFPLETDRLSYENGQSDQDNLQKKLSSYEAIKVIAQSPLNSELF
NDSQISPEQIDLEEGILPEFPIRQDLEDQNTEELEQDFKEAASESENLDRRKELIRRFMLRSLAISSQRYPFLIDPTDNI
TFEPLQFNPFELESYGQFDLQIDNSDFVIDKITYGLFPKENQFYWVLPNNRIVFETQGWVGGLQYQGQTTDIREIRDARQ
EVSFWGLQAVWNIPRIRADGSSTTDILSIEELRQADIITFAGQVTSNDGFPGQVIINSGIDLNDPSITDISELLNSPPGL
GETSTNSTQGGKNLFEGLEDDRTPVILQAFPTSDLSKLLDNNVDLREGEFIPRENLTNTGIVFGDLTKGDRIEIDLDFTS
VPGVKFARPFDDFKNLDLLNVLVNPELTGKEYERRYLNSLLWNGIRRSPRIDNARVTTETTSWYQGYLSRPHKRAAITYH
AEEPSATFTEIFANPGLGFTVGSWGDKFDGIQFLNITTGLLLGGIFEAVDEDGVQDSLNTAKELFEQGKLTSGLNTKATS
QELRELGLRLDKSLLYADFNTNIAQTSGRLTSDSYITPKTSELWQLRTGLFPRRVQIIEEQQLSSTAGQPFFSTVDISQF
GQLTFVSIPSSEDRLFETPEETENVVFSPNFSPGSPRTTFGTEVLLTTPSGQRFVQRFSTDSTQFSSLPNSIKSSDIAFD
RINIAQIDQVQSLTSIYEGIAYVPAIELAYAGSSDLWYYNLNAGIWATFNSQVAPGVTEKVIDNNEPAIGAYLKGFANAI
QEIPILNENSMAMGVRTYGPTFRFNTDTQSRFNLTLGYEYGERRPGMGWTLRPTLFYSQGTSTNEDENLRNWVGLLDGQI
GLQSGLSIINRLEFGEQLFTSLTARQRLNPNISVGIYTQNFDNEISGLGQRTEGSSIGLILRYDSIKSRTSFYEGRIGTS
DTGFDFEFRSRFSF
>Mature_974_residues
MVCSRSKMTIKQSVVPLLVTFYLGYLGTNQTLSIAANFPLETDRLSYENGQSDQDNLQKKLSSYEAIKVIAQSPLNSELF
NDSQISPEQIDLEEGILPEFPIRQDLEDQNTEELEQDFKEAASESENLDRRKELIRRFMLRSLAISSQRYPFLIDPTDNI
TFEPLQFNPFELESYGQFDLQIDNSDFVIDKITYGLFPKENQFYWVLPNNRIVFETQGWVGGLQYQGQTTDIREIRDARQ
EVSFWGLQAVWNIPRIRADGSSTTDILSIEELRQADIITFAGQVTSNDGFPGQVIINSGIDLNDPSITDISELLNSPPGL
GETSTNSTQGGKNLFEGLEDDRTPVILQAFPTSDLSKLLDNNVDLREGEFIPRENLTNTGIVFGDLTKGDRIEIDLDFTS
VPGVKFARPFDDFKNLDLLNVLVNPELTGKEYERRYLNSLLWNGIRRSPRIDNARVTTETTSWYQGYLSRPHKRAAITYH
AEEPSATFTEIFANPGLGFTVGSWGDKFDGIQFLNITTGLLLGGIFEAVDEDGVQDSLNTAKELFEQGKLTSGLNTKATS
QELRELGLRLDKSLLYADFNTNIAQTSGRLTSDSYITPKTSELWQLRTGLFPRRVQIIEEQQLSSTAGQPFFSTVDISQF
GQLTFVSIPSSEDRLFETPEETENVVFSPNFSPGSPRTTFGTEVLLTTPSGQRFVQRFSTDSTQFSSLPNSIKSSDIAFD
RINIAQIDQVQSLTSIYEGIAYVPAIELAYAGSSDLWYYNLNAGIWATFNSQVAPGVTEKVIDNNEPAIGAYLKGFANAI
QEIPILNENSMAMGVRTYGPTFRFNTDTQSRFNLTLGYEYGERRPGMGWTLRPTLFYSQGTSTNEDENLRNWVGLLDGQI
GLQSGLSIINRLEFGEQLFTSLTARQRLNPNISVGIYTQNFDNEISGLGQRTEGSSIGLILRYDSIKSRTSFYEGRIGTS
DTGFDFEFRSRFSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 109406; Mature: 109406

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCSRSKMTIKQSVVPLLVTFYLGYLGTNQTLSIAANFPLETDRLSYENGQSDQDNLQKK
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
LSSYEAIKVIAQSPLNSELFNDSQISPEQIDLEEGILPEFPIRQDLEDQNTEELEQDFKE
HHHHHHHHHHHCCCCCHHHCCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
AASESENLDRRKELIRRFMLRSLAISSQRYPFLIDPTDNITFEPLQFNPFELESYGQFDL
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEECCCCCCCEECCCCCEEEE
QIDNSDFVIDKITYGLFPKENQFYWVLPNNRIVFETQGWVGGLQYQGQTTDIREIRDARQ
EECCCCEEEEEHEECCCCCCCCEEEEECCCEEEEEECCCCCCEEECCCCCHHHHHHHHHH
EVSFWGLQAVWNIPRIRADGSSTTDILSIEELRQADIITFAGQVTSNDGFPGQVIINSGI
HHHHHHHHHHHCCCEEECCCCCCCCEEEHHHHHHCCEEEEECEEECCCCCCCEEEEECCC
DLNDPSITDISELLNSPPGLGETSTNSTQGGKNLFEGLEDDRTPVILQAFPTSDLSKLLD
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCHHHHHHHC
NNVDLREGEFIPRENLTNTGIVFGDLTKGDRIEIDLDFTSVPGVKFARPFDDFKNLDLLN
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHCCCEEEE
VLVNPELTGKEYERRYLNSLLWNGIRRSPRIDNARVTTETTSWYQGYLSRPHKRAAITYH
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHCCCCCCEEEEEE
AEEPSATFTEIFANPGLGFTVGSWGDKFDGIQFLNITTGLLLGGIFEAVDEDGVQDSLNT
CCCCCCHHHHHHCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHH
AKELFEQGKLTSGLNTKATSQELRELGLRLDKSLLYADFNTNIAQTSGRLTSDSYITPKT
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHCCCCCCCCCCCCCCC
SELWQLRTGLFPRRVQIIEEQQLSSTAGQPFFSTVDISQFGQLTFVSIPSSEDRLFETPE
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCEEEEECCCCCCCCCCCCC
ETENVVFSPNFSPGSPRTTFGTEVLLTTPSGQRFVQRFSTDSTQFSSLPNSIKSSDIAFD
CCCCEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHCCCHHHCCCCEEE
RINIAQIDQVQSLTSIYEGIAYVPAIELAYAGSSDLWYYNLNAGIWATFNSQVAPGVTEK
ECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCHHH
VIDNNEPAIGAYLKGFANAIQEIPILNENSMAMGVRTYGPTFRFNTDTQSRFNLTLGYEY
HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEEEECC
GERRPGMGWTLRPTLFYSQGTSTNEDENLRNWVGLLDGQIGLQSGLSIINRLEFGEQLFT
CCCCCCCCEEECCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SLTARQRLNPNISVGIYTQNFDNEISGLGQRTEGSSIGLILRYDSIKSRTSFYEGRIGTS
HHHHHHHCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCC
DTGFDFEFRSRFSF
CCCCCCHHHCCCCC
>Mature Secondary Structure
MVCSRSKMTIKQSVVPLLVTFYLGYLGTNQTLSIAANFPLETDRLSYENGQSDQDNLQKK
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
LSSYEAIKVIAQSPLNSELFNDSQISPEQIDLEEGILPEFPIRQDLEDQNTEELEQDFKE
HHHHHHHHHHHCCCCCHHHCCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
AASESENLDRRKELIRRFMLRSLAISSQRYPFLIDPTDNITFEPLQFNPFELESYGQFDL
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEECCCCCCCEECCCCCEEEE
QIDNSDFVIDKITYGLFPKENQFYWVLPNNRIVFETQGWVGGLQYQGQTTDIREIRDARQ
EECCCCEEEEEHEECCCCCCCCEEEEECCCEEEEEECCCCCCEEECCCCCHHHHHHHHHH
EVSFWGLQAVWNIPRIRADGSSTTDILSIEELRQADIITFAGQVTSNDGFPGQVIINSGI
HHHHHHHHHHHCCCEEECCCCCCCCEEEHHHHHHCCEEEEECEEECCCCCCCEEEEECCC
DLNDPSITDISELLNSPPGLGETSTNSTQGGKNLFEGLEDDRTPVILQAFPTSDLSKLLD
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCHHHHHHHC
NNVDLREGEFIPRENLTNTGIVFGDLTKGDRIEIDLDFTSVPGVKFARPFDDFKNLDLLN
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHCCCEEEE
VLVNPELTGKEYERRYLNSLLWNGIRRSPRIDNARVTTETTSWYQGYLSRPHKRAAITYH
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHCCCCCCEEEEEE
AEEPSATFTEIFANPGLGFTVGSWGDKFDGIQFLNITTGLLLGGIFEAVDEDGVQDSLNT
CCCCCCHHHHHHCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHH
AKELFEQGKLTSGLNTKATSQELRELGLRLDKSLLYADFNTNIAQTSGRLTSDSYITPKT
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHCCCCCCCCCCCCCCC
SELWQLRTGLFPRRVQIIEEQQLSSTAGQPFFSTVDISQFGQLTFVSIPSSEDRLFETPE
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCEEEEECCCCCCCCCCCCC
ETENVVFSPNFSPGSPRTTFGTEVLLTTPSGQRFVQRFSTDSTQFSSLPNSIKSSDIAFD
CCCCEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHCCCHHHCCCCEEE
RINIAQIDQVQSLTSIYEGIAYVPAIELAYAGSSDLWYYNLNAGIWATFNSQVAPGVTEK
ECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCHHH
VIDNNEPAIGAYLKGFANAIQEIPILNENSMAMGVRTYGPTFRFNTDTQSRFNLTLGYEY
HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEEEECC
GERRPGMGWTLRPTLFYSQGTSTNEDENLRNWVGLLDGQIGLQSGLSIINRLEFGEQLFT
CCCCCCCCEEECCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SLTARQRLNPNISVGIYTQNFDNEISGLGQRTEGSSIGLILRYDSIKSRTSFYEGRIGTS
HHHHHHHCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCC
DTGFDFEFRSRFSF
CCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA