| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is yggE [C]
Identifier: 170078042
GI number: 170078042
Start: 1504916
End: 1505581
Strand: Direct
Name: yggE [C]
Synonym: SYNPCC7002_A1433
Alternate gene names: 170078042
Gene position: 1504916-1505581 (Clockwise)
Preceding gene: 170078038
Following gene: 170078043
Centisome position: 50.03
GC content: 57.21
Gene sequence:
>666_bases ATGTTGTTCCTGGGGGGAACCTCTGGGGCGATCGCCGAAGAACTATTGCGCACGATCACTGTCACGGGGCGCGGCGAAGA AGCCATTGCCACGAGTCTTTCTGAAGTACGCCTTGGGGTCGAGGTGCGGGGGGCGACGGCAACCCAAGTCCAGGCAGATA TCGCCAAGCGCAGTAACCAAGTGGTGGATTTTCTCAAGTCCAAAAATGTCGCCAAGCTCACCACCACGGGCATTAATCTC CAGCCGGAATATGATTACAACAATGGCGATCGCCGCCTCATCGGTTACTTGGCCACCAATACAGTGAGCTTTGAAGTGCC CACCGCCCAAGCCGGGAGCCTGATGGATGAAGCTGTCAAAGTCGGAGCAACCCGCATTGATGGGATTTCCTTCCGGGCCA CCGAAGCCGCCCTCGCTGAAGCAGAAAAAACCGCCCTCGCTGAAGCCGCCCAGGATGCGCGCACCCAGGCCCAAACTGTC CTCGGTGCCTTGGGTTTGAGTCCCCAGGAAATTGTCCAAATCCAGGTCAATGGGGCGACGCCGCCAACCCCCATTTTTAA AACCATGGATACGGCACGAATCGCCTTCGAAAGTGCAGCGCCTTCTCCGGTAGAAGGGGGTGAACAGACGGTGAATGCTT CCGTAACCCTGACGATCCGTTACTAA
Upstream 100 bases:
>100_bases TAGAGCGTCAAACACAATTGTCTCTGTGATCTTGCACCTGTGTGTAGGAGTATGAAAAAAAATGCAACTGAAAAAATTGT TTGTCCCATTATTGGCGGGA
Downstream 100 bases:
>100_bases CACCCTGCTTTTTGGGCTAAATTACGCTTAAATCTAGGGGCGATCGCCTTGTGGGATAGGGGCGAAACTTGAGGGAATGT TAGATCTAATCAAACTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MLFLGGTSGAIAEELLRTITVTGRGEEAIATSLSEVRLGVEVRGATATQVQADIAKRSNQVVDFLKSKNVAKLTTTGINL QPEYDYNNGDRRLIGYLATNTVSFEVPTAQAGSLMDEAVKVGATRIDGISFRATEAALAEAEKTALAEAAQDARTQAQTV LGALGLSPQEIVQIQVNGATPPTPIFKTMDTARIAFESAAPSPVEGGEQTVNASVTLTIRY
Sequences:
>Translated_221_residues MLFLGGTSGAIAEELLRTITVTGRGEEAIATSLSEVRLGVEVRGATATQVQADIAKRSNQVVDFLKSKNVAKLTTTGINL QPEYDYNNGDRRLIGYLATNTVSFEVPTAQAGSLMDEAVKVGATRIDGISFRATEAALAEAEKTALAEAAQDARTQAQTV LGALGLSPQEIVQIQVNGATPPTPIFKTMDTARIAFESAAPSPVEGGEQTVNASVTLTIRY >Mature_221_residues MLFLGGTSGAIAEELLRTITVTGRGEEAIATSLSEVRLGVEVRGATATQVQADIAKRSNQVVDFLKSKNVAKLTTTGINL QPEYDYNNGDRRLIGYLATNTVSFEVPTAQAGSLMDEAVKVGATRIDGISFRATEAALAEAEKTALAEAAQDARTQAQTV LGALGLSPQEIVQIQVNGATPPTPIFKTMDTARIAFESAAPSPVEGGEQTVNASVTLTIRY
Specific function: Unknown
COG id: COG2968
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23228; Mature: 23228
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLGGTSGAIAEELLRTITVTGRGEEAIATSLSEVRLGVEVRGATATQVQADIAKRSNQ CEEECCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHEECEEECCCCHHHHHHHHHHHHHH VVDFLKSKNVAKLTTTGINLQPEYDYNNGDRRLIGYLATNTVSFEVPTAQAGSLMDEAVK HHHHHHCCCCEEEEECCCCEEECCCCCCCCEEEEEEEEECEEEEEECCCHHHHHHHHHHH VGATRIDGISFRATEAALAEAEKTALAEAAQDARTQAQTVLGALGLSPQEIVQIQVNGAT HCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCC PPTPIFKTMDTARIAFESAAPSPVEGGEQTVNASVTLTIRY CCCCHHHCCHHHHEEECCCCCCCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure MLFLGGTSGAIAEELLRTITVTGRGEEAIATSLSEVRLGVEVRGATATQVQADIAKRSNQ CEEECCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHEECEEECCCCHHHHHHHHHHHHHH VVDFLKSKNVAKLTTTGINLQPEYDYNNGDRRLIGYLATNTVSFEVPTAQAGSLMDEAVK HHHHHHCCCCEEEEECCCCEEECCCCCCCCEEEEEEEEECEEEEEECCCHHHHHHHHHHH VGATRIDGISFRATEAALAEAEKTALAEAAQDARTQAQTVLGALGLSPQEIVQIQVNGAT HCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCC PPTPIFKTMDTARIAFESAAPSPVEGGEQTVNASVTLTIRY CCCCHHHCCHHHHEEECCCCCCCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA