| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is tap [C]
Identifier: 170077986
GI number: 170077986
Start: 1431067
End: 1433775
Strand: Reverse
Name: tap [C]
Synonym: SYNPCC7002_A1372
Alternate gene names: 170077986
Gene position: 1433775-1431067 (Counterclockwise)
Preceding gene: 170077987
Following gene: 170077985
Centisome position: 47.66
GC content: 50.68
Gene sequence:
>2709_bases ATGCCGCCCAGCACCACTGATTATTCAAAGGAGTATGCTGAGGCCCAGAAGGCCTATTATCAGAATAATTTGCCTGAAGC AGAGGCGATCGCCAATCGGTTACTCAAAGATTACCCGGACGATCCCCATTTGCTCCTTTTAAGCGGCCATATTTCCCTTG GTTTACAAGATTTAGGGCGGGCCTCCGCGTTCTACCATCGGGTTTTAGATGTCACCAACCAGCGGGACTACCATGAATAC GCTCGCCAAGGTTTGACCCAGGTCAATGCCTACAGCGATCAAGTCAATGGTCACCGGGAAACCAGCGGTGGACAGCCGAC CCTCACCCAGCCAGAAGATTATCCGGTTGCAGCAGAATACAACTCCCCAGAAAACTTTGTCACAGCAGCAGGGGAACAAT CAATTTCGGCGGATGATTATTCAGAACAATGGGCAGAACCAGAGTTGCCCCTGAGAAATTTCCCGGAAGATGAAGAAACT TTTTTAGTGCCCCACCCTGGCGATCGCTCCCCTGAACCAGGTTTAAATCAGTCCCTTAATGATCCTTTTTTCGAGGCAGA GGCTGGCGAATTCATTGAATTTAACGAAGACGAATTGGTTGAATTCGATAGTGCGGCTGGCCTAGAAGAAGACGGAGATT TCCTAGGGAGCGAAGATACGTCTCCTTTCGATTTAGATTGGTCACCGACCCATGAAAATGGCAGAATTTCAGCAGATCAA GACCATTTTGATGCAGTGGATACTGCACCACTCGGCTTTGAAAGTGAGTCCCCCACTTGGCTCGAAAATCCTCCTTTAGC CGATGCAGACGCATTGACATTTGATGAGCCAGCGCACCCAAGTTTTGCACCTGACTCCCTCTCCCCTGATGAGGCGGCAG ATTTTGACGATGAAATTAGCTTGGGTAGCCTTGGGGCAGAACTATTTGATGAAGAACCAGAAGCGCCACCAAAACAGGAT GAAGGGGGCTTTTTAGAGGAATTTGGCATTCTCAACGAACAGGATCTAGATGATTTTGGTGATCTCGGTTCGGATATTCT CGATGATGACCAAAAAATGCCGGATACAGGTCTGTTTGAAGCGCCCCTAGAAACACCGACGACCTCAGGGGAGTTTAATT TTGATGATTTTCCCGAAGAATTGGGCCTCACCGAAGACGACAGCCTATTTATCACCCTAGGGGAGGATAGTCTCTCTGGC GGTCTAGGGACAGATTTTACTGTTTCTGATAAACCCCAAGAAATTGTCGCGGAAAACCCCAAAGGTTATTTGGCTTGGTT TGAAAATGTGCCTCTCCAGAAAAAACAATTGTTCACTGCGACTGGCGCTGCTGCTGCATCGGTGATCGCCACTTTGATTG TGACAGTGAGCGTATTTCAAACCACCCCAGCCGAACAACGGCCCCAAACCCTCTGGCCCGTGGCCAAAACAGGTTTACTC ACTAGCTTATTGGCCGGGGCAGCCAGCTTTGGTACGACCCTCTTTTTTGGGAAGTTAACAACTCGGCAGATCAAACGTAG CACTGACAACCTACAAAACCAGTTCGACGCGGTTTCCCAGGGGAATCTCAATGTCAAAGCAACGGTTTTTGCGGAGGATG AGTTTGGTGCCTTAGCCACGGGCTTTAATAAAATGGCCCGGGTTATTTTAAATACCACCAGTGAGGCCCAGCGGCGAGCC GAAGAAACAGAACAGTCCAAAGAAGACCTCCAGCGCCAGGTGATCCGCCTCCTTGATGATGTGGAAGGGGCCGCCCGGGG AGACTTTACCGTCCAAGCAGAGGTCACAGCCGATGTTTTAGGGGCCGTCGCCGACGCCTTTAACCTCACCATTCAAAATC TCCGGGAAATTGTTCAACAGGTTAAACAAGCGGCGCGCCAGGTGAATAAAAATGCTGCCGATAGTGAATCCTTTGCCCGG GGTCTATCCAGTGATGCTCTCCGTCAAGCTGAAGAATTGGCCGTTACCCTCAACTCGGTACAGATGATGACGGATTCAAT TCAGCGGGTTGCTGAAAACGCCCGGGAAGCTGAAGAAGTCGCTCGTACCGCTTCGAGTACAGCCCTCAAGGGGGGGGAAT CCGTAGAGCACACCGTAGCCGGGATTTTACAGATTCGAGAAACGGTGGCCGAAACAGCCCGTAAGGTAAAACGCCTGGCT GAGTCTTCCCAAGAAATTTCGAAAATTGTCGCGGTGGTCTCCCAGATTGCGTCCCGTACAAACCTCTTGGCGTTGAATGC ATCCATTGAGGCGGCCCGGGCTGGGGAGTCAGGCAAAGGCTTTGCCATTGTGGCCGACGAAGTCCGTCAGTTGGCAGACC GTTCTGCAAAAGCCCTGAAAGAAATCGAGCAAATTGTTTTACAAATTCAAAGTGAAACAAGTTCGGTAATGACCGCAATG GAAGAGGGTACCCAGCAGGTTATTGACGGTACCAAACGGGCTGAACAAGCGAAGCAATCCCTAGAGGACATTATTCAGGT ATCAAACCGTATTGATGCCCTCGTGCGCTCAATTACGGCGGATACCGTTGAACAGCGGGAGAATTCTCGTGCCGTGGCCC AGGTGATGCAATCGGTAGAGTTAACCGCTCAGGAAACTTCCCGAGAATCTCAACGGGTGGCCGGATCGTTACAGAAATTG GTGGGCATCGCCCGGGATCTGTTGGCTTCTGTGGAGCGATTCCGCATAGAATCCACGGATGAGGCGTAA
Upstream 100 bases:
>100_bases AAAGTAGATTACATTAAAAATACGTTTTGCATCCGTTAAAAAGTTTGTGCAGCGCTCAGTAAGATAATCCTAAAAATGTG CCAGTCCAGGAGGGAACCCG
Downstream 100 bases:
>100_bases TATGATTGGGCAACGGCGTTCATGCCAATAAAATTTACATCAAGTTTGGCGATCGCCTTTTCCCTTTGCCTTTTTTTTAT TTTCAGTTGTCCCATCCGAT
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 902; Mature: 901
Protein sequence:
>902_residues MPPSTTDYSKEYAEAQKAYYQNNLPEAEAIANRLLKDYPDDPHLLLLSGHISLGLQDLGRASAFYHRVLDVTNQRDYHEY ARQGLTQVNAYSDQVNGHRETSGGQPTLTQPEDYPVAAEYNSPENFVTAAGEQSISADDYSEQWAEPELPLRNFPEDEET FLVPHPGDRSPEPGLNQSLNDPFFEAEAGEFIEFNEDELVEFDSAAGLEEDGDFLGSEDTSPFDLDWSPTHENGRISADQ DHFDAVDTAPLGFESESPTWLENPPLADADALTFDEPAHPSFAPDSLSPDEAADFDDEISLGSLGAELFDEEPEAPPKQD EGGFLEEFGILNEQDLDDFGDLGSDILDDDQKMPDTGLFEAPLETPTTSGEFNFDDFPEELGLTEDDSLFITLGEDSLSG GLGTDFTVSDKPQEIVAENPKGYLAWFENVPLQKKQLFTATGAAAASVIATLIVTVSVFQTTPAEQRPQTLWPVAKTGLL TSLLAGAASFGTTLFFGKLTTRQIKRSTDNLQNQFDAVSQGNLNVKATVFAEDEFGALATGFNKMARVILNTTSEAQRRA EETEQSKEDLQRQVIRLLDDVEGAARGDFTVQAEVTADVLGAVADAFNLTIQNLREIVQQVKQAARQVNKNAADSESFAR GLSSDALRQAEELAVTLNSVQMMTDSIQRVAENAREAEEVARTASSTALKGGESVEHTVAGILQIRETVAETARKVKRLA ESSQEISKIVAVVSQIASRTNLLALNASIEAARAGESGKGFAIVADEVRQLADRSAKALKEIEQIVLQIQSETSSVMTAM EEGTQQVIDGTKRAEQAKQSLEDIIQVSNRIDALVRSITADTVEQRENSRAVAQVMQSVELTAQETSRESQRVAGSLQKL VGIARDLLASVERFRIESTDEA
Sequences:
>Translated_902_residues MPPSTTDYSKEYAEAQKAYYQNNLPEAEAIANRLLKDYPDDPHLLLLSGHISLGLQDLGRASAFYHRVLDVTNQRDYHEY ARQGLTQVNAYSDQVNGHRETSGGQPTLTQPEDYPVAAEYNSPENFVTAAGEQSISADDYSEQWAEPELPLRNFPEDEET FLVPHPGDRSPEPGLNQSLNDPFFEAEAGEFIEFNEDELVEFDSAAGLEEDGDFLGSEDTSPFDLDWSPTHENGRISADQ DHFDAVDTAPLGFESESPTWLENPPLADADALTFDEPAHPSFAPDSLSPDEAADFDDEISLGSLGAELFDEEPEAPPKQD EGGFLEEFGILNEQDLDDFGDLGSDILDDDQKMPDTGLFEAPLETPTTSGEFNFDDFPEELGLTEDDSLFITLGEDSLSG GLGTDFTVSDKPQEIVAENPKGYLAWFENVPLQKKQLFTATGAAAASVIATLIVTVSVFQTTPAEQRPQTLWPVAKTGLL TSLLAGAASFGTTLFFGKLTTRQIKRSTDNLQNQFDAVSQGNLNVKATVFAEDEFGALATGFNKMARVILNTTSEAQRRA EETEQSKEDLQRQVIRLLDDVEGAARGDFTVQAEVTADVLGAVADAFNLTIQNLREIVQQVKQAARQVNKNAADSESFAR GLSSDALRQAEELAVTLNSVQMMTDSIQRVAENAREAEEVARTASSTALKGGESVEHTVAGILQIRETVAETARKVKRLA ESSQEISKIVAVVSQIASRTNLLALNASIEAARAGESGKGFAIVADEVRQLADRSAKALKEIEQIVLQIQSETSSVMTAM EEGTQQVIDGTKRAEQAKQSLEDIIQVSNRIDALVRSITADTVEQRENSRAVAQVMQSVELTAQETSRESQRVAGSLQKL VGIARDLLASVERFRIESTDEA >Mature_901_residues PPSTTDYSKEYAEAQKAYYQNNLPEAEAIANRLLKDYPDDPHLLLLSGHISLGLQDLGRASAFYHRVLDVTNQRDYHEYA RQGLTQVNAYSDQVNGHRETSGGQPTLTQPEDYPVAAEYNSPENFVTAAGEQSISADDYSEQWAEPELPLRNFPEDEETF LVPHPGDRSPEPGLNQSLNDPFFEAEAGEFIEFNEDELVEFDSAAGLEEDGDFLGSEDTSPFDLDWSPTHENGRISADQD HFDAVDTAPLGFESESPTWLENPPLADADALTFDEPAHPSFAPDSLSPDEAADFDDEISLGSLGAELFDEEPEAPPKQDE GGFLEEFGILNEQDLDDFGDLGSDILDDDQKMPDTGLFEAPLETPTTSGEFNFDDFPEELGLTEDDSLFITLGEDSLSGG LGTDFTVSDKPQEIVAENPKGYLAWFENVPLQKKQLFTATGAAAASVIATLIVTVSVFQTTPAEQRPQTLWPVAKTGLLT SLLAGAASFGTTLFFGKLTTRQIKRSTDNLQNQFDAVSQGNLNVKATVFAEDEFGALATGFNKMARVILNTTSEAQRRAE ETEQSKEDLQRQVIRLLDDVEGAARGDFTVQAEVTADVLGAVADAFNLTIQNLREIVQQVKQAARQVNKNAADSESFARG LSSDALRQAEELAVTLNSVQMMTDSIQRVAENAREAEEVARTASSTALKGGESVEHTVAGILQIRETVAETARKVKRLAE SSQEISKIVAVVSQIASRTNLLALNASIEAARAGESGKGFAIVADEVRQLADRSAKALKEIEQIVLQIQSETSSVMTAME EGTQQVIDGTKRAEQAKQSLEDIIQVSNRIDALVRSITADTVEQRENSRAVAQVMQSVELTAQETSRESQRVAGSLQKLV GIARDLLASVERFRIESTDEA
Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788194, Length=286, Percent_Identity=33.2167832167832, Blast_Score=124, Evalue=3e-29, Organism=Escherichia coli, GI2367378, Length=281, Percent_Identity=32.7402135231317, Blast_Score=123, Evalue=4e-29, Organism=Escherichia coli, GI1788195, Length=260, Percent_Identity=31.9230769230769, Blast_Score=116, Evalue=8e-27, Organism=Escherichia coli, GI1787690, Length=296, Percent_Identity=32.7702702702703, Blast_Score=112, Evalue=9e-26, Organism=Escherichia coli, GI1789453, Length=244, Percent_Identity=29.9180327868852, Blast_Score=103, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003018 - InterPro: IPR003660 - InterPro: IPR016132 [H]
Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 98361; Mature: 98230
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS00330 HEMOLYSIN_CALCIUM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSTTDYSKEYAEAQKAYYQNNLPEAEAIANRLLKDYPDDPHLLLLSGHISLGLQDLGR CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHCHHHHHH ASAFYHRVLDVTNQRDYHEYARQGLTQVNAYSDQVNGHRETSGGQPTLTQPEDYPVAAEY HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECC NSPENFVTAAGEQSISADDYSEQWAEPELPLRNFPEDEETFLVPHPGDRSPEPGLNQSLN CCCCHHEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC DPFFEAEAGEFIEFNEDELVEFDSAAGLEEDGDFLGSEDTSPFDLDWSPTHENGRISADQ CCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DHFDAVDTAPLGFESESPTWLENPPLADADALTFDEPAHPSFAPDSLSPDEAADFDDEIS CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LGSLGAELFDEEPEAPPKQDEGGFLEEFGILNEQDLDDFGDLGSDILDDDQKMPDTGLFE HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCC APLETPTTSGEFNFDDFPEELGLTEDDSLFITLGEDSLSGGLGTDFTVSDKPQEIVAENP CCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCC KGYLAWFENVPLQKKQLFTATGAAAASVIATLIVTVSVFQTTPAEQRPQTLWPVAKTGLL CCEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH TSLLAGAASFGTTLFFGKLTTRQIKRSTDNLQNQFDAVSQGNLNVKATVFAEDEFGALAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHH GFNKMARVILNTTSEAQRRAEETEQSKEDLQRQVIRLLDDVEGAARGDFTVQAEVTADVL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH GAVADAFNLTIQNLREIVQQVKQAARQVNKNAADSESFARGLSSDALRQAEELAVTLNSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH QMMTDSIQRVAENAREAEEVARTASSTALKGGESVEHTVAGILQIRETVAETARKVKRLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ESSQEISKIVAVVSQIASRTNLLALNASIEAARAGESGKGFAIVADEVRQLADRSAKALK HHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHH EIEQIVLQIQSETSSVMTAMEEGTQQVIDGTKRAEQAKQSLEDIIQVSNRIDALVRSITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTVEQRENSRAVAQVMQSVELTAQETSRESQRVAGSLQKLVGIARDLLASVERFRIESTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EA CC >Mature Secondary Structure PPSTTDYSKEYAEAQKAYYQNNLPEAEAIANRLLKDYPDDPHLLLLSGHISLGLQDLGR CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHCHHHHHH ASAFYHRVLDVTNQRDYHEYARQGLTQVNAYSDQVNGHRETSGGQPTLTQPEDYPVAAEY HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECC NSPENFVTAAGEQSISADDYSEQWAEPELPLRNFPEDEETFLVPHPGDRSPEPGLNQSLN CCCCHHEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC DPFFEAEAGEFIEFNEDELVEFDSAAGLEEDGDFLGSEDTSPFDLDWSPTHENGRISADQ CCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DHFDAVDTAPLGFESESPTWLENPPLADADALTFDEPAHPSFAPDSLSPDEAADFDDEIS CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LGSLGAELFDEEPEAPPKQDEGGFLEEFGILNEQDLDDFGDLGSDILDDDQKMPDTGLFE HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCC APLETPTTSGEFNFDDFPEELGLTEDDSLFITLGEDSLSGGLGTDFTVSDKPQEIVAENP CCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCC KGYLAWFENVPLQKKQLFTATGAAAASVIATLIVTVSVFQTTPAEQRPQTLWPVAKTGLL CCEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH TSLLAGAASFGTTLFFGKLTTRQIKRSTDNLQNQFDAVSQGNLNVKATVFAEDEFGALAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHH GFNKMARVILNTTSEAQRRAEETEQSKEDLQRQVIRLLDDVEGAARGDFTVQAEVTADVL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH GAVADAFNLTIQNLREIVQQVKQAARQVNKNAADSESFARGLSSDALRQAEELAVTLNSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH QMMTDSIQRVAENAREAEEVARTASSTALKGGESVEHTVAGILQIRETVAETARKVKRLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ESSQEISKIVAVVSQIASRTNLLALNASIEAARAGESGKGFAIVADEVRQLADRSAKALK HHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHH EIEQIVLQIQSETSSVMTAMEEGTQQVIDGTKRAEQAKQSLEDIIQVSNRIDALVRSITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTVEQRENSRAVAQVMQSVELTAQETSRESQRVAGSLQKLVGIARDLLASVERFRIESTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]