| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077991
Identifier: 170077991
GI number: 170077991
Start: 1438458
End: 1439432
Strand: Reverse
Name: 170077991
Synonym: SYNPCC7002_A1377
Alternate gene names: NA
Gene position: 1439432-1438458 (Counterclockwise)
Preceding gene: 170077994
Following gene: 170077989
Centisome position: 47.85
GC content: 51.59
Gene sequence:
>975_bases ATGTTGGATGTGGCGATTATTGGGGCAGGCTTAGCGGGGATTCATTGTGGCCGAAAAATTAAACAGGCAGGCCAACAGGT CGCACTTTTCGATAAATCCCGTGGTGTGGGTGGTCGCCTCGCAACCAGACGGATTGCAGCACAGCCCCTTGACCATGGTT TACCCTACTGGGAGATTTTAGGAGCCCATACAGCAGCTTTAACGGAAACTTTAGTTGCAGCCGATCTTTTAAAACCCTGG TCGGTGGCAACAAGCGATCGCCTTGATCCAGAGATTTGGCAAATCCTTGCGGGGGAACAACGGTGGATGGTGCCAGCGGG AATGACGGCGATCGCCAAATATTTAGCTCAAGATTTAACGATTCATCGGAGTCAACGCCTGATCCACCTCGAAGAACGTC CGGGCCATTGGCGACTGGCCTTTGAACAAGGGGAAACCGTCTGCGCGAGGCAGGTGGTTTTAGCGCTACCCCTGCCCCAG GTGATCACACTCACTTATTCTTTTATTACCGTGCGCGATCGCCTTGCGGAAATTTTTTACGCTCCAGCCCTCTCTCTCAT GGTTGGTTATGACCAGTTTGATTGGAGATTTCCCTGGCAAGCACTCCGCCTCAGCCAACATCCCCGATGGCGCACAATTA GCTACGAAGGCCAAAAGCGATCGCCTGGGAATTTCACCCTAGTCTGTCAAACGACGGGAAATTTTGCCCAAAATTATTTA GAGACAGCGGATTTAACCACCGTCGCCATCACGCTATTGGATGAATTACAAAATCTTTTTACCTTACCGACACCCCAATG GTGGCAGATCCAGCGTTGGCGCTATGCTCTCCCTGCAATGAACTATGGCCAAGCCTATTATCGTTTTGCCACGGACTCTC CCCTGATCGCCTGTGGAGATTGGTGTTTGGGAAATGGTATCGAAGGGGCGATCGCCGCTGGTTTGGCCACTGGTGATGCG CTTTTATCAGCGTAA
Upstream 100 bases:
>100_bases CATCATCTCCACGCTTGATGCTGCCTATTGTAATCTAGCTTTTCGCTGGTCAACTTTTTACAATGGGGCGCGGACAGAGA ACGTCAGGAAATGTGATCAA
Downstream 100 bases:
>100_bases ATTCTATAAGTTTATGGGGAGTGAGTCGCCTCAGTCATGGTTTGTTCGAGTTCCTGGGCGAGCTGTTGCTGTTGTTCGTT AACCTTTAGGAACTGGTGAA
Product: FAD dependent oxidoreductase, putative
Products: NA
Alternate protein names: Transmembrane Protein; Amine Oxidase; NAD/FAD-Dependent Oxidoreductase-Like Protein; Amine Oxidase Flavin-Containing; Flavin-Containing Amine-Oxidoreductase; NAD/FAD-Dependent Oxidoreductase; Deoxyribodipyrimidine Photolyase; NAD/Fad-Dependent Oxidoreductase Protein; FAD Dependent Oxidoreductase Domain Protein; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MLDVAIIGAGLAGIHCGRKIKQAGQQVALFDKSRGVGGRLATRRIAAQPLDHGLPYWEILGAHTAALTETLVAADLLKPW SVATSDRLDPEIWQILAGEQRWMVPAGMTAIAKYLAQDLTIHRSQRLIHLEERPGHWRLAFEQGETVCARQVVLALPLPQ VITLTYSFITVRDRLAEIFYAPALSLMVGYDQFDWRFPWQALRLSQHPRWRTISYEGQKRSPGNFTLVCQTTGNFAQNYL ETADLTTVAITLLDELQNLFTLPTPQWWQIQRWRYALPAMNYGQAYYRFATDSPLIACGDWCLGNGIEGAIAAGLATGDA LLSA
Sequences:
>Translated_324_residues MLDVAIIGAGLAGIHCGRKIKQAGQQVALFDKSRGVGGRLATRRIAAQPLDHGLPYWEILGAHTAALTETLVAADLLKPW SVATSDRLDPEIWQILAGEQRWMVPAGMTAIAKYLAQDLTIHRSQRLIHLEERPGHWRLAFEQGETVCARQVVLALPLPQ VITLTYSFITVRDRLAEIFYAPALSLMVGYDQFDWRFPWQALRLSQHPRWRTISYEGQKRSPGNFTLVCQTTGNFAQNYL ETADLTTVAITLLDELQNLFTLPTPQWWQIQRWRYALPAMNYGQAYYRFATDSPLIACGDWCLGNGIEGAIAAGLATGDA LLSA >Mature_324_residues MLDVAIIGAGLAGIHCGRKIKQAGQQVALFDKSRGVGGRLATRRIAAQPLDHGLPYWEILGAHTAALTETLVAADLLKPW SVATSDRLDPEIWQILAGEQRWMVPAGMTAIAKYLAQDLTIHRSQRLIHLEERPGHWRLAFEQGETVCARQVVLALPLPQ VITLTYSFITVRDRLAEIFYAPALSLMVGYDQFDWRFPWQALRLSQHPRWRTISYEGQKRSPGNFTLVCQTTGNFAQNYL ETADLTTVAITLLDELQNLFTLPTPQWWQIQRWRYALPAMNYGQAYYRFATDSPLIACGDWCLGNGIEGAIAAGLATGDA LLSA
Specific function: Unknown
COG id: COG3380
COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36162; Mature: 36162
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVAIIGAGLAGIHCGRKIKQAGQQVALFDKSRGVGGRLATRRIAAQPLDHGLPYWEIL CCEEEEECCCHHHHHCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCHHHCCCCHHHHH GAHTAALTETLVAADLLKPWSVATSDRLDPEIWQILAGEQRWMVPAGMTAIAKYLAQDLT HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH IHRSQRLIHLEERPGHWRLAFEQGETVCARQVVLALPLPQVITLTYSFITVRDRLAEIFY HCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH APALSLMVGYDQFDWRFPWQALRLSQHPRWRTISYEGQKRSPGNFTLVCQTTGNFAQNYL HHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHH ETADLTTVAITLLDELQNLFTLPTPQWWQIQRWRYALPAMNYGQAYYRFATDSPLIACGD HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEECC WCLGNGIEGAIAAGLATGDALLSA HHCCCCCCHHHHHHHHCCHHHHCC >Mature Secondary Structure MLDVAIIGAGLAGIHCGRKIKQAGQQVALFDKSRGVGGRLATRRIAAQPLDHGLPYWEIL CCEEEEECCCHHHHHCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCHHHCCCCHHHHH GAHTAALTETLVAADLLKPWSVATSDRLDPEIWQILAGEQRWMVPAGMTAIAKYLAQDLT HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH IHRSQRLIHLEERPGHWRLAFEQGETVCARQVVLALPLPQVITLTYSFITVRDRLAEIFY HCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH APALSLMVGYDQFDWRFPWQALRLSQHPRWRTISYEGQKRSPGNFTLVCQTTGNFAQNYL HHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHH ETADLTTVAITLLDELQNLFTLPTPQWWQIQRWRYALPAMNYGQAYYRFATDSPLIACGD HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEECC WCLGNGIEGAIAAGLATGDALLSA HHCCCCCCHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA