Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077981

Identifier: 170077981

GI number: 170077981

Start: 1427573

End: 1428235

Strand: Reverse

Name: 170077981

Synonym: SYNPCC7002_A1367

Alternate gene names: NA

Gene position: 1428235-1427573 (Counterclockwise)

Preceding gene: 170077984

Following gene: 170077980

Centisome position: 47.48

GC content: 51.89

Gene sequence:

>663_bases
GTGAAATACGAAATCCGCTATAAACCCGCCTTTGCTTGTCTATTTGTCACCCTCGAACCCGGCGAACAGGTCACAGCCGA
ATCCGGTGCAATGGTCAGCATGGATGGTGGAATCTTAATGAAAACTGAATTTTCGGGGGGATTTTTCCCGGCGATTCTCC
GTCGGTTATTTGGGGGAGAATCCCTGTTTGTGAATGTTTATCGCAACACGAGTCAGCGGCCCCAGACCGTCATTTTAACC
CAGTCAATGGTGGGTGATATCCACCGCATTGACCTGTCCCAGGGGCCGATCTGTTTTCAGCCCGGTGCTTACATTGCCCA
TACCCCCGGCGCAAAAATGGGAATCCGTTGGGCTGGCTTTGCCAGTTGGTTTGCGGGGGAAGGTCTCTTCAAGCTGCAAT
TCACAGGTAGTGGCCGGGTCTTTTACGGGTGCTACGGCGGCATCATTGAAAAACACATCAAGGGTGAATTTATCGTCGAT
AACAGCCACCTCGTTGCCTACGATCCGGGCATCACCATGAATATTCGGATGTCTGGGGGCTTATTTGGTTCTCTCACCTC
CGGCGAAGGCCTGGTGAATAAACTCAAAGGCCGTGGCCGAATCTACCTCCAATCGCGGAGTGTGTCAGGTCTTGTGGGCT
TTTTACGTCCAAAATGTCGTTAG

Upstream 100 bases:

>100_bases
CCTTAACAAACATTTCTTCACTCCCATTGCCCTGCTAAAAATAAGGGGAATTAGCTTGTATTGGGCTAGTTTATTCAAAC
TCTTATCAGGTAGAGTCACG

Downstream 100 bases:

>100_bases
GGGGTAGCTATGGAAATTAAACTCTTACATCAACCAGATAATGCGATCGCCCATGTCACCCTCGACGCTGGGGAAGAAAT
CATTGCCCAAGCCGGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGESLFVNVYRNTSQRPQTVILT
QSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGFASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVD
NSHLVAYDPGITMNIRMSGGLFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR

Sequences:

>Translated_220_residues
MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGESLFVNVYRNTSQRPQTVILT
QSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGFASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVD
NSHLVAYDPGITMNIRMSGGLFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR
>Mature_220_residues
MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGESLFVNVYRNTSQRPQTVILT
QSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGFASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVD
NSHLVAYDPGITMNIRMSGGLFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 24085; Mature: 24085

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGE
CCEEEEECCEEEEEEEEECCCCEEECCCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCC
SLFVNVYRNTSQRPQTVILTQSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGF
EEEEEEEECCCCCCCEEEEEHHHHCCEEEEECCCCCEEECCCCEEEECCCCCCCEEEECH
ASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVDNSHLVAYDPGITMNIRMSGG
HHHHCCCCEEEEEEECCCEEEEEEHHHHHHHHCCCCEEEECCEEEEECCCEEEEEEECCC
LFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR
EEEEECCCCHHHHHHCCCCEEEEEECCCCHHHHCCCCCCC
>Mature Secondary Structure
MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGE
CCEEEEECCEEEEEEEEECCCCEEECCCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCC
SLFVNVYRNTSQRPQTVILTQSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGF
EEEEEEEECCCCCCCEEEEEHHHHCCEEEEECCCCCEEECCCCEEEECCCCCCCEEEECH
ASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVDNSHLVAYDPGITMNIRMSGG
HHHHCCCCEEEEEEECCCEEEEEEHHHHHHHHCCCCEEEECCEEEEECCCEEEEEEECCC
LFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR
EEEEECCCCHHHHHHCCCCEEEEEECCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA