Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078087

Identifier: 170078087

GI number: 170078087

Start: 1555611

End: 1555910

Strand: Reverse

Name: 170078087

Synonym: SYNPCC7002_A1478

Alternate gene names: NA

Gene position: 1555910-1555611 (Counterclockwise)

Preceding gene: 170078090

Following gene: 170078083

Centisome position: 51.72

GC content: 47.0

Gene sequence:

>300_bases
ATGAATTTACCCAGCAACAAAGACGAGCTAGTCACCCAGCTACATCAGCAAATTGACGAAGCCTCTCGGAATATCGATGA
ATTAAAGCTCCAAGCTAATCTTGCCAAGGCGGAAGCGAGATCTGCTTTTGAGGCGAACATTGCCACCCTCGAATCCCAAA
AAGTTAAGTTGCAAGAACAGGTCAATCACCTAAAACACAGCACAGATAATGCCTGGCAAGAACTGGCTGAAGGCTGTCAG
AAGTCCTGGCATGAGTTTCAAAGTGCGGTGCAAAAGGCGATCGCCCAGTTCAAGGCATAA

Upstream 100 bases:

>100_bases
GCTATCTGACCACGACGGAACAAATTTCAGCAAATAAGCGGACTTTGTTTACCCAGCCTTGATCAACAATTGAAGCGAAG
TCGAACAAGAGGAGAAAACG

Downstream 100 bases:

>100_bases
CTCTCCATATTCATTGAGAACGCCTTTTAATCTCTCCCATAAAAAACTCTAAAACCCCATCCCACCGGAGTTTTAGAGTT
GATGATCACGATTGCTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNLPSNKDELVTQLHQQIDEASRNIDELKLQANLAKAEARSAFEANIATLESQKVKLQEQVNHLKHSTDNAWQELAEGCQ
KSWHEFQSAVQKAIAQFKA

Sequences:

>Translated_99_residues
MNLPSNKDELVTQLHQQIDEASRNIDELKLQANLAKAEARSAFEANIATLESQKVKLQEQVNHLKHSTDNAWQELAEGCQ
KSWHEFQSAVQKAIAQFKA
>Mature_99_residues
MNLPSNKDELVTQLHQQIDEASRNIDELKLQANLAKAEARSAFEANIATLESQKVKLQEQVNHLKHSTDNAWQELAEGCQ
KSWHEFQSAVQKAIAQFKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11212; Mature: 11212

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPSNKDELVTQLHQQIDEASRNIDELKLQANLAKAEARSAFEANIATLESQKVKLQEQ
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNHLKHSTDNAWQELAEGCQKSWHEFQSAVQKAIAQFKA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLPSNKDELVTQLHQQIDEASRNIDELKLQANLAKAEARSAFEANIATLESQKVKLQEQ
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNHLKHSTDNAWQELAEGCQKSWHEFQSAVQKAIAQFKA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA