| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077982
Identifier: 170077982
GI number: 170077982
Start: 1428427
End: 1428750
Strand: Direct
Name: 170077982
Synonym: SYNPCC7002_A1368
Alternate gene names: NA
Gene position: 1428427-1428750 (Clockwise)
Preceding gene: 170077976
Following gene: 170077983
Centisome position: 47.49
GC content: 50.31
Gene sequence:
>324_bases ATGTTTTCTCCAGAACCCGCCGATGAAAAGCAACTTTTAAAGGCTGTACTGGCCCCGCTTTTGGATGATTTTCTTTATTG GTTTGATCTATCCCTAACGGCCCTCGAAAAAAAATCCTTAAGTTTTATGGCCCCCGCCGAGCAGGAAGACCTAATCGCCC GCATTCGCCAGGCCCAGGGGGAGGTGATGGCGACCAAGTCTCTTTTCCAAGCCACCGATGGCAATGCTGGAGTCGATGTT CAGGTGTTGATGCCCTGGCACCAATTGGTTTCTGAATGTTGGCAAGTGGCTCAAAAGCGACGTCAGTTAGAAGGAGAGGC CTAA
Upstream 100 bases:
>100_bases TTGTTAAGGTTGCTTAATATTCAAGGAAATCATCCTCGACAGCGGCGATCGCCTCAAAATGTTAAGATATGTGAAGAAAG TCTCATTTTCAAAAATATCT
Downstream 100 bases:
>100_bases TTATTCGATACTGGATTATGCTTGGCCCTACCGTAAACAATCATGCCTGTGACGTTTGAATTGGCTCCTTGGCGATCGCC CCTAGCCCGGGCCTTACACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MFSPEPADEKQLLKAVLAPLLDDFLYWFDLSLTALEKKSLSFMAPAEQEDLIARIRQAQGEVMATKSLFQATDGNAGVDV QVLMPWHQLVSECWQVAQKRRQLEGEA
Sequences:
>Translated_107_residues MFSPEPADEKQLLKAVLAPLLDDFLYWFDLSLTALEKKSLSFMAPAEQEDLIARIRQAQGEVMATKSLFQATDGNAGVDV QVLMPWHQLVSECWQVAQKRRQLEGEA >Mature_107_residues MFSPEPADEKQLLKAVLAPLLDDFLYWFDLSLTALEKKSLSFMAPAEQEDLIARIRQAQGEVMATKSLFQATDGNAGVDV QVLMPWHQLVSECWQVAQKRRQLEGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019728 [H]
Pfam domain/function: PF10792 DUF2605 [H]
EC number: NA
Molecular weight: Translated: 12079; Mature: 12079
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSPEPADEKQLLKAVLAPLLDDFLYWFDLSLTALEKKSLSFMAPAEQEDLIARIRQAQG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHC EVMATKSLFQATDGNAGVDVQVLMPWHQLVSECWQVAQKRRQLEGEA HHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFSPEPADEKQLLKAVLAPLLDDFLYWFDLSLTALEKKSLSFMAPAEQEDLIARIRQAQG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHC EVMATKSLFQATDGNAGVDVQVLMPWHQLVSECWQVAQKRRQLEGEA HHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]