| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is aat [H]
Identifier: 170078062
GI number: 170078062
Start: 1526805
End: 1527392
Strand: Direct
Name: aat [H]
Synonym: SYNPCC7002_A1453
Alternate gene names: 170078062
Gene position: 1526805-1527392 (Clockwise)
Preceding gene: 170078061
Following gene: 170078063
Centisome position: 50.76
GC content: 50.34
Gene sequence:
>588_bases ATGATCAGCCGTTTTAATCTGCCAGCAATTTTAGAAGGATATTCCCAGGGCTATTTTCTGATGGCGGATGAGCAACAGCA TTTGGGTTGGTATTCGAGTCGGCAACGGACTTTGATTCCCCTAGATGGTCGGTTTCGTTATCCCAAATCCTTGAGGCGAT CGCTCAATCAACAGATTTTTACCCCCAAAATTAACCAAGCCTTTGAGGCGGTGTGTGCCGGCTGTGCCAACCGGGACGTG ACCTGGATTTCGCCGGAATTACTAGACATTTATCGGGCGTTGCACCGGGCGGGGTGGGCCCACAGTTTTGAAACCTGGCG GGGGGATCAATTAGCTGGGGGGATTTTAGGCATCGCCATTGGTGGAGCCTTTATCGGGGAGTCGATGTTTTTTCAAATTC CCAATGGTTCCAAGGTGGCAATGGTTCTTTTAGTCGAACATCTGCGGCGACAAGGCTTTATCCTGTTTGATGCCCAGTTG CAAAATCCGCACCTAGAGCGATTTGGTTCCTACGTTATTGATAACCAGGATTATCGACGGTTGCTGGCCCAGGCAGTGCG TTTGCGGTGTCAGTTTGCGCCGGATTAA
Upstream 100 bases:
>100_bases TGATCTCATCGAGACGGTGCGGGGCATTGGTTATCGCCTCAAGACCTAAACGCCAGGGCGATCGCCTGGTACAGTTGAAA AATTCCGTCGTGGGCAATGT
Downstream 100 bases:
>100_bases AGAAGGGGAAAGATCTTTTTATAATTAAGGTGAGATTTCTTCGGCAATGGATTGAATGATGGCTTCCCTTGATGATTTGC TACGGGATTTAGAAAATCAA
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MISRFNLPAILEGYSQGYFLMADEQQHLGWYSSRQRTLIPLDGRFRYPKSLRRSLNQQIFTPKINQAFEAVCAGCANRDV TWISPELLDIYRALHRAGWAHSFETWRGDQLAGGILGIAIGGAFIGESMFFQIPNGSKVAMVLLVEHLRRQGFILFDAQL QNPHLERFGSYVIDNQDYRRLLAQAVRLRCQFAPD
Sequences:
>Translated_195_residues MISRFNLPAILEGYSQGYFLMADEQQHLGWYSSRQRTLIPLDGRFRYPKSLRRSLNQQIFTPKINQAFEAVCAGCANRDV TWISPELLDIYRALHRAGWAHSFETWRGDQLAGGILGIAIGGAFIGESMFFQIPNGSKVAMVLLVEHLRRQGFILFDAQL QNPHLERFGSYVIDNQDYRRLLAQAVRLRCQFAPD >Mature_195_residues MISRFNLPAILEGYSQGYFLMADEQQHLGWYSSRQRTLIPLDGRFRYPKSLRRSLNQQIFTPKINQAFEAVCAGCANRDV TWISPELLDIYRALHRAGWAHSFETWRGDQLAGGILGIAIGGAFIGESMFFQIPNGSKVAMVLLVEHLRRQGFILFDAQL QNPHLERFGSYVIDNQDYRRLLAQAVRLRCQFAPD
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=197, Percent_Identity=32.994923857868, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 22352; Mature: 22352
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRFNLPAILEGYSQGYFLMADEQQHLGWYSSRQRTLIPLDGRFRYPKSLRRSLNQQIF CCCCCCCHHHHHCCCCCEEEEECCHHHCCHHCCCCCEEEECCCCCCCCHHHHHHHHHHHC TPKINQAFEAVCAGCANRDVTWISPELLDIYRALHRAGWAHSFETWRGDQLAGGILGIAI CCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHCCCCCHHCHHHHHHH GGAFIGESMFFQIPNGSKVAMVLLVEHLRRQGFILFDAQLQNPHLERFGSYVIDNQDYRR HHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCEEECCHHHHH LLAQAVRLRCQFAPD HHHHHHHHHHCCCCC >Mature Secondary Structure MISRFNLPAILEGYSQGYFLMADEQQHLGWYSSRQRTLIPLDGRFRYPKSLRRSLNQQIF CCCCCCCHHHHHCCCCCEEEEECCHHHCCHHCCCCCEEEECCCCCCCCHHHHHHHHHHHC TPKINQAFEAVCAGCANRDVTWISPELLDIYRALHRAGWAHSFETWRGDQLAGGILGIAI CCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHCCCCCHHCHHHHHHH GGAFIGESMFFQIPNGSKVAMVLLVEHLRRQGFILFDAQLQNPHLERFGSYVIDNQDYRR HHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCEEECCHHHHH LLAQAVRLRCQFAPD HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA