| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077983
Identifier: 170077983
GI number: 170077983
Start: 1428793
End: 1429389
Strand: Direct
Name: 170077983
Synonym: SYNPCC7002_A1369
Alternate gene names: NA
Gene position: 1428793-1429389 (Clockwise)
Preceding gene: 170077982
Following gene: 170077990
Centisome position: 47.5
GC content: 50.75
Gene sequence:
>597_bases ATGCCTGTGACGTTTGAATTGGCTCCTTGGCGATCGCCCCTAGCCCGGGCCTTACACCGGAATAAAAGTCAGCCCCACCA CCGCTTTTTTCAGTTGGCCACCGTAACGCCGACAGGAAAACCCAGGAATCGCACGGTGGTTTTTCGGGGGTTCCTCGAAG GAAGCAATGATCTCAAAATCATTACGGATCAGCGCAGTGACAAAATAAACCACCTCACCACTAGCTCCGACGCCGAAATT GCTTGGTATTTCACCAAAACCCGGGAGCAATTCCGCTTTAGTGGTCAGATTAAGCTGGTTACAGCAGCAAGTCCGCCATC ACGACTAAATCGCGCTAGACAACAGACCTGGCAAGCCCTTTCGGATGAAGCCCGGGCTCAATTTCTCTGGCCCCAGCCTG GCGATCGCCGTAGTGAAAATTTAGCTGATTTCCAGCCAACTGCAGTGAATAATCAAGAGCCTGTTTCTAATTTCGTGCTT CTCCTGTTTCAAGTGACAAAGGTCGATCACCTCGAACTGCGGGGCAATCCCCAAAATCGCTTTTTATATGACCTCACAGC CGACGGTACTTGGCAGCAAAAAACAGTTAATCCCTAG
Upstream 100 bases:
>100_bases GGTTTCTGAATGTTGGCAAGTGGCTCAAAAGCGACGTCAGTTAGAAGGAGAGGCCTAATTATTCGATACTGGATTATGCT TGGCCCTACCGTAAACAATC
Downstream 100 bases:
>100_bases GGGGAAGAAAGCCATATTTTTGTAAAATAGCCTGACCTTTTTGACCCAGAATAAAATTGATAAAAAGTTGCCCTTGGGTT TGGTTGGGTGAGACTTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Pyridoxamine Phosphate Oxidase
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPVTFELAPWRSPLARALHRNKSQPHHRFFQLATVTPTGKPRNRTVVFRGFLEGSNDLKIITDQRSDKINHLTTSSDAEI AWYFTKTREQFRFSGQIKLVTAASPPSRLNRARQQTWQALSDEARAQFLWPQPGDRRSENLADFQPTAVNNQEPVSNFVL LLFQVTKVDHLELRGNPQNRFLYDLTADGTWQQKTVNP
Sequences:
>Translated_198_residues MPVTFELAPWRSPLARALHRNKSQPHHRFFQLATVTPTGKPRNRTVVFRGFLEGSNDLKIITDQRSDKINHLTTSSDAEI AWYFTKTREQFRFSGQIKLVTAASPPSRLNRARQQTWQALSDEARAQFLWPQPGDRRSENLADFQPTAVNNQEPVSNFVL LLFQVTKVDHLELRGNPQNRFLYDLTADGTWQQKTVNP >Mature_197_residues PVTFELAPWRSPLARALHRNKSQPHHRFFQLATVTPTGKPRNRTVVFRGFLEGSNDLKIITDQRSDKINHLTTSSDAEIA WYFTKTREQFRFSGQIKLVTAASPPSRLNRARQQTWQALSDEARAQFLWPQPGDRRSENLADFQPTAVNNQEPVSNFVLL LFQVTKVDHLELRGNPQNRFLYDLTADGTWQQKTVNP
Specific function: Unknown
COG id: COG5135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22841; Mature: 22710
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTFELAPWRSPLARALHRNKSQPHHRFFQLATVTPTGKPRNRTVVFRGFLEGSNDLKI CCEEEECCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEE ITDQRSDKINHLTTSSDAEIAWYFTKTREQFRFSGQIKLVTAASPPSRLNRARQQTWQAL EECCCCCCCCEEECCCCCEEEEEEECCCHHEEECCEEEEEEECCCHHHHHHHHHHHHHHH SDEARAQFLWPQPGDRRSENLADFQPTAVNNQEPVSNFVLLLFQVTKVDHLELRGNPQNR HHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCC FLYDLTADGTWQQKTVNP EEEEEECCCCCCCCCCCC >Mature Secondary Structure PVTFELAPWRSPLARALHRNKSQPHHRFFQLATVTPTGKPRNRTVVFRGFLEGSNDLKI CEEEECCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEE ITDQRSDKINHLTTSSDAEIAWYFTKTREQFRFSGQIKLVTAASPPSRLNRARQQTWQAL EECCCCCCCCEEECCCCCEEEEEEECCCHHEEECCEEEEEEECCCHHHHHHHHHHHHHHH SDEARAQFLWPQPGDRRSENLADFQPTAVNNQEPVSNFVLLLFQVTKVDHLELRGNPQNR HHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCC FLYDLTADGTWQQKTVNP EEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA