| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078072
Identifier: 170078072
GI number: 170078072
Start: 1537931
End: 1538929
Strand: Reverse
Name: 170078072
Synonym: SYNPCC7002_A1463
Alternate gene names: NA
Gene position: 1538929-1537931 (Counterclockwise)
Preceding gene: 170078073
Following gene: 170078070
Centisome position: 51.16
GC content: 49.95
Gene sequence:
>999_bases ATGGTTCAAACCCCAACCCAAACCACCATCCCCGCTTTTCAGAAAACCTTGGGTCAACCCCTAAGCAAAACCCCTATCAA CACTCTCCAAATTAACCTCGGCAAAAAATGTAACCTCGCCTGCACCCATTGCCATGTTGAGGCCAGCCCGAAGCGCACCG AGGCACTCAGCCCAGAAATTTGTGCCCAATTGATCCAACTGATTCGCACCTTCCCCCAAATTCAAACGGTGGATCTCACG GGGGGAGCGCCGGAAATGCACGATGGGTTTAGGCAACTGGTGGCTGCAGCACGGGAAACAGGGAAAGATGTGATTGTGCG CTCAAACCTAACCATTTTTTTCGTGCCTGGGTACGAAGATTTACCCACCTATTTTGCAGAAAATCAGGTGCGAGTGGTGG CTTCCCTGCCCTGTTATTTAGAAGATAACGTCGATCGCCAACGGGGTGCGGGAGTGTACCAAGATTCCATTGCGGCCCTA CAAAAATTAAATGCCTTGGGTTATGGTCGAGATCCCGCCCTAGTCTTGGATTTAGTTTACAATCCGCCCGTGCCCCGAAA CCAAGACTTTTCCCTCACGCCCAATCAAGCGGCCCTAGAACAGGATTACAAAGCTTATTTAGCACGCCATTTTCAAATTC AGTTTAATCACCTGTTTACGATCACAAATTTACCCATTGGCCGCGTAAAAAATTATCTCCAGGCCCACGCGCTCTATAAA CCCTATCTCAGCTTTTTGGCGGCACATCACAACGGGACGACAGTGCCTAATCTCATGTGTCGTAGCCAGCTTTCTGTGGA TTATGAAGGCAATATTTTCGATTGTGATTTTAACCAGATGGAATCTCTCCCAGCCCGCACTCCCGACGGCCAACCGGTAA CGGTGCGGCACCTCCTAGAGGCAGAATCCTTAGATGTCATTGAAACGGTGGCGACGAAACCCTATTGTTATGGTTGCACA GCGGGAAGTGGCTCGAGTTGTGGTGGTGCTTTGAGCTAA
Upstream 100 bases:
>100_bases AGATTACCAGCTCACCCAACTGACTGAAGACGCCGCCTGTTGTCGCACCGATAGTTGCTGTTAACTAAAAATTCATCCCT GTTCTGTTATCCCAATCACC
Downstream 100 bases:
>100_bases GAGACTATCCACTGAATCATTAGGGGTGACTAGCGCGCAATTTTTCTGCTAGTTAATCTGGTCAGATTGCGGCTTGCTGG GGTAAACGCGAAAACTTGCT
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEICAQLIQLIRTFPQIQTVDLT GGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYEDLPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAAL QKLNALGYGRDPALVLDLVYNPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLEAESLDVIETVATKPYCYGCT AGSGSSCGGALS
Sequences:
>Translated_332_residues MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEICAQLIQLIRTFPQIQTVDLT GGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYEDLPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAAL QKLNALGYGRDPALVLDLVYNPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLEAESLDVIETVATKPYCYGCT AGSGSSCGGALS >Mature_332_residues MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEICAQLIQLIRTFPQIQTVDLT GGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYEDLPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAAL QKLNALGYGRDPALVLDLVYNPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLEAESLDVIETVATKPYCYGCT AGSGSSCGGALS
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36604; Mature: 36604
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEI CCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCHHHCCCHHH CAQLIQLIRTFPQIQTVDLTGGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYED HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCHH LPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAALQKLNALGYGRDPALVLDLVY HHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEE NPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHH PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLE HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHH AESLDVIETVATKPYCYGCTAGSGSSCGGALS HCCHHHHHHHHCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEI CCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCHHHCCCHHH CAQLIQLIRTFPQIQTVDLTGGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYED HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCHH LPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAALQKLNALGYGRDPALVLDLVY HHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEE NPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHH PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLE HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHH AESLDVIETVATKPYCYGCTAGSGSSCGGALS HCCHHHHHHHHCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA