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The map label for this gene is appC [H]

Identifier: 170078064

GI number: 170078064

Start: 1527983

End: 1529092

Strand: Direct

Name: appC [H]

Synonym: SYNPCC7002_A1455

Alternate gene names: 170078064

Gene position: 1527983-1529092 (Clockwise)

Preceding gene: 170078063

Following gene: 170078066

Centisome position: 50.8

GC content: 54.14

Gene sequence:

>1110_bases
ATGGATTGGTGGCGCAAACTTCGAAATAATACCCTGGCGCGTTTGGGCGCAATTATCCTGATCACCTTTTATGTCCTCGT
CATTGGTGCTGATTTTTTTGCCCCCTATGACCCCTATGTGTCCCAGGCAGATGGTTCTTTAATGCCGCCCACAGCGATCC
ACTGGCGCAATGGTACCCCCCATGTTTATCCCACCAGCCAGGGGCCGACGGATCTCGACACGGGCGATCGCCAACTGATT
GTTGATACCGATAACCCCCAACCGCTGCGCCTCTTTGTGAAAGGCGATCCTTACCAACTATTCCAGATCAAATTGCCCGT
GCCCCCGACCTTCGAGGAAAAAATTGTCTTTCCGGGCATCCGGGGCGATCGCCATTTATTTGGGGTGGTCGGCGAGGCCC
GCTTTAATCTCCTCGGCACCGACGAACAGGGGCGCGATCAATTTAGCCGCTTACTCCATGGGGGCCGCATTAGCCTGTTC
ATTGGCCTGGTGGGGATTGTTATTTCCTTTCCCTTGGGGATGCTCATCGGTGGCATTTCTGGCTATTTTGGCGGCTGGAT
CGATGCGGTCTTGATGCGCTTTGTGGAAGTGTTGATGACTATTCCGGGGATTTATCTCCTCGTTTCCCTGGCGGCGATTC
TGCCCGCGAGTTTAACCAGCGCCCAGCGATTCCTCTTGATTGTGCTGATTACCTCGTTCATTAGCTGGTCTGGCCTGGCG
CGGGTGATCCGGGGTCAAGTGCTCTCGATTAAAAACCAAGAATTTGTTCAGGCGGCCCAAGCAACGGGGGGGCGATCGCT
CTACATCATCACCAAACATATCCTGCCCCAAACGGCGAGCTATGCGATTATCTCCGCAACCCTCGCCGTACCAGGATTTA
TCATTGCCGAATCGGTATTGAGCTTGATTGGCCTCGGCATTCAACAGCCCGACCCCAGTTGGGGCAATCTGCTCTCCCTA
AGTACCAATGCTTCTATTCTGGTCTTACAACCTTGGCTGGTGTGGTCGCCGGCCATTTTGATTATCGTTACGGTGCTAGC
CTTTAACCTGCTCGGTGACGGGCTACGGGATGCCCTCGATCCAAAGAGCCTCCAAAACCGCCAAGATTAG

Upstream 100 bases:

>100_bases
TTTGCCGAGGGCTATGACTCCCAGCTTGCCGCCGCGATCGAGTATCTGCAGGCATTAGAATGAGGGGACACAATTATTTT
TGGCAACCCTGGCAGTAACT

Downstream 100 bases:

>100_bases
ACCCTGTTGCGACTAGCCGCTAGGGTGTATTGATTTAAGAAAACGAAAGACTATTGTGAATCCTGGGGTGATTGTTCGTG
GCGATGTAACCCTGGGATGT

Product: oligopeptide transport system permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MDWWRKLRNNTLARLGAIILITFYVLVIGADFFAPYDPYVSQADGSLMPPTAIHWRNGTPHVYPTSQGPTDLDTGDRQLI
VDTDNPQPLRLFVKGDPYQLFQIKLPVPPTFEEKIVFPGIRGDRHLFGVVGEARFNLLGTDEQGRDQFSRLLHGGRISLF
IGLVGIVISFPLGMLIGGISGYFGGWIDAVLMRFVEVLMTIPGIYLLVSLAAILPASLTSAQRFLLIVLITSFISWSGLA
RVIRGQVLSIKNQEFVQAAQATGGRSLYIITKHILPQTASYAIISATLAVPGFIIAESVLSLIGLGIQQPDPSWGNLLSL
STNASILVLQPWLVWSPAILIIVTVLAFNLLGDGLRDALDPKSLQNRQD

Sequences:

>Translated_369_residues
MDWWRKLRNNTLARLGAIILITFYVLVIGADFFAPYDPYVSQADGSLMPPTAIHWRNGTPHVYPTSQGPTDLDTGDRQLI
VDTDNPQPLRLFVKGDPYQLFQIKLPVPPTFEEKIVFPGIRGDRHLFGVVGEARFNLLGTDEQGRDQFSRLLHGGRISLF
IGLVGIVISFPLGMLIGGISGYFGGWIDAVLMRFVEVLMTIPGIYLLVSLAAILPASLTSAQRFLLIVLITSFISWSGLA
RVIRGQVLSIKNQEFVQAAQATGGRSLYIITKHILPQTASYAIISATLAVPGFIIAESVLSLIGLGIQQPDPSWGNLLSL
STNASILVLQPWLVWSPAILIIVTVLAFNLLGDGLRDALDPKSLQNRQD
>Mature_369_residues
MDWWRKLRNNTLARLGAIILITFYVLVIGADFFAPYDPYVSQADGSLMPPTAIHWRNGTPHVYPTSQGPTDLDTGDRQLI
VDTDNPQPLRLFVKGDPYQLFQIKLPVPPTFEEKIVFPGIRGDRHLFGVVGEARFNLLGTDEQGRDQFSRLLHGGRISLF
IGLVGIVISFPLGMLIGGISGYFGGWIDAVLMRFVEVLMTIPGIYLLVSLAAILPASLTSAQRFLLIVLITSFISWSGLA
RVIRGQVLSIKNQEFVQAAQATGGRSLYIITKHILPQTASYAIISATLAVPGFIIAESVLSLIGLGIQQPDPSWGNLLSL
STNASILVLQPWLVWSPAILIIVTVLAFNLLGDGLRDALDPKSLQNRQD

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=227, Percent_Identity=41.8502202643172, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1787054, Length=225, Percent_Identity=39.1111111111111, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1787760, Length=225, Percent_Identity=38.6666666666667, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1789964, Length=272, Percent_Identity=34.9264705882353, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789889, Length=227, Percent_Identity=30.8370044052863, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788505, Length=238, Percent_Identity=32.7731092436975, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787549, Length=229, Percent_Identity=30.5676855895196, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40440; Mature: 40440

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWWRKLRNNTLARLGAIILITFYVLVIGADFFAPYDPYVSQADGSLMPPTAIHWRNGTP
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCCCC
HVYPTSQGPTDLDTGDRQLIVDTDNPQPLRLFVKGDPYQLFQIKLPVPPTFEEKIVFPGI
CEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCEECCCC
RGDRHLFGVVGEARFNLLGTDEQGRDQFSRLLHGGRISLFIGLVGIVISFPLGMLIGGIS
CCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GYFGGWIDAVLMRFVEVLMTIPGIYLLVSLAAILPASLTSAQRFLLIVLITSFISWSGLA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVIRGQVLSIKNQEFVQAAQATGGRSLYIITKHILPQTASYAIISATLAVPGFIIAESVL
HHHHCHHHCCCCHHHHHHHHCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHCHHHHHHHHH
SLIGLGIQQPDPSWGNLLSLSTNASILVLQPWLVWSPAILIIVTVLAFNLLGDGLRDALD
HHHCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PKSLQNRQD
CHHHCCCCC
>Mature Secondary Structure
MDWWRKLRNNTLARLGAIILITFYVLVIGADFFAPYDPYVSQADGSLMPPTAIHWRNGTP
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCCCC
HVYPTSQGPTDLDTGDRQLIVDTDNPQPLRLFVKGDPYQLFQIKLPVPPTFEEKIVFPGI
CEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCEECCCC
RGDRHLFGVVGEARFNLLGTDEQGRDQFSRLLHGGRISLFIGLVGIVISFPLGMLIGGIS
CCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GYFGGWIDAVLMRFVEVLMTIPGIYLLVSLAAILPASLTSAQRFLLIVLITSFISWSGLA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVIRGQVLSIKNQEFVQAAQATGGRSLYIITKHILPQTASYAIISATLAVPGFIIAESVL
HHHHCHHHCCCCHHHHHHHHCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHCHHHHHHHHH
SLIGLGIQQPDPSWGNLLSLSTNASILVLQPWLVWSPAILIIVTVLAFNLLGDGLRDALD
HHHCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PKSLQNRQD
CHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]