| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078001
Identifier: 170078001
GI number: 170078001
Start: 1452077
End: 1452547
Strand: Reverse
Name: 170078001
Synonym: SYNPCC7002_A1387
Alternate gene names: NA
Gene position: 1452547-1452077 (Counterclockwise)
Preceding gene: 170078003
Following gene: 170077999
Centisome position: 48.29
GC content: 49.89
Gene sequence:
>471_bases ATGAGTTTTGAAATTCCAGAGTCCGTCAAAGTCTGGTCCCAGTTTGGTCACCCCATTATGATGTGGGTCTTGTTTGGGCT TTGTATTTATGCGATGTACCTTGGCATTCAGATCCGTCGCATCCGGAGTGCCGACAAAGAAGTCCGCAAAGAATTGGTCA AAAAACAATTTAACTTCAAGCACCACCAGGTGGGTTCGGCCCTGCTGGCATTTATGGTTTTGGGCACCATTGGCGGGATG GCCGTCACCTACATCAACAACGGGAAATTATTCGTTGGCCCCCACCTCCTCGTCGGTTTAGGGATGACCGGTTTAATTGC CATCTCAGCCTCTTTAGTGCCTTTTATGCAACGGGGCAACGACTTGGCGCGGGTAACCCACATTGGCTTGAATACGTTGC TGGTGGCTCTGTTTGGTTGGCAGGCCGTGAGTGGTATGGATATTGTGACGAAAATCATTGGCCGTCTGTAG
Upstream 100 bases:
>100_bases CCCAAGCCGTCCCAGATTCTAGTTGATAATTTCCATTTACCAGGGGAATCGGTTAAGTTTTATAAAGATTTCAGCATCCT GAACGAAGGAGAAAACACCC
Downstream 100 bases:
>100_bases GTAGCGTCCAGGCAAAATTTTCGGGGGGGACAGGGGCACTGTCCTCTTTTTTGTGGGTTTCTGGATTGTCTTCGGGGGGA CGAATGACGGTACAACCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSFEIPESVKVWSQFGHPIMMWVLFGLCIYAMYLGIQIRRIRSADKEVRKELVKKQFNFKHHQVGSALLAFMVLGTIGGM AVTYINNGKLFVGPHLLVGLGMTGLIAISASLVPFMQRGNDLARVTHIGLNTLLVALFGWQAVSGMDIVTKIIGRL
Sequences:
>Translated_156_residues MSFEIPESVKVWSQFGHPIMMWVLFGLCIYAMYLGIQIRRIRSADKEVRKELVKKQFNFKHHQVGSALLAFMVLGTIGGM AVTYINNGKLFVGPHLLVGLGMTGLIAISASLVPFMQRGNDLARVTHIGLNTLLVALFGWQAVSGMDIVTKIIGRL >Mature_155_residues SFEIPESVKVWSQFGHPIMMWVLFGLCIYAMYLGIQIRRIRSADKEVRKELVKKQFNFKHHQVGSALLAFMVLGTIGGMA VTYINNGKLFVGPHLLVGLGMTGLIAISASLVPFMQRGNDLARVTHIGLNTLLVALFGWQAVSGMDIVTKIIGRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17274; Mature: 17143
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEIPESVKVWSQFGHPIMMWVLFGLCIYAMYLGIQIRRIRSADKEVRKELVKKQFNFK CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH HHQVGSALLAFMVLGTIGGMAVTYINNGKLFVGPHLLVGLGMTGLIAISASLVPFMQRGN HHHHHHHHHHHHHHHHHCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC DLARVTHIGLNTLLVALFGWQAVSGMDIVTKIIGRL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure SFEIPESVKVWSQFGHPIMMWVLFGLCIYAMYLGIQIRRIRSADKEVRKELVKKQFNFK CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH HHQVGSALLAFMVLGTIGGMAVTYINNGKLFVGPHLLVGLGMTGLIAISASLVPFMQRGN HHHHHHHHHHHHHHHHHCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC DLARVTHIGLNTLLVALFGWQAVSGMDIVTKIIGRL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA